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Journal of Neuroscience, Vol 15, 1132-1143, Copyright © 1995 by Society for Neuroscience
Cloning and characterization of a calcium channel alpha 1 subunit from Drosophila melanogaster with similarity to the rat brain type D isoform
W Zheng, G Feng, D Ren, DF Eberl, F Hannan, M Dubald and LM Hall
State University of New York at Buffalo, Department of Biochemical Pharmacology 14260.
We report the complete sequence of a calcium channel alpha 1 subunit cDNA
cloned from a Drosophila head cDNA library. This cDNA encodes a deduced
protein containing 2516 amino acids with a predicted molecular weight of
276,493. The deduced protein shares many features with vertebrate homologs,
including four repeat structures, each containing six transmembrane
domains, a conserved ion selectivity filter region between transmembrane
domains 5 and 6, and an EF hand in the carboxy tail. The Drosophila subunit
has unusually long initial amino and terminal carboxy tails. The region
corresponding to the last transmembrane domain (IVS6) and the adjacent
cytoplasmic domain has been postulated to form a phenylalkylamine-binding
site in vertebrate calcium channels. This region is conserved in the
Drosophila sequence, while domains thought to be involved in
dihydropyridine binding show numerous changes. The Drosophila subunit
exhibits 78.3% sequence similarity to the rat brain type D calcium channel
alpha 1 subunit, and so has been designated as a Drosophila melanogaster
calcium channel alpha 1 type D subunit (Dmca1D). In situ hybridization
shows that Dmca1D is highly expressed in the embryonic nervous system.
Northern analysis shows that Dmca1D cDNA hybridizes to three size classes
of mRNA (9.5, 10.2, and 12.5 kb) in heads, but only two classes (9.5 and
12.5 kb) in bodies and legs. PCR analysis suggests that the Dmca1D message
undergoes alternative splicing with more heterogeneity appearing in head
and embryonic extracts than in bodies and legs.
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