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The Journal of Neuroscience, May 15, 1999, 19(10):3681-3690
Encephalopsin: A Novel Mammalian Extraretinal Opsin Discretely
Localized in the Brain
Seth
Blackshaw and
Solomon H.
Snyder
The Johns Hopkins University, School of Medicine, Departments of
Neuroscience, Pharmacology and Molecular Sciences, and Psychiatry,
Baltimore, Maryland 21205
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ABSTRACT |
We have identified a mammalian opsin, encephalopsin, that shows
strong and specific expression in the brain. Encephalopsin defines a
new family of opsins and shows highest homology to vertebrate retinal
and pineal opsins. Encephalopsin is highly expressed in the preoptic
area and paraventricular nucleus of the hypothalamus, both regions
implicated in encephalic photoreception in nonmammalian vertebrates. In
addition, encephalopsin shows highly patterned expression in other
regions of the brain, being enriched in selected regions of the
cerebral cortex, cerebellar Purkinje cells, a subset of striatal
neurons, selected thalamic nuclei, and a subset of interneurons in the
ventral horn of the spinal cord. Rostrocaudal gradients of
encephalopsin expression are present in the cortex, cerebellum, and
striatum. Radial stripes of encephalopsin expression are seen in the
cerebellum. In the cortex and cerebellum, encephalopsin expression is
considerably higher and more highly patterned in the adult than in the
neonate. Encephalopsin is the first putative extraocular opsin
identified in mammals and may play a role in encephalic photoreception.
Key words:
photoreceptor; circadian; photopigment; pineal; retina; in situ hybridization; Purkinje; stripes; cerebellum; hypothalamus; deep brain
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INTRODUCTION |
Vertebrate phototransduction serves
multiple purposes. Visual phototransduction has received the great bulk
of attention and has been extensively characterized at a molecular
level (Palczewski, 1994 ). The molecular mechanism of nonvisual
phototransduction, geared toward detecting changes in ambient light
intensity and entrainment of circadian and other biological rhythms,
has been generally much less well studied. Although retinal
photoreceptors mediate visual phototransduction, the identity of the
photoreceptors mediating circadian photoentrainment is unknown (Foster,
1998 ; Green, 1998 ). The photoreceptors mediating circadian
photoreception may include both the rods and cones of the retina and
other as yet unidentified sites (Provencio and Foster, 1995 ; Menaker et al., 1997 ). Cryptochromes, homologs of the blue-light receptor from
plants, have been shown recently to play a role in light entrainment of
circadian rhythms in both mammals and Drosophila (Thresher
et al., 1998 ). However, it is not yet clear whether they are actual
photoreceptors or part of the molecular machinery coupling
phototransduction to the circadian clock.
Although visual phototransduction is specifically retinal, nonvisual
phototransduction occurs in many extraretinal sites (Menaker et al.,
1997 ). These include the pineal complex, the brain, the iris,
melanocytes of the skin, and possibly other sites. Although extraretinal phototransduction has been extensively studied in nonmammalian vertebrates, adult mammals have traditionally been thought
to lack extraretinal photoreceptors (Foster, 1998 ), given the fact
that intact eyes are needed to entrain adult mammalian circadian
behavioral rhythms. Recent work, however, has raised the possibility
that mammals may indeed possess extraretinal photoreceptors. In humans
there is evidence of circadian entrainment mediated by light applied to
the backs of the knees (Campbell and Murphy, 1998 ). Moreover,
free-running circadian rhythms have been identified in a variety of
cultured mammalian cells (Balsalobre et al., 1998 ) and tissues (Zylka
et al., 1998 ), although it is not yet clear whether light can directly
entrain rhythms at these sites.
The molecular identity of the photopigments involved in nonvisual
phototransduction is not fully known. The past few years have seen the
identification of a variety of novel opsins in nonmammalian vertebrates, including the pineal complex-specific pinopsin (Okano et
al., 1994 ; Max et al., 1995 ) and parapinopsin (Blackshaw and Snyder,
1997b ), melanopsin, which is expressed in melanophores and
retinal horizontal cells (Provencio et al., 1998 ), and vertebrate ancient (VA) opsin, which is expressed in retinal horizontal and amacrine cells (Soni et al., 1998 ). The molecular characteristics of
the encephalic photoreceptor system are unknown, although in amphibians
and birds (Provencio et al., 1998 ; Wada et al., 1998 ; Yoshikawa et al.,
1998 ) expression of either rhodopsin, pinopsin, or melanopsin has been
reported in the diencephalon, depending on the species examined.
Molecular evidence of extraretinal photoreceptors in mammals has been
lacking, however, except for the expression of visual opsins in the
pineal gland (Blackshaw and Snyder, 1997a ) and cryptochromes,
which are expressed in a wide range of neuronal and peripheral tissues
(Miyamoto and Sancar, 1998 ).
We now describe the identification, cloning, and characterization of a
novel mammalian opsin, encephalopsin, which is highly concentrated in
the brain and testes and localized to discrete areas of the brain.
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MATERIALS AND METHODS |
Cloning of encephalopsin. A 180 bp fragment of a
novel opsin from Xenopus laevis covering transmembrane
domains 6 and 7 (S. Blackshaw and S. H. Snyder, unpublished
observations) was used to screen the database of expressed sequence
tags (dbESTs) using TBLASTX. A homologous clone from mouse (GenBank
accession number AA276584) was identified. This was then used as
a query to search the dbESTs, and several highly homologous human ESTs
(GenBank accession numbers T83438, AA088574, AA367654, R70620, and
R76620) were identified. After the completion of one round of 5' rapid
amplification of cDNA ends (RACE), which extended the mouse
encephalopsin cDNA to 335 bp from the start of the coding sequence,
another human EST (accession number AA297478) was identified that
extended as far as the third transmembrane domain of the
encephalopsin-coding sequence.
These sequences were used to design 5'-RACE primers for amplification
of full-length cDNAs (Frohman et al., 1988 ). Human and mouse cerebellar
and testes RNA was used as first-strand cDNA for RACE, with
GC-MELT (Clontech, Palo Alto, CA) added to the final round of
RACE to obtain the GC-rich 5' end. Human RNA was purchased from
Clontech, whereas mouse total RNA was isolated via RNeasy (Qiagen,
Hilden, Germany). Three successive rounds of 5' RACE were performed to
obtain the mouse 5' end, whereas two rounds were required to obtain the
human 5' end. DNA sequence was confirmed by sequencing multiple
independent cDNAs and via genomic sequencing, which was also used to
confirm the position of intron-exon junctions. 5'-RACE primers for
mouse encephalopsin covered residues 261-285, 471-498, and
1180-1207, as numbered from the start of the cDNA-coding sequence.
Human 5'-RACE primers covered residues 241-260 and 525-554. 3'
sequences for mouse and human encephalopsin were obtained via
sequencing multiple partial-length ESTs and, in the mouse, via genomic
DNA sequencing.
Genomic clones for mouse encephalopsin were isolated via a combination
of genomic library screening and inverse PCR. A RACE product
corresponding to residues 348-1207 of the mouse encephalopsin-coding sequence was used as a probe in genomic DNA library screening and was
used to screen 800,000 individual plaques. Two overlapping clones were
isolated that covered an interval that included the interval in the
encephalopsin-coding sequence from exon 2 to the end of the coding
sequence. Exon 1 and the flanking genomic sequence were isolated via
inverse PCR (Pang and Knecht, 1997 ). Multiple clones were
recovered by inverse PCR, and their sequences checked against the
clones obtained by 5' RACE. Full-length mouse and human encephalopsin
cDNAs were obtained by reverse transcription (RT)-PCR using
proofreading Pfu polymerase from cerebellar cDNA with primers directed
against the start and end of the coding sequences.
Phylogenetic analysis. Phylogenetic analysis was performed
with the CLUSTALW function of Macvector 6.5. Swiss-Protein
accession numbers of the sequences used to calculate the tree are as
follows: human rhodopsin, P08100; human blue cone pigment, P03999; human green cone pigment, P04001; human red cone pigment, P04000;
goldfish UV cone pigment, Q90309; chick pinopsin, P51475; salmon VA
opsin, O13018; catfish parapinopsin, O42266; mouse peropsin, O35214;
human peropsin, O14718; bovine RGR, P47803; human RGR, P47804;
squid retinochrome, P23820; squid rhodopsin, P31356; octopus rhodopsin, P09241; Drosophila Rh1 opsin, P06002; Drosophila
Rh2 opsin, P08099; and Xenopus melanopsin, AF014797.
Northern blotting. Northern blotting was performed using a
random-primed probe corresponding to residues 348-1207 of mouse encephalopsin. Twenty micrograms of total RNA were loaded per lane. RNA
was isolated via RNeasy (Qiagen) and was confirmed to be of high
quality by ethidium bromide staining of the gel before transfer. The
blot was exposed to Kodak MR film (Eastman Kodak, Rochester, NY) for 1 week. Hybridization to a -actin probe demonstrated equal loading in
each lane (data not shown).
In situ hybridization. cRNA probes corresponding to
residues 348-1207 of mouse encephalopsin were used for both
radioactive and nonradioactive in situ hybridization. Sense
control probes were tested in parallel against each time point and
tissue and at no point showed specific hybridization. Digoxygenin
in situ hybridization was performed on fresh-frozen sections
as described previously (Blackshaw and Snyder, 1997 ). Color
reactions were allowed to proceed for 5 d. C57B6 mice were used in
developmental studies. Each developmental time point was run in
parallel with multiple slides for each. For examination of pigmented
tissues, albino CD-1 mice were also used. No significant strain
differences in expression were observed. Radioactive in situ
hybridization was performed essentially as described elsewhere (Vassar
et al., 1994 ), except that 107 cpm of
33P-labeled sense and antisense probe was used per slide.
Slides were exposed to Kodak MR-2 film for 4 d.
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RESULTS |
Molecular cloning of encephalopsin
In the course of previous work, we have identified several novel
putative extraretinal opsins from cold-blooded vertebrates via PCR with
primers designed to regions of homology shared by pinopsin and
parapinopsin but not retinal opsins (Blackshaw and Snyder,
unpublished observations). We used one of these novel partial-length
cDNAs isolated from Xenopus as a query in a search for
related genes in the dbESTs. We identified novel transcripts from human
and mouse with high homology to a variety of retinal and extra retinal
opsins, although they did not prove to be true homologs of the novel
Xenopus opsin used as a query sequence.
To clone encephalopsin, we obtained full-length cDNAs by RACE from
human and mouse brain. The 3'-end sequence was obtained by sequencing
multiple independent ESTs. Full-length clones were reconstructed by
PCR. The mouse and human sequences have been deposited in GenBank under
accession numbers AF140241 and AF140242, respectively.
Analysis of the human and mouse encephalopsin sequences reveals high
homology to other members of the opsin family (Fig.
1). A number of molecular features
establish that encephalopsin fulfills the criteria expected of a
functional opsin. Such features include the following:

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Figure 1.
Primary sequence of human and mouse encephalopsin.
Sequences are aligned via CLUSTALW with members of each of the main
classes of vertebrate retinal and extraretinal opsins. Residues
conserved in the majority of sequences are in darkly shaded
boxes, whereas similar residues are in lightly shaded
boxes. The position of the lysine in the seventh transmembrane
domain that forms a Schiff base with retinal is indicated by an
asterisk, whereas the position of the counterion in the
third transmembrane domain is indicated by a diamond.
Positions of the introns present in encephalopsin and the rod, cone,
and pineal opsins are indicated with a black arrowhead.
The gray arrowhead indicates the intron that is present
in rod and cone opsins, along with pinopsin, but is absent in
encephalopsin and parapinopsin. The white arrowhead
indicates the position of the N-terminal intron found in the red- and
green-sensitive opsins.
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(1) Encephalopsin possesses a lysine at position 297 in mouse
encephalopsin (296 in bovine rhodopsin), the same as in all known
functional opsins (Schertler, 1998 ). This lysine is required to form a
Schiff base with 11-cis-retinal. This lysine occurs only in
opsins and in retinaldehyde-binding proteins such as retinochrome (Hara-Nishimura et al., 1990 ) and the RGR protein from retinal pigmented epithelium (Shen et al., 1994 ).
(2) In all functional opsins the positive charge created by the Schiff
base formed by lysine and retinal is neutralized by an amino acid in
the third transmembrane domain (Schertler, 1998 ). In all vertebrate
functional opsins this counterion is an acidic residue (Sakmar et al.,
1989 ; Nathans, 1990 ), whereas in invertebrates an aromatic amino acid,
usually tryptophan or tyrosine, is found at this site. At position 115 (corresponding to 113 in bovine rhodopsin), encephalopsin possesses an
aspartate, consistent with a functional role as an opsin. Although the
acidic counterion in retinal and pineal opsins is typically a
glutamate, aspartate can fully substitute in this role, with the only
effect being a slight red shift in maximum absorbance wavelength
(Sakmar et al., 1989 ).
(3) Vertebrate retinal and pineal opsins possess a common intron-exon
junction organization (Nathans et al., 1986 ; Max et al., 1995 ;
Yokoyama, 1996 ). Encephalopsin displays this pattern. These junctions
are at nucleotides 367, 687, and 936 of the coding sequence (Fig. 1).
These are identical to the positions of the intron-exon junctions of
parapinopsin (Blackshaw and Snyder, 1997b ). The intron typically
found at the end of the fourth transmembrane domain, conserved in the
retinal opsins and pinopsin, and the intron found in the N-terminal
domain of long-wave opsins are both absent.
(4) Many of the residues of the transmembrane domains identified as
involved in spectral tuning in vertebrate opsins are conserved in
encephalopsin. These include Gly-92, Gly-119, Ser-163, Phe-262, and
Ala-296 (Neitz et al., 1991 ; Merbs and Nathans, 1992 ; Lin et al.,
1998 ). These correspond to residues 90, 119, 164, 261, and 295, respectively, in bovine rhodopsin.
(5) Opsins typically contain high densities of serine and threonine
residues in the C-terminal region, which are substrates for
phosphorylation by various receptor kinases (Schertler, 1998 ). Encephalopsin similarly displays enrichment in serine and threonine in
the C-terminal area.
(6) Opsins usually incorporate a site for N-linked glycosylation in the
N terminal and a site for palmitoylation in the C terminal.
Encephalopsin displays both of these motifs. Although all opsins
possess these motifs, they are not diagnostic for opsins, because other
G-protein-linked receptors also possess such sites.
Comparison of the encephalopsin sequence with that of many other opsins
and related proteins indicates that encephalopsin is a member of the
vertebrate opsin family (Fig. 2).
Resemblance of encephalopsin to nonopsin G-protein-coupled receptors
and to retinochrome is substantially less than is resemblance to both vertebrate and invertebrate opsins. A unique two amino acid gap corresponding to residues 200 and 201 in bovine rhodopsin that occurs
only in extraretinal vertebrate opsins (Okano et al., 1994 ; Max et al.,
1995 ; Blackshaw and Snyder, 1997b ; Soni and Foster, 1997 ; Sun et
al., 1997 ; Provencio et al., 1998 ) and in invertebrate opsins is
present in encephalopsin. Mouse and human encephalopsins are highly
homologous to one another, showing 85.5% amino acid identity and 92%
amino acid similarity over the full-length of the protein.

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Figure 2.
A, P value distribution of matches
to mouse encephalopsin matches determined by a BLASTP search using
BLAST 2.0 against the December 1998 GenBank release. Redundant
sequences were not eliminated for this analysis. Other GPCRs represent
nonopsin G-protein-coupled receptors. B, Dendrogram of
encephalopsin phylogeny. Dendrograms are determined by CLUSTALW
analysis. The gap penalty is set at 2, and the gap extension penalty is
set at 0.01. Encephalopsin groups with vertebrate retinal and pineal
opsins.
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Analysis by a dendrogram distinguishes two large families, vertebrate
and invertebrate opsins (Fig. 2B). Mouse and human
encephalopsins clearly belong to the vertebrate family.
Attempts to reconstitute biochemically (Merbs and Nathans, 1992 )
encephalopsin in transfected 293 cells and efforts to demonstrate light-activated calcium influx in mammalian cells cotransfected with
G 16 (Offermanns and Simon, 1995 ; Krautwurst et al., 1998 ) and
encephalopsin have not resulted in reproducible evidence of light
absorption (data not shown).
Encephalopsin is enriched in brain and testes and expressed in
putative light-sensitive areas of the diencephalon
Northern blot analysis reveals expression of encephalopsin only in
cortex, cerebellum, and testes (Fig. 3).
With longer exposures, we observe expression in whole brain, along with
some faint expression in heart, liver, and kidney (data not shown).
Even with very prolonged exposure, we observe no expression of
encephalopsin in the retina, pineal gland, or skin. RT-PCR analysis
also fails to reveal any encephalopsin in these three areas (data not
shown).

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Figure 3.
Northern blot analysis of mouse encephalopsin
expression. A single band of 1.9 kb is detected.
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In situ hybridization shows a striking selectivity of
encephalopsin expression in the adult mouse brain (Fig.
4). Very high densities are evident in
lateral regions of the thalamus, the cerebellum, and portions of the
frontal cortex (Fig. 4A). Within the cerebral cortex,
expression is predominant in frontal, perirhinal, cingulate, and
insular cortex (Fig. 4B). Only negligible expression is
evident in the parietal, temporal, and occipital cortices. Within the
thalamus, encephalopsin expression is highest in the VPL, the posterior
thalamus, the dorsomedial thalamus, and the lateral and medial
geniculate nuclei, with much lower expression in mediodorsal and other
more medially located nuclei of the thalamus. Within the cerebellum,
expression is exclusively localized to Purkinje cells. Very high
expression is also evident in the anteromedial preoptic area and
subfornical organ.

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Figure 4.
A, Expression of encephalopsin in a
horizontal section of adult mouse brain. Radioactive in
situ hybridization is used. B, Expression
of encephalopsin in a rostrocaudal series of coronal sections of adult
mouse brain. Radioactive in situ hybridization is used.
Cb, Cerebellum; Cg ctx, cingulate cortex;
FrCtx, frontal cortex; InsCtx, insular
cortex; MPA, medial preoptic area; Occ
ctx, occipital cortex; PC, Purkinje cell of
cerebellum; PRh, perirhinal cortex; Sfo,
subfornical organ; Str, striatum; Thal,
thalamus; VDB, ventral diagonal band.
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The most extensive evidence of light detection in the brain has been
reported in selected nuclei in the diencephalon, specifically the
paraventricular nuclei and the anterior medial preoptic area (Foster et
al., 1994 ; Vigh and Vigh-Teichmann, 1998 ). Within the diencephalon, it
is notable that the paraventricular nuclei and the anterior medial
preoptic areas selectively express high levels of encephalopsin (Fig.
5).

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Figure 5.
Digoxygenin in situ hybridization
of encephalopsin expression in diencephalic structures.
Top, The preoptic nucleus is taken at 50×.
Bottom, The paraventricular nucleus is at 200×.
Arrows indicate selected encephalopsin-positive cells in
the paraventricular nucleus of the hypothalamus. AC,
Anterior commissure; MPOA, medial preoptic area;
OC, optic chiasm; 3v, third
ventricle.
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Encephalopsin displays rostrocaudal gradients of expression
In several areas of the brain we observe striking rostrocaudal
gradients of encephalopsin expression (Fig.
6A). Within the cer- ebellum, the more anteriorly located lobes, such as 4, 5, and 6, are more enriched in encephalopsin than are the posteriorly located lobes, such as 8-10. Both the numbers of
encephalopsin-positive cells and the intensity with which they express
encephalopsin vary along the rostrocaudal axis (Fig. 6B). In
cerebral cortex, encephalopsin expression is most prominent in
layer 4, with somewhat less expression in 5 and very little
expression in 6 (Fig. 7A). This lower expression is greatest in the frontal, cingulate, and insular cortices and much less in the periglomerular cortex. Expression is greater in rostral than caudal areas of these portions of the cortex. In the corpus striatum, encephalopsin is expressed in the
population of small neurons whose density is greater in rostral than
caudal zones (Fig. 7B).

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Figure 6.
A, Encephalopsin shows a
rostrocaudal gradient of expression in the cerebellum. Digoxygenin
in situ hybridization is used. Numbers
indicate the lobe of the vermis and are numbered in rostrocaudal order.
Pictures are taken at 50×. B, Both the number of
encephalopsin-expressing cells and the intensity of encephalopsin
expression show a rostrocaudal gradient in the cerebellum. Pictures are
taken at 400×. Gr, Granule cell layer;
Mol, molecular layer; PC, Purkinje
cell layer.
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Figure 7.
A, Encephalopsin expression shows a
rostrocaudal gradient within the cerebral cortex. Cortical layers are
indicated by numbers. Digoxygenin in situ
hybridization is used. All pictures are taken at 50×.
B, Encephalopsin expression shows a rostrocaudal
expression gradient in the striatum. Arrows indicate
selected encephalopsin-positive cells. Pictures are taken at 50×.
Str, Striatum.
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Cerebellar encephalopsin displays a striped pattern
of expression
At low magnification in the cerebellum, encephalopsin
expression occurs in interrupted lines in both a horizontal and
vertical dimension and in both the vermis and hemisphere (Fig.
8A). Expression is
evident only in Purkinje cells. Analysis at higher power reveals that
this expression involves radially oriented stripes that are evident in
both vertical and horizontal dimensions (Fig.
8B,C). Examination of consecutive
sections, focusing on a single point indicated by an
arrow (Fig. 8B-D), reveals the
appear- ance and disappearance of negative and positive stripes.
In the hemispheres the stripes are wider than in the vermis (Fig.
8D).

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Figure 8.
A, Encephalopsin is expressed in a
striped pattern in the cerebellum. Radioactive in situ
hybridization is used on coronal sections. The vermis and hemispheres
are indicated. White arrows indicate two consecutive
stripes. B, Horizontal stripes of encephalopsin
expression in the vermis are shown. Digoxygenin in situ
hybridization is used here. Consecutive sections are shown and numbered
accordingly. All pictures are taken at 50×. C, Vertical
stripes of encephalopsin expression are seen in the vermis. The
pictures shown are from the same adjacent sections used in
B. All pictures are taken at 50×. D,
Stripes of encephalopsin expression in the cerebellar hemispheres are
shown. Pictures are taken from the same series of consecutive sections
used in B and C. All pictures are taken
at 50×.
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Encephalopsin expression is developmentally regulated
We fail to see any expression of encephalopsin in the embryonic
cerebellum and cerebral cortex, and levels in the adult cerebellum and
cortex are substantially higher than are those in the early postnatal
period. Additionally, the rostrocaudal gradients and the cerebellar
stripes are not clearly evident until 3 weeks of age (Fig.
9A). At embryonic day 18.5 (E18.5), no encephalopsin expression is detected in the cerebellum
despite substantial levels of encephalopsin in the adjacent dorsal
pons. At postnatal day 4 (P4), Purkinje cells express encephalopsin,
but no stripes or gradients are clearly evident. At P20, stripes can be
seen, but these are substantially more notable in the adult cerebellum. This developmental pattern is particularly striking in light of a very
different developmental pattern for most other forms of cerebellar
stripes. Of the proteins expressed in a striped pattern in the
cerebellum, most are prominent in embryonic and early postnatal life,
and many are thought to play a role in the development of the
cerebellum (Herrup and Kuemerle, 1997 ; Lin and Cepko, 1998 ; Oberdick et
al., 1998 ). Encephalopsin is unusual in its exclusive expression as
stripes in the adult but not in earlier stages.

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Figure 9.
A, Developmental expression of
encephalopsin in the cerebellum is shown. The adult pattern of
encephalopsin expression is not seen until several weeks after birth.
Sagittal sections are shown. E18.5 is taken at 100×, P4 is taken at
50×, and P21 and adult are taken at 25×. B,
Developmental expression of encephalopsin expression in the cerebral
cortex is shown. Encephalopsin expression is absent prenatally,
relatively evenly distributed throughout the cortex in the early
postnatal mouse, and showing rostrocaudal gradients and regional
organization by P20. Digoxy genin in situ hybridization is shown for
E18.5, P2, P4, and P20, whereas radioactive in situ
hybridization (bottom) is shown for P2 and P20.
Digoxygenin in situ hybridization pictures are taken at
50× for E18.5, 25× for P2 and P4, and 12.5× for P20.
C, Encephalopsin expression is prominent in developing
spinal cord. Sagittal sections of embryonic time points are taken of
the cervical cord at 100× for E15.5 and 50× for E17 and E18.5. The
coronal section at P2 is taken of cervical spinal cord at 50×.
Arrows indicate selected encephalopsin-positive
interneurons of the ventral horn. The color reaction in the P2 section
is allowed to proceed twice as long as that in the embryonic time
points, so the observed abundance levels of encephalopsin are not
directly comparable. Cb, Cerebellum;
FrCtx, frontal cortex; OcCtx, occipital
cortex.
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In the cerebral cortex, the rostrocaudal gradient is absent at E18.5,
P2, and P4 but becomes evident at P20 and is most prominent in the
adult (Fig. 9B).
In contrast to the negligible expression of encephalopsin in embryonic
life in most parts of the nervous system, the spinal cord displays
substantial encephalopsin at early stages (Fig. 9C). The
highest levels of encephalopsin occur in a subset of interneurons in
the ventral cord of the spinal cord at E15.5. Expression decreases at
E17 and E18. The spinal cord reaches functional maturity at birth. At
P2, encephalopsin expression is clearly restricted to the area of
interneurons in the ventral horn.
Encephalopsin is localized to pachytene spermatids in
the testes
In situ hybridization reveals developmental changes in
encephalopsin expression in the testes (Fig.
10). No expression is evident at 2 weeks of age, whereas substantial expression occurs at 12 weeks when
mature sperm are forming. Only a subset of seminiferous tubules
expresses encephalopsin. At high power, encephalopsin expression is
restricted to pachytene spermatids with negligible levels in basal
cells or in the mature round spermatids. Pachytene spermatids are
undergoing meiosis. During meiosis, marked upregulation takes place for
many genes unrelated to the meiotic process, and many of these
transcripts are not translated into protein (Eddy and O'Brien, 1998 ).
Thus, it is unclear whether encephalopsin in these spermatids plays a
functional role. The specificity of the in situ
hybridization process is indicated by the absence of staining with
sense control probes.

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Figure 10.
Strong encephalopsin expression is observed in
meiotic spermatids. Encephalopsin expression is seen in a subset of
seminiferous tubules of the 12-week-old (12w) but not
the 2 week-old (2w) mouse, indicating expression in
sperm. High-power pictures indicate that encephalopsin expression is
restricted to pachytene spermatids. All pictures are at 100×, except
for the high-power shot that is at 400×. BC, Basal
cells; PS, pachytene spermatids; RS,
round spermatids.
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DISCUSSION |
The major finding of our study is the identification and
characterization of what appears to be the first opsin expressed specifically in the mammalian brain. Until now mammalian opsins have
been described as specifically expressed only in the retina and the
pineal. In a few instances, expression of certain retinal and pineal
opsins has been detected in selected regions of lower vertebrate brains.
Because the major function of opsins involves light detection, we must
consider the possibility that encephalopsin participates in such a
process. There is a substantial literature establishing the presence of
photoreceptors in the diencephalon of several lower vertebrates
(Menaker et al., 1970 ; Hartwig and Oksche, 1982 ). Although light
entrainment of circadian rhythms in adult mammals requires the presence
of intact eyes (Menaker et al., 1997 ; Roenneberg and Foster, 1997 ),
this does not rule out the presence of extraocular photoreceptors that
may play a modulatory role in circadian entrainment (Foster, 1998 ).
Abundant evidence establishes that light can penetrate through the
skull into deep layers of the mammalian brain including the
diencephalon (van Brundt et al., 1964 ; Wurtman, 1975 ; Hartwig and van
Veen, 1979 ). These studies have used both rodents (Viggiani et al.,
1970 ) and humans (Muller and Wilson, 1986 ). Interestingly, direct
effects of light on functions of the cerebral cortex have been reported
(Wade et al., 1988 ), with light application to cerebral cortical slices
regulating neurotransmitter release.
How do the properties of encephalopsin fit with a potential role in
light perception? The molecular architecture of encephalopsin indicates
that it possesses all the appropriate residues for phototransduction, most notably the lysine at position 297 and the counterion at residue
115. In preliminary experiments, we attempted to reconstitute encephalopsin biochemically and to monitor light absorption. However, we have so far been unable to obtain reproducible evidence of light
absorption. Similar attempts to reconstitute recombinant extraretinal opsins or novel opsins expressed in the mammalian retinal
pigmented epithelium have typically been unsuccessful, except for only
pinopsin (Okano et al., 1994 ) and VA opsin (Soni et al., 1998 ), both of
which are considerably more homologous to retinal opsins than is encephalopsin.
Some of the localizations of encephalopsin in the brain fit with the
literature on brain phototransduction. Thus, within the diencephalon,
encephalopsin is enriched in the paraventricular nucleus and the medial
preoptic nucleus, both of which are thought to play a role in
encephalic photoreception (Vigh et al., 1983 ; Foster et al., 1994 ; Vigh
and Vigh-Teichmann, 1998 ). Other localizations, such as the Purkinje
cells of the cerebellum and various neurons in the cerebral cortex and
elsewhere, have no known relationship to circadian photoreception.
Interestingly, the cerebellum and cerebral cortex are substantially
more superficial structures than is the diencephalon and hence would
have greater access to light. Finally, even in the absence of light
activation, extraretinal opsins may form some essential component of
the circadian clock, as has been suggested by the discovery of
functional opsins in eyeless cave-dwelling fish (Tabata, 1982 ) and
crustaceans (Crandall and Hillis, 1997 ).
Conceivably, encephalopsin is a G-protein-coupled retinoid receptor.
The known retinoid receptors do not resemble opsin in structure and are
instead all transcription factors of the nuclear hormone receptor
superfamily. They are notably involved in processes related to
development, such as early patterning and cell fate (Durston et al.,
1998 ; Maden, 1998 ). Rostrocaudal variations in protein expression and
stripes in the cerebellum are often associated with these types of
developmental events. However, in most cases the proteins displaying
these properties are highly expressed early in development (Herrup and
Kuemerle, 1997 ; Oberdick et al., 1998 ). By contrast, encephalopsin
expression is much higher and more elaborately patterned in the adult.
Accordingly, it would seem more likely that the rostrocaudal gradients
and cerebellar stripes participate in some coding mechanism. In the
mammalian retina, gradients of rhodopsin and cone protein expression
are seen and are thought to play a role in visual processing (Wang et
al., 1992 ; Cepko, 1996 ). Similar gradients of opsin expression also
occur in photosensitive pineal organs (Blackshaw and Snyder, 1997b ).
Gradients of encephalopsin in the mammalian brain could be serving an
analogous function.
 |
FOOTNOTES |
Received Jan. 12, 1999; accepted March 2, 1999.
This work was supported by United States Public Health Service Grant
DA-00268 and Research Scientist Award DA-00074 to S.H.S. We thank H. Sun and D. Krautwurst for assistance with the biochemical reconstitution of encephalopsin, J. Nathans and K.-W. Yau for comments
on this manuscript, and J. Pevsner, D. Linden, and C. Riley for helpful discussions.
Correspondence should be addressed to Dr. Solomon H. Snyder, The Johns
Hopkins University, School of Medicine, Department of Neuroscience, 725 North Wolfe Street, Baltimore, MD 21205.
Dr. Blackshaw's present address: Department of Genetics, Harvard
Medical School, 200 Longwood Avenue, Boston, MA 02115.
 |
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