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Volume 16, Number 23,
Issue of December 1, 1996
pp. 7437-7446
Copyright ©1996 Society for Neuroscience
Ultrastructural Localization of Dendritic Messenger RNA in Adult
Rat Hippocampus
Maryann E. Martone1,
John A. Pollock2,
Ying
Zhang Jones1, and
Mark H. Ellisman1
1 National Center for Microscopy and Imaging Research
at San Diego, Department of Neurosciences, University of California San
Diego, San Diego, California 92093-0608, and 2 Department
of Biological Sciences, Carnegie Mellon University, Pittsburgh,
Pennsylvania 15213
ABSTRACT
INTRODUCTION
MATERIALS AND METHODS
RESULTS
DISCUSSION
FOOTNOTES
REFERENCES
ABSTRACT
An ultrastructural examination of mRNA within adult rat CA1
hippocampal dendrites was conducted using two different methods. The
messages for the and forms of the calcium-calmodulin-dependent protein kinase II were localized in ultracryosections using
silver-intensified gold detection of isoform-specific oligonucleotide
probes. Labeling for both isoforms was observed within the cell bodies
and proximal dendrites of pyramidal neurons, but only the form was
observed in more distal dendrites. Unfortunately, the morphological
preservation of the tissue was not sufficient to determine the
localization of labeling relative to subcellular features such as
denritic spines. To address this issue, a preembedding peroxidase-based method was developed, resulting in better preservation of the neuropil.
The total population of polyadenylated [poly(A)] mRNA was localized
in hippocampus using a biotinylated poly(dT) probe. Poly(A) mRNA was
present in the nucleus and throughout the cell body of all hippocampal
cells and within isolated dendrites and glial processes within the
neuropil. Within pyramidal neurons, labeling was distributed in a
longitudinal pattern in proximal apical dendrites. More distally, the
amount of labeling diminished, and smaller foci of labeling were
observed, particularly near the plasma membrane. Concentrated labeling
was present at the base of dendritic spines and, less frequently, near
synapses onto the dendritic shaft. These results suggest that dendritic
mRNA is found in the vicinity of postsynaptic sites and provide
additional evidence that local protein synthesis may play an important
role in establishing and maintaining synaptic specializations.
Key words:
in situ hybridization;
electron
microscopy;
CAMKII;
polyadenylated mRNA;
dendritic spines;
fluorescence in situ hybridization
INTRODUCTION
The bulk of protein synthesis within neurons
occurs in the perikaryon. However, increasing evidence suggests that
dendrites also support the synthesis of some proteins in the mammalian
nervous system. Dendritic protein synthesis was first proposed based on morphological evidence that dendrites, unlike most axons, contain polyribosomes (Steward and Levy, 1982 ) and on in situ
hybridization studies localizing mRNAs for MAP2 and
calcium-calmodulin-dependent protein kinase II (CAMKII) within
dendrites (Garner et al., 1988 ; Burgin et al., 1990 ). Additional mRNAs
have subsequently been found within dendritic processes (Furuichi et
al., 1993 ; Landry et al., 1994 ; Miyashiro et al., 1994 ) and
synaptosomes (Chicurel et al., 1993 ; Rao and Steward, 1993 ). Protein
synthesis has been demonstrated in dendrites isolated from their cell
bodies in culture (Torre and Steward, 1992 ), synaptosomal preparations
(Rao and Steward, 1991 ; Weiler and Greenough, 1993 ), and dendritic
fields of hippocampal slices (Phillips et al., 1987 ; Feig and Lipton, 1993 ).
Subcellular localization of mRNAs is an efficient mechanism for
targeting proteins to their appropriate cellular locations and for
allowing rapid and local control of protein synthesis within a
particular cellular domain (Wilhelm and Vale, 1993 ). Dendrites are
highly specialized subcellular compartments supporting the majority of
synapses to a given neuron. Although the number of dendritic mRNAs
conclusively identified is small, many of the molecules for which they
encode are involved in signal transduction (Steward, 1995 ), indicating
that these proteins could be synthesized near the sites where they are
used. The hypothesis that dendritic mRNA functions in the development
and maintenance of postsynaptic specializations is supported by
findings that dendritic polyribosomes and some mRNAs are particularly
numerous during periods of maximal synaptogenesis, e.g., during
development and after deafferentation (Steward and Fass, 1983 ; Steward
and Falk, 1986 ; Moriya and Tanaka, 1994 ) and that polyribosomes are
preferentially localized near synaptic sites (Steward and Levy, 1982 ;
Steward and Falk, 1986 ). The subsynaptic localization of polyribosomes
has led to the additional hypothesis that protein synthesis may be
regulated by synaptic activation allowing for local modification of
activated synapses (Steward and Banker, 1992 ; Weiler et al., 1994 ;
Steward, 1995 ).
Although the presence of mRNAs within synaptosomes suggests that a
population of mRNAs exists near synapses, direct ultrastructural analyses of dendritic mRNA distribution have not been performed. Such
analyses have been hampered by the lack of protocols combining sensitive detection methods with reasonable morphological preservation. We developed electron microscopic methods for the detection of mRNAs
within the dendrites of hippocampal cells. Our initial efforts focused
on the detection of specific messages for CAMKII isoforms. Using
colloidal gold labeling of ultracryosections, we could detect these
messages within hippocampal dendrites. A reasonably strong signal was
obtained, but the degree of morphological preservation was not
satisfactory for addressing the localization of mRNA relative to
synaptic inputs and other subcellular structures. To address this
issue, we employed a second method using a sensitive preembedding in situ hybridization technique to localize the total
population of polyadenylated [poly(A)] mRNA. This work has appeared
in abstract form (Martone et al., 1993 , 1995 ).
MATERIALS AND METHODS
Tissue
Sprague Dawley rats of both sexes, aged 14-30 d, were
anesthetized deeply with an anesthesia cocktail containing 50 mg/kg ketamine, 1 mg/kg rhompun, and 5 mg/kg acetopromazine in sterile saline
and perfused transcardially with oxygenated rat Ringer's solution
followed by a fixative solution consisting of 4% paraformaldehyde in
0.1 M PBS, pH 7.2, for light microscopic studies or 4%
paraformaldehyde/0.1% glutaraldehyde for electron microscopic studies.
All solutions were prepared in diethylpyrocarbonate-treated water.
For the ultracryosectioning experiment, small blocks of tissue
containing the hippocampus were cryoprotected for 1 hr each in 0.5 M sucrose in 0.1 M PBS containing 2%
paraformaldehyde, 1 M sucrose in PBS containing 0.5%
paraformaldehyde, and 2.3 M sucrose in PBS. Tissue blocks
were placed onto small aluminum screws and plunge-frozen in liquid
propane using a Reichart-Jung KF-80. Frozen tissue blocks were stored
in liquid nitrogen until cut.
For the preembedding protocol, blocks of tissue containing the
hippocampus were cut on a a vibratome at a thickness of 50 µm and
processed free-floating.
Probes
A cDNA probe to CAMKII was generated from a 3.8 kb cloned
restriction fragment corresponding to nucleotides 225-4010 of an -subunit cDNA provided to us by Dr. Paul Kelly (University of Texas
Health Science Center). The -subunit mRNA of CAMKII is ~5.3 kb
with ~1400 bp of coding sequence. CAMKII probe was labeled by PCR
amplification of the cloned insert through the use of the universal and
reverse vector primers in the presence of either biotin-dUTP or
digoxygenin-dUTP (80 ng template; 30% labeled dUTP; 70% dTTP; 6 min
at 94°C (first cycle), 1 min at 94°C, 90 sec at 60°C, 3 min at
72°C, with an additional 6 sec per cycle for 35 cycles). The PCR
product was restriction digested with EcoRI, gel-purified,
and recovered with glass milk (Geneclean; Bio 101, La Jolla, CA). A 600 bp fragment of the 3 -untranslated sequence was generally used as
probe.
Isoform-specific CAMKII and CAMKII oligonucleotide probes were
generated as described by Burgin et al. (1990) with the exception that
either biotin-dUTP or digoxygenin-dUTP was used instead of
[35S]dATP as a label in the terminal transferase
reaction.
The negative-control -DNA probe was generated by PCR, as described
above, using the Bacteriophage Lambda DNA template and primers provided
as control reagents in the Perkin-Elmer GeneAmp kit. This results in a
labeled probe, 500 bp long. The "no-probe" control consists of
hybridization with hybridization buffer alone.
For the localization of poly(A)-containing messenger RNA, a 50mer
poly(dT) oligonucleotide probe-tailed with biotin was kindly provided
by Dr. Sui Huang (Cold Spring Harbor Laboratories, Cold Spring Harbor,
NY). A similarly labeled poly(dA) probe was used a sense control.
Probes were diluted in a hybridization cocktail consisting of 2× SSC
buffer, 1 mg/ml tRNA, 10% dextran sulfate, and 25% formamide.
In situ hybridization protocol
Ultracryosections. The following is a modification of
the procedure used by Pollock and co-workers (1990, 1991).
Ultracryosections were cut at at thickness of 0.5-2.0 µm on a
Reichart Ultracut E with FC4E cryosectioning attachment. Cryosections
were picked up on a bead of 2.3 M sucrose and placed on
formvar-coated, gold thin-bar EM grids, and washed in PBS. Pretreatment
steps to render mRNA accessible to the probes included 0.1N HCl for 10 min, followed by 2× SSC at room temperature for 5 min, then rapid
heating to 70°C, followed by fixation in buffered 4%
paraformaldehyde/0.1% glutaraldehyde. The tissue was then washed in
PBS and subsequently exchanged with a 50% formamide-0.6 M
NaCl prehybridization buffer-lacking probe. The grids were then placed
on drops of hybridization probe at 0.5-1.0 ng/µl in hybridization
buffer. Hybridization was performed at 37°C overnight. Control
sections in which the probe was omitted from the hybridization buffer
or the sections treated with RNase before addition of probe were also
included. The sections were then washed in formamide wash buffer at
high stringency followed by washes in PBS.
Biotinylated RNA-DNA hybrids were detected with an anti-biotin primary
antibody, followed by secondary antibody conjugated with 1 nm colloidal
gold (Amersham, Arlington Heights, IL) and silver intensification (LI
Silver, NanoProbe, Stonybrook, NY). Digoxygenin-labeled probes were
detected using an unlabeled mouse anti-digoxygenin antibody (Boehringer
Mannheim, Indianapolis, IN) followed by goat anti-mouse IgG conjugated
to 1.4 nm colloidal gold (NanoProbe) and silver intensification.
Sections were viewed at 400 keV on a JEOL 4000EX intermediate-voltage
electron microscope. Pilot experiments were carried out at 1 MeV on a
JEOL high-voltage electron microscope (University of Colorado, Boulder,
CO).
Preembedding labeling of poly(A) mRNA. Vibratome sections
through the hippocampus were rinsed in PBS two times for 5 min followed by 5 min in PBS/0.1% Triton X-100, two times for 5 min in PBS, and two
times for 10 min in 2× SSC. Sections were hybridized overnight in
microcentrifuge tubes containing 4 ng/µl probe at 37°C in a water
bath. After hybridization, sections were washed three times for 10 min
each in 2× SSC at room temperature, one time for 30 min in 0.2× SSC
at 37°C, and three times for 10 min in 2× SSC at room temperature.
Control conditions included omission of the probe from the
hybridization buffer, substitution of a poly(dA) sense probe in place
of the antisense probe, or pretreatment of the sections with 100 ug/ml
RNase for 2 hr at 37°C before hybridization. Detection of the
biotinylated probe for electron microscopic localization was
accomplished using a multistep detection protocol adapted from McQuaid
and Allan (1992) . The following steps were used: (1) two 5 min washes
in PBS; (2) 30 min in a mouse monoclonal anti-biotin antibody
(Boehringer Mannheim) diluted 1:30 in PBS at 37°C; (3) three 5 min
washes in 1× PBS; (4) 10 min in biotinylated horse anti-mouse IgG
(Vector Labs, Burlingame, CA), diluted 1:100 in PBS; (5) 60 min in
streptavidin-horseradish peroxidase conjugate (Jackson Labs, West
Grove, PA) diluted 1:100; (6) six 5 min washes in PBS; (7) 10 min
incubation in 0.1 mg/ml 3-3 -diaminobenzidine (DAB) containing 0.008%
hydrogen peroxide; (8) three 5 min washes in PBS; (9) 10 min in 2%
glutaraldehyde; (10) three 5 min washes in PBS; (11) 30 min in 1%
osmium tetroxide; (12) two 10 min washes in PBS; (13) dehydration in an
ascending series of ethanol followed by 100% acetone; (14) flat
embedding in Durcopan ACM resin (Electron Microscopy Sciences, Fort
Washington, PA). Thin and semi-thin sections were cut on a Reichart
Ultracut E ultramicrotome, collected on grids, and viewed on a JEOL
100CX or 2000FX electron microscope or a 4000EX intermediate
high-voltage electron microscope. Most sections were viewed without
counterstaining with heavy metals so as not to obscure the DAB reaction
product. Some sections were counterstained with uranyl acetate and lead
citrate before viewing under the electron microscope.
For light microscopic observation, streptavidin conjugated to
fluorescein isothiocyanate was used in step 5 in place of the peroxidase conjugate. After rinsing in PBS, the sections were coverslipped in antifade medium without additional processing. Sections
were viewed on a BioRad MRC 1024 laser-scanning confocal microscope.
RESULTS
Localization of CAMKII mRNA in ultracryosections
Both the 600 bp cDNA probe and the isoform-specific
oligonucleotide probes resulted in labeling of pyramidal neurons in the CA1 region of hippocampus (Fig. 1). An example of a
pyramidal cell body labeled with the cDNA probe is shown in Figure
1A. Membrane contrast was poor, although subcellular
features such as the nucleus and the endoplasmic reticulum were
distinguishable (Fig. 1A,C). Control
experiments of "no-probe" treatment (Fig. 1C) or
nonspecific DNA (Fig. 1B) exhibited little
background and were used to show that a signal-to-noise ratio of the
density of silver-intensified gold particles was 10:1.
Fig. 1.
Localization of mRNA for CAMKII in 1-µm-thick
ultracryosections of CA1 pyramidal neurons hybridized with either the
600 bp cDNA probe (A) or the - or -specific probes
(D-G). A, Labeling with
the 600 bp CAMKII cDNA probe in a pyramidal cell body
(cb). Subcellular features such as the endoplasmic
reticulum (arrowhead) were visible in such sections,
although membrane contrast was poor. B, Control section
hybridized with a 500 bp fragment of bacteriophage . A small amount
of labeling is present within the cell body (cb).
C, Control section in which the probe was omitted from
the hybridization solution. Little gold labeling was observed in the
cell body (cb) or nucleus (n).
D, E, Labeling for the CAMKII mRNA in
the cell body and apical dendrite of a pyramidal neuron. A tracing of
the distribution of silver particles in a montage composed of four
micrographs is shown in E. A micrograph through the
portion of the dendrite indicated by the arrowhead is
shown in D; the arrowhead points to a
silver-intensified gold particle. Note that that labeling is fairly
evenly distributed throughout the apical dendrite. F,
G, The distribution of CAMKII mRNA in the apical
dendrite of a pyramidal neuron. A tracing of the distribution of silver
particles in a montage through the apical dendrite is shown in
G. Note that the labeling abruptly stops at a distance
of ~15 µm from the cell body. A micrograph through the region
indicated by the arrowhead is shown in F.
Scale bars: A-D, F, 1 µm; E, G, 10 µm.
[View Larger Version of this Image (97K GIF file)]
Dendritic labeling
Labeling for the 600 bp cDNA and both oligonucleotide probes was
observed within apical dendrites. However, distinct patterns of
dendritic labeling were observed for the and isoforms. Analysis
of dendritic labeling patterns was performed in tissue from two
separate experiments based on montages through the cell body and apical
dendrite. At least three dendrites were analyzed for each of the
isoform-specific probes. Labeling for the CAMKII isoform extended
into the apical dendrites and could be followed for a distance of
30-40 µm from the cell body (Fig.
1D,E). The intensity of signal
gradually diminished with increasing distance from the cell body, and
no labeling was observed within smaller-diameter isolated dendrites
within the neuropil. This same pattern of labeling was observed for the
600 bp probe. In contrast, when labeling for the CAMKII extended
into proximal dendrites, it abruptly ceased at a distance of ~15 µm
from the soma (Fig. 1F,G). Counts of the
silver-intensified gold particles indicated that a moderately strong
signal terminated within a linear distance of <1 µm. The manner in
which the CAMKII mRNA signal terminates is reminiscent of the
apparent restriction of mRNA transport into the axon initial segment
(Kleiman et al., 1994 ).
Localization of poly(A) containing mRNA
Although the labeling of ultracryosections proved to be fairly
sensitive, we were unable to examine the distribution of mRNA relative
to synaptic sites or other subcellular structures, because the degree
of ultrastructural preservation, particularly of the neuropil, was not
adequate. We therefore turned to a preembedding method using
peroxidase-based detection. Early attempts using the isoform-specific
oligonucleotide probes were not successful. Therefore, to increase the
likelihood of localizing mRNA within dendrites, we localized the total
population of poly(A)-containing mRNA using a poly(dT) oligonucleotide
probe. By using a multistep detection method developed by McQuaid and
Allan (1992) , we were able to observe a strong dendritic signal in
hippocampal pyramidal cells using both fluorescence and
peroxidase-based detection.
Light microscopy
At the light microscopic level, poly(A) mRNA was found abundantly
within the nucleus and cytoplasm of neurons and glial cells (Fig.
2A,C). In area CA1,
fluorescent labeling extended for >100 µm within the apical
dendrites of pyramidal cells. Within the nucleus, mRNA was distributed
in a spotty pattern consisting of four or more focal concentrations of
labeling, arranged in a ring around the nucleolus. The nucleolus and
region adjacent to the nuclear membrane were unlabeled. Only light
labeling of the cell bodies and nuclei was observed in the control
conditions (Fig. 2B,D).
Fig. 2.
Fluorescence in situ hybridization
of poly(A) mRNA in pyramidal neurons of area CA1. A,
C, Sections labeled for poly(A) mRNA. Labeling could be
followed within apical dendrites for a distance of >100 µm.
B, Control section hybridized with a poly(dA) sense probe. D, Control section in which no probe was included
in the hybridization cocktail. Scale bar, 20 µm.
[View Larger Version of this Image (121K GIF file)]
Electron microscopy
The pattern of labeling observed in peroxidase-labeled sections at
both the light and electron microscopic levels (Fig.
3A,B) was similar to that
observed with fluorescence. Labeling was highly reproducible from
experiment to experiment. Little labeling was observed in cell bodies
and dendrites in the control conditions in either the light microscope
(Fig. 3C,E) or electron microscope (Fig.
3D,F). However, a small amount of
punctate labeling was seen at the electron microscopic level within the
neuropil in all of the control conditions. The number of labeled
profiles was much lower in the control conditions than in the
experimental conditions. To quantify the amount of nonspecific
labeling, 10 fields of neuropil were photographed from the surface of
the experimental and each of the control conditions: 5 at a
magnification of 5000× and 5 at a magnification of 10,000×. These
photographs were analyzed blindly by one of the authors and the number
of labeled profiles counted. The results are presented in Table
1. Among the control conditions, the largest number of
labeled profiles were observed in the sense controls. The higher number
of labeled profiles in this control condition could represent
hybridization to poly(T) stretches within mRNA molecules.
Fig. 3.
Peroxidase labeling for poly(A) mRNA labeling in
area CA1 in experimental and control conditions at the light
microscopic (A, C, E) and
electron microscopic (B, D,
F) levels. A, B,
Pyramidal neurons labeled for poly(A) mRNA. At both the LM and EM
levels, staining was observed within cell bodies, nuclei, and apical
dendrites (a). C, D,
Pyramidal cell layer (pc) hybridized with the
sense probe. E, F, No probe control. In
neither control condition was labeling observed within the pyramidal
cell layer (pc) or apical dendrites
(a). All electron micrographs were taken from the
surface of the tissue. Scale bars: A, C,
E, 100 µm; B, D,
F, 2 µm.
[View Larger Version of this Image (163K GIF file)]
Table 1.
Number of labeled profiles seen in randomly selected
micrographs
| Condition |
0 labeled profiles |
1-2
labeled profiles |
3 labeled
profiles |
|
| Antisense |
0 |
0 |
10 |
| Sense |
3 |
3 |
4 |
| RNAse |
8 |
2 |
0 |
| No
probe |
6 |
4 |
0 |
|
Number of micrographs containing labeled profiles in each of the
experimental conditions. Ten micrographs were obtained from the surface
of tissue in the experimental and each of the control conditions.
Micrographs were grouped according to the number of profiles observed
(0, 1-2, or 3). The number of micrographs falling into each category
is reported for each condition.
|
|
Electron microscopic observation focused on area CA1 of the
hippocampus and were derived primarily from tissue from two animals that exhibited both good labeling and reasonable ultrastructural preservation. The heaviest labeling was observed within the nuclei and
cell bodies of pyramidal cells and other cells in the molecular layer
(Fig. 4). Within the cytoplasm, extensive punctate
labeling was present within ribosome-containing regions of the cell
soma (Fig. 4A,B). The Golgi
apparatus and mitochondria were not labeled (Fig.
4A). Within the nucleus, poly(A)-containing mRNA was
distributed in a prominent speckled pattern, as described previously by
Spector and colleagues in non-neuronal cells (Spector, 1993 ; Huang et al., 1994 ). The nucleoli and heterochromatin were unlabeled (Fig. 4A,B). The pattern of nuclear
staining appeared to differ between large and small cells. The speckles
were much larger, rounder, and more darkly labeled in large cells
compared with small cells, such as glia, in which staining was less
intense and formed more of a filigree pattern (Fig.
4B,E). In some cases, thin tracks of labeling were observed extending from the interior of the nucleus to
the nuclear membrane, and accumulations of label were observed on the
cytoplasmic side of the nuclear membrane (Fig. 4E,
arrow). This pattern of labeling was reminiscent of recent
results on poly(A) staining in the nucleus of cultured neurons, in
which poly(A) mRNA was observed extending from the interior of the
nucleus through the nuclear pores (Deerinck et al., 1994 ; Huang et al., 1994 ).
Fig. 4.
Ultrastructural localization of poly(A) mRNA in
cell bodies and dendrites of rat hippocampal cells. A,
Labeled pyramidal cell body. Both densely labeled foci and a more
diffuse background staining were observed in the nucleus, although
neither the nucleolus (n) nor the heterochromatin
(arrow) was labeled. Labeling was present in a finer
punctate pattern in the cytoplasm that was not associated with the
Golgi apparatus (g) or mitochondria.
B, Large neuron flanked on the left by a
smaller satellite cell. The nuclear speckles were larger and more
intensely labeled in the large neurons compared with smaller glial
cells. C, Axon initial segment of a labeled pyramidal
neuron (arrow). Labeling extended into the beginning
portion but then terminated. D, Pyramidal cell dendrite
(d). Labeling was distributed in a roughly
longitudinal pattern within heavily labeled dendrites. The
arrowhead points to a concentration of labeling
underneath a synaptic apposition onto the dendritic shaft.
E, Small, likely glial, cell showing the distribution of
poly(A) mRNA within the nucleus. In this cell, tracks of mRNA radiate
from the interior of the nucleus to the nuclear membrane and perhaps
into the cytoplasm (arrow). Scale bars, 1 µm.
[View Larger Version of this Image (166K GIF file)]
Labeling for poly(A) mRNA was observed in both apical and basilar
dendrites but did not extend into axons beyond the beginning initial
segment (Fig. 4C, arrow). Within apical
dendrites, labeling was heaviest in the most proximal portions and
decreased with distance from the soma (Fig. 3B). Label was
distributed in a longitudinal pattern within proximal dendrites (Fig.
4D) but in a more punctate pattern in more distal
regions. Even when sections were counterstained (e.g., Fig.
5C), it was difficult to identify the
cytoskeletal or membrane components with which the labeling might be
associated, because of both the weak fixation and tendency of DAB to
stick nonspecifically to such structures.
Fig. 5.
Ultrastructural localization of poly(A) mRNA in
isolated dendrites and processes within the neuropil. A,
Cross-section of a spiny dendrite (d) with a large spine
(s) attached. Intense labeling is present associated
with a membranous profile at the base of the spine (curved
arrows). Little labeling is present near the axonal terminal
(at) onto the dendritic shaft. B,
Cross-section of a small spiny dendrite (d) with a
labeled spine (arrow) attached. C,
Longitudinal labeled dendrite (d) with a spine
(s) attached. Concentrated labeling and a profile of
endoplasmic reticulum are present at the base of the spine
(arrow). This tissue was counterstained with uranyl
acetate and lead, which obscured the labeling to some extent.
D, Cross section of a labeled dendrite
(d) with an axon terminal (at) forming a
symmetrical synapse. The heaviest staining within the dendrite is not
associated with the synaptic site. E, Longitudinal
labeled dendrite (d) with two spines (s)
nearby but not attached. Labeling within the dendrite is associated
with slight bulges in the plasma membrane (arrowheads),
which may represent sites of attachment of dendritic spines that are
out of the plane of section. The spine to the lower
right shows labeling (arrow) in what could be a
spine neck attached to a nearby dendrite. F, Labeling of
a glial process (g) apposed to a synaptic complex in the neuropil. Scale bars, 500 nm.
[View Larger Version of this Image (153K GIF file)]
Special attention was directed toward the relationship between the
pattern of labeling and synaptic sites. The majority of dendritic
spines observed emanating from labeled regions of dendrites had
labeling associated with their base (Fig. 5A,C).
In one instance, intense labeling was associated with a profile of
endoplasmic reticulum at the base of a large dendritic spine (Fig.
5A, arrows). A smaller number of spines had
labeling extending into the spine head and shaft (Fig. 5B).
Labeling was less reliably associated with synapses onto the dendritic
shaft. In a small number of cases, concentrations of labeling were
observed near the synaptic specialization (Fig. 4D,
arrowhead). Most of the synapses onto the dendritic shaft
had only light labeling within the vicinity of the postsynaptic specialization (Fig. 5A,D), even when
followed through serial sections. No labeling was observed near a
symmetrical synapse observed onto the axon initial segment (data not
shown). Much of the subplasmalemmal labeling observed in dendrites was
not associated with either dendritic spines or synaptic sites. However, subplasmalemmal labeling was often observed where the plasma membrane bulged out slightly from the dendrite (Fig. 5E,
arrowheads). These mounds could represent sites where
denritic spines emerge out of the plane of section, although an
analysis of short series of serial sections (10-15 sections) could not
always reliably identify a dendritic spine associated with these
foci.
Within the neuropil, labeling was observed in isolated dendrites,
glial processes, and many small unidentifiable profiles, none of which
was clearly presynaptic. Labeled astrocytic processes were sometimes
observed apposed to synaptic complexes (Fig. 5F). Several examples of labeled spines attached to unlabeled dendrites were
also observed within the neuropil (data not shown). However, extensive
evaluation of the control material revealed that lightly labeled spines
attached to unlabeled dendrites were also present in all three control
tissues examined. Although not frequently encountered, at least one
labeled spine was observed in each of the control sections taken from
two different animals. This type of nonspecific labeling persisted even
when no peroxidase was applied to the tissue, suggesting that some
peroxidase-like activity may be present within spine heads.
DISCUSSION
This study provides the first ultrastructural demonstration that
mRNA is found close to the base of dendritic spines and near synaptic
specializations. These results support the hypothesis that
polyribosomes localized at these sites are engaged in protein synthesis. The significance of this arrangement will be considered below.
Electron microscopic in situ
hybridization detection
The repeated demonstration of subcellular targeting of mRNA
species has led to the need for high-resolution in situ
hybridization techniques. We and others have found that the use of
ultracryosections combined with colloidal gold detection provides a
fairly sensitive method for localizing individual messages
ultrastructurally (Pollock et al., 1990 ; Wenderoth and Eisenberg,
1991 ). This approach afforded acceptable ultrastructural preservation
of cell bodies within the rat hippocampus, but the structure of the
neuropil was severely compromised. The degree of preservation could be
improved by using thicker specimens (>1 µm), but the staining
patterns were difficult to interpret in this material because of
overlapping of structures in the neuropil. The preembedding approach
used in the present study resulted in much better preservation of the
neuropil. However, the sensitivity of this protocol is less than the
cryosection method, and we have been unable to demonstrate the
localization of individual messages. Efforts are underway to explore
additional amplification schemes that may boost the signal, along with
methods to improve the structure of ultracryosection-based methods.
Transport of mRNA within dendrites
The most striking finding with the probes to CAMKII isoforms was
the abrupt cessation of labeling along the length of the apical
dendrite. Analysis of well-preserved specimens suggests that the area
of termination of the signal corresponds to a region of significant
morphological change within the dendrite where the amount of Golgi
apparatus and rough endoplasmic reticulum (RER) precipitously decreases
(our unpublished observations). Thus, the signal for CAMKII
coincided with regions of the proximal dendrite that were more similar
in morphology to the cell soma than to more distal dendrites. This
localization is consistent with that found by Burgin and co-workers
(1990), who reported that CAMKII mRNA is restricted to cell bodies
in the rat hippocampus. The rather abrupt cessation of signal along the
apical dendrite suggests that beyond a certain point, mRNAs are either
selectively transported into or stabilized within distal dendrites.
Evidence for selective transport of mRNA into dendrites has been
provided in vitro (Davis et al., 1987 ; Kleiman et al.,
1994 ).
Labeling for poly(A) mRNA was distributed longitudinally within
proximal dendrites. Association of this label with particular subcellular structures could not be made conclusively, but the labeling
pattern was consistent with an association between mRNA and
microtubules, which also run longitudinally within dendrites (Peters et
al., 1991 ). Interactions between mRNA and microtubules have been noted
in cultured neurons (Ainger et al., 1993 ; Bassell et al., 1994 ; Litman
et al., 1994 ) and other cell systems in which the integrity of the
microtubule cytoskeleton is necessary for the correct subcellular
targeting of mRNA (Pokrywka and Stephenson, 1991 ). Messenger RNAs
destined for subcellular targeting contain specific protein binding
sites in their 3 -untranslated ends, permitting the interaction of the
mRNA with the cell's cytoskeleton (MacDonald and Struhl, 1988 ; Mowry
and Melton, 1992 ; Elisha et al., 1995 ).
The observation of intensely labeled cisterns of endoplasmic reticulum,
sometimes at the base of dendritic spines, was intriguing. No ribosomes
were identified in the present study, but Steward and Reeves (1988)
noted that almost half of the polyribosomes at the base of dendritic
spines are juxtaposed to membrane cisterns reminiscent of RER. The
possibility of RER in dendrites is interesting, because it suggests
that some post-translational modification of proteins is possible at
sites distant from the cell body. The presence of dendritic RER may
explain why the mRNA for some integral membrane proteins has been
observed within dendrites. Miyashiro et al. (1994) , using highly
sensitive amplification methods in isolated dendrites, provided
evidence that mRNAs for some glutamate receptor isoforms are found
within dendrites, although others have not been able to localize such
transcripts in synaptosomes (Chicurel et al., 1993 ). In addition,
Furuichi et al. (1993) described strong labeling for the type 1 IP3
receptor, a calcium-release channel localized to the smooth endoplasmic
reticulum, within the dendrites of Purkinje neurons. No evidence for
the presence of Golgi apparatus has yet been provided for dendrites,
although some have suggested that the spine apparatus may be involved
in post-translational modification of proteins (Spacek, 1985 ;
Gordon-Weeks, 1988 ; Steward and Reeves, 1988 ).
mRNA and synaptic sites
Previous studies on the distribution of polyribosomes within
dendrites have indicated that these organelles are selectively localized to the base of dendritic spines and beneath synaptic sites
(Steward and Levy, 1982 ; Steward and Falk, 1986 ). In the present study,
a quantitative analysis of the association of labeling with synaptic
sites was not possible because of the limited penetration of the
reagents and the small sample of dendritic spines attached to labeled
dendrites. Nevertheless, the majority of spines attached to a labeled
dendrite had labeling concentrated at their base. Labeling was also
observed consistently beneath slight bulges in the plasmalemma. Steward
and Levy (1982) estimated that ~70% of ribosomes were similarly
found beneath these "mounds" in the dentate gyrus. Their analysis
of serial sections confirmed that many of these mounds marked bases of
spines out of the plane of section. Because spine numbers can change
rapidly even in the adult animal (Woolley et al., 1990 ), some of the
labeled mounds could represent sites of developing spines.
Focal labeling was not consistently observed near postsynaptic
specializations on the dendritic shaft. This observation is consistent
with the findings of Steward and Falk, who reported that only 6% of
shaft synapses had underlying polyribosomes in 20- to 28-d-old rats. In
fact, a substantial amount of labeling was found within the interior of
the dendritic shaft or near regions of the plasma membrane not
associated with any particular specialization. Some portion of this
labeling no doubt represents mRNAs that are being transported to
various regions within the dendrite. Our results suggest, however, that
a substantial portion of mRNA may not be specifically associated with
synaptic sites.
An interesting finding was the presence of labeling for poly(A) mRNA
within the dendritic spines themselves. Labeled spines were observed
within the neuropil and also in continuity with the dendritic shaft,
although not all spines labeled at their base were labeled. The
presence of nonspecific labeling in spine heads within the control
conditions makes this result difficult to interpret. However,
considerably fewer labeled profiles were observed in the controls than
in the experimental condition, suggesting that at least some dendritic
spines have mRNA within the head and shaft. Three-dimensional analyses
of dendritic spines in various brain regions indicated that
polyribosomes are also present within a sizable portion of spines
(Spacek, 1985 ; Steward and Reeves, 1988 ; Chicurel and Harris, 1992 ;
Harris and Spacek, 1995 ). In addition, Chicurel et al. (1993) suggested
that some mRNAs may be specifically localized within spines, based on
an analysis of synaptosomal preparations.
Conclusions
The results of this study support the presence of protein
synthetic machinery near postsynaptic sites in hippocampal dendrites. Whether protein synthesis occurs within dendrites in vivo
and whether the subcellular localization of a relatively small number of mRNAs plays an important role in neuronal functioning are unknown. That dendritic mRNAs are subject to regulation by synaptic activity is
suggested by studies showing that certain stimulation conditions increased dendritic expression of CAMKII mRNA (Thomas et al., 1994 ) and
MAP2 mRNA (Johnston and Morris, 1994 ) and induced the dendritic
expression of mRNA for an immediate early gene (Link et al., 1995 ;
Lyford et al., 1995 ). The key question is whether such stimulation also
results in synthesis of functional proteins within dendrites. Indirect
evidence that it does comes from studies indicating that protein
synthesis in synaptoneurosomes is stimulated by metabotropic glutamate
agonists and calcium release from intracellular stores (Weiler and
Greenough, 1993 ). A more direct demonstration was provided by Feig and
Lipton (1993) , who found that patterned stimulation of the Schaffer
collaterals combined with carbachol application induced protein
synthesis in dendritic fields of hippocampal slices. Although not
conclusive, these early studies indicate that local protein synthesis
at the synaptic site may be an important determinant of synaptic
plasticity (Weiler et al., 1994 ). It will be interesting to determine
whether additional factors that contribute to the control of protein
synthesis, e.g., elongation factors (Ryazanov et al., 1991 ), are
present in dendrites as well. Elongation factors such as eEf-2 are
sensitive to changes in calcium and phosphorylation (Nilsson and
Nygard, 1995 ) and thus may represent one mechanism by which activity at
the synapse could regulate local protein synthesis.
FOOTNOTES
Received July 19, 1996; revised Sept. 6, 1996; accepted Sept. 9, 1996.
This study was supported by National Institutes of Health Grants
RR04050, NS14718, and NS26739 to M.H.E., and EY09093 to J.A.P. We thank
Drs. Sui Huang, Paul Kelly, and Julie Goff for providing the
oligonucleotide probes used in this study. Technical assistance was
provided by Patricia Maurides.
Correspondence should be addressed to Maryann Martone, Department of
Neurosciences, University of California San Diego, San Diego, CA
92093-0608.
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