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The Journal of Neuroscience, August 15, 2001, 21(16):6170-6180
Spatial Shaping of Cochlear Innervation by Temporally Regulated
Neurotrophin Expression
Isabel
Fariñas1, 2,
Kevin R.
Jones3,
Lino
Tessarollo5,
Allison J.
Vigers3,
Eric
Huang1,
Martina
Kirstein2,
Dominique C.
de
Caprona4,
Vincenzo
Coppola5,
Carey
Backus1,
Louis F.
Reichardt1, and
Bernd
Fritzsch4
1 Program in Neuroscience, Department of Physiology and
Howard Hughes Medical Institute, University of California, San
Francisco, California 94143-0724, 2 Departamento de
Biología Celular, Universidad de Valencia, 46100 Burjassot,
Spain, 3 Department of Biology, University of Colorado,
Boulder, Colorado 80309, 4 Department of Biomedical
Sciences, Creighton University, Omaha, Nebraska 68178, and
5 Neural Development Group, Mouse Cancer Genetics Program,
National Cancer Institute, Frederick, Maryland 21701
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ABSTRACT |
Previous work suggested qualitatively different effects of
neurotrophin 3 (NT-3) in cochlear
innervation patterning in different null mutants. We now show that all
NT-3 null mutants have a similar phenotype and lose all
neurons in the basal turn of the cochlea. To understand these
longitudinal deficits in neurotrophin mutants, we have compared the
development of the deficit in the NT-3 mutant to the
spatial-temporal expression patterns of brain-derived neurotrophic factor (BDNF) and NT-3, using
lacZ reporters in each gene and with expression of the
specific neurotrophin receptors, trkB and trkC. In the
NT-3 mutant, almost normal numbers of spiral ganglion neurons form, but fiber outgrowth to the basal turn is eliminated by
embryonic day (E) 13.5. Most neurons are lost between E13.5 and E15.5.
During the period preceding apoptosis, NT-3 is expressed in supporting cells, whereas BDNF is expressed mainly in
hair cells, which become postmitotic in an apical to basal temporal gradient. During the period of neuronal loss, BDNF is absent from the
basal cochlea, accounting for the complete loss of basal turn neurons
in the NT-3 mutant. The spatial gradients of neuronal loss in these two mutants appear attributable to spatial-temporal gradients of neurotrophin expression. Our immunocytochemical data show
equal expression of their receptors, TrkB and
TrkC, in spiral sensory neurons and thus do not relate
to the basal turn loss. Mice in which NT-3 was replaced
by BDNF show a qualitative normal pattern of innervation
at E13.5. This suggests that the pattern of expression of neurotrophins
rather than their receptors is essential for the spatial loss of spiral
sensory neurons in NT-3 null mutants.
Key words:
neurotrophins; ear innervation; development of ear
innervation; ear and neurotrophin expression; NT-3; sensory
neuron survival
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INTRODUCTION |
The inner ear develops from the otic
placode that invaginates to form the otocyst by embryonic day (E) 9.5 (Fritzsch et al., 1998a ). Between E9.5 and E15.5, the otocyst produces
the cochlear (spiral) and vestibular sensory neurons (Ruben, 1967 ) that
will innervate the future cochlea, saccule, utricle, and semicircular canals (Sobkowicz, 1992 ; Fritzsch and Nichols, 1993 ; Karis et al.
2001 ).
These otic (cochleo-vestibular) sensory neurons require brain-derived
neurotrophic factor (BDNF) and neurotrophin 3 (NT-3) for their survival (for review, see Fritzsch et al.,
1999 ). In situ studies have shown that inner ear sensory
epithelia express both neurotrophins, whereas otic sensory neurons
express their receptors, trkB and trkC
(Pirvola et al., 1992 , 1994 ; Schecterson and Bothwell, 1994 ; Wheeler et
al., 1994 ). NT-3 null mutants lose ~84% of all cochlear
neurons at birth (Fariñas et al., 1994 ; Ernfors et al., 1995 ;
Tessarollo et al., 1997 ). In contrast, BDNF and
trkB mutant mice lose mainly vestibular neurons (Fritzsch et
al., 1995 ; Bianchi et al., 1996 ). BDNF/NT-3 or
trkB/trkC double homozygous mutants lose all cochlear and
vestibular neurons around birth (Ernfors et al., 1995 ; Minichiello et
al., 1995 ; Schimmang et al., 1997 ; Silos-Santiago et al., 1997 ).
Initial analyses of the cochlea reported that the phenotypes of
BDNF and trkB mutants are restricted to type II
spiral neurons that innervate outer hair cells (OHC), suggesting an
effect in the radial direction (Ernfors et al., 1995 ; Schimmang et al., 1995 ). Other examination of BDNF and trkB
homozygous mutants revealed the presence of OHC afferents to the basal
turn of the cochlea, suggestive of a longitudinal effect (Bianchi et
al., 1996 ; Fritzsch et al., 1997a ). Initial observations of
NT-3 and trkC mutants reported a complete loss of
type I spiral sensory neuron innervation of inner hair cell (IHC)
(Ernfors et al., 1995 ; Schimmang et al., 1995 ). Again, others suggested
that NT-3 and trkC mutants lose spiral neurons
predominantly in the basal turn (Fritzsch et al., 1997a ,b , 1998b ).
Longitudinal differences in innervation density are known in adult
mammals (Ryugo, 1992 ), and the neurotrophins could provide the
molecular basis for these differences.
Unfortunately, available in situ data on neurotrophins and
their receptors cannot explain the selective dependency of, for example, basal turn spiral neurons on NT-3 or
trkC (Pirvola et al., 1994 ; Schecterson and Bothwell, 1994 ).
At birth a longitudinal gradient of NT-3 (Pirvola et al.,
1992 ) or of both BDNF and NT-3 (Wheeler et al.,
1994 ) was reported, with the highest expression in the apex. This
expression pattern does not correlate with the basal turn loss of
sensory neurons in NT-3 mutants.
Now, we characterize the embryonic deficits in cochlear neurons and
their projections using two independently generated NT-3 null mutants. We also present the developmental expression patterns of
NT-3 and BDNF using lacZ inserted into
the NT-3 and BDNF loci as reporters. These
results indicate that a temporal developmental gradient of
BDNF expression results in a spatial gradient of sensory neuron loss in mice lacking NT-3.
Parts of this paper have been published previously (Fritzsch et al.,
1997d , 2000 ).
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MATERIALS AND METHODS |
Animal breeding and genotyping.
NT-3lacZneo and
BDNFlacZneo mice were generated and bred
as previously described (Fariñas et al., 1994 ; Bennett et al.,
1999 ). NT-3lacZneo mice were genotyped as
previously described (Fariñas et al., 1994 ). For
BDNFlacZneo mice, tail biopsies were
genotyped by PCR analysis. One PCR primer (MBDSA10,
GTGGAGTTCTGCTAATGAGA) was located upstream of the BDNF coding exon, and the other primer (lacZN5, GTGCTGCAAGGCGATTAAGT) was located in the lacZ gene. PCR was performed in 10 mM Tris-HCl, pH 9.0 at 25°C, 50 mM KCl, 1.5 mM
MgCl2, 0.1% Triton X-100 with 50 µM dNTPs and 0.3 µM primers. PCR conditions were: 3 min at 94°C, then 35 cycles with 30 sec denaturation at 94°C, 30 sec annealing at 58°C, and 1.5 min elongation at 72°C.
We also replaced the mouse NT-3 (also known as Ntf3) coding
sequence with BDNF (Coppola et al., 2001 ). We
analyzed the pattern of innervation of mice of one litter of these
transgenic mice at E13.5 (two NT-3tgBDNF
homozygotics, two NT-3tgBDNF
heterozygotes, and one wild type) (see Fig. 2D). A
more detailed account of the effect of
NT-3tgBDNF on the pattern of innervation
of the cochlea in newborn mice is provided by Coppola, et al. (2001) .
-galactosidase histochemical staining. For the expression
analysis, we used two to five heterozygous
NT-3lacZneo and
BDNFlacZneo animals per developmental
stage from E9.5 to birth and two adult NT-3lacZneo heterozygous mice. In
parallel, we examined one or two mutants per stage, and none of them
showed any differences in -galactosidase activity and distribution
when compared with heterozygous littermates (data not shown). Pregnant
mice were killed by cervical dislocation, and the embryos were removed
rapidly and placed in ice-cold PBS. Embryos were fixed with 4%
paraformaldehyde (PFA) in 0.1 M phosphate buffer, pH 7.4, for 2 hr. Whole embryos (E9.5-E12.5) or hemisected heads, with the brain removed to expose the ear (E13.5 to adult), were
reacted as previously described (Fritzsch et al., 1997c ) either at
36°C for 2-4 hr or at room temperature overnight. Reacted ears were
stored in 4% PFA until dissection. After dissection, the ears were
whole-mounted using appropriately sized spacers to avoid distortion by
the coverslip. Two ears per stage were viewed in a compound Olympus
microscope using a red filter to enhance the blue reaction product.
Images were captured with a Dage CCD camera (640 × 480 pixels
resolution) and processed using ImagePro software (Media Cybernetics,
Silver Spring, MD). At least two ears per stage were embedded in
epoxy resin, sectioned at 1-2 µm thickness, and viewed with
differential interference contrast and a red filter to enhance the blue
reaction product. For the sake of simplicity, sites of accumulation of
the blue reaction product resulting from the action of
-galactosidase on X-gal will be referred to here as sites of
BDNF or NT-3 expression.
Cell counts. Embryos at different stages were fixed in
Carnoy's solution, embedded in paraffin, serially sectioned at 7 µm in the sagittal plane, and Nissl-stained using cresyl violet as described elsewhere (Fariñas et al., 1996 ). Ganglion cells
and numbers of pyknotic profiles were counted every fourth
section in wild-type embryos and mutant littermates. Total numbers were compared using a one-tailed Student's t test for
statistical significance. Apoptotic profiles in the developing
vestibular and cochlear ganglia were also studied in thick resin
sections through ears of control and mutant littermates.
DiI tracing and whole-mount immunocytochemistry. We studied
at least three ears per stage [E12.5, E13.5, E14.5, E15.5, E18.5, and
postnatal day (P) 0] using DiI diffusion in perfusion fixed animals.
Briefly, embryos were cold anesthetized and perfused through the heart
with 4% paraformaldehyde in 0.1 M phosphate buffer, pH 7.4. Filter strips soaked with the lipophylic tracer DiI
(Molecular Probes, Eugene, OR) were inserted into the brainstem to
selectively label the afferents to the ear (Fritzsch and Nichols, 1993 ). After an appropriate diffusion time (2-4 d at 36°C), the ears
were dissected, whole-mounted, and viewed in a compound microscope using epifluorescence illumination and a Texas Red filter set. Subsequently, the ears were defatted, incubated with an antibody against acetylated tubulin (Sigma, St. Louis, MO) for 3 d,
followed by a secondary antibody tagged with peroxidase, and reacted
with diaminobenzidine. To compare the distribution of fibers to that of
cells expressing NT-3, some ears that had been previously
reacted to detect -galactosidase were also immunostained with
acetylated tubulin as described (Fritzsch et al., 1997c ).
Immunocytochemistry. Antibodies to acetylated tubulin (see
above) and antibodies to TrkB (also known as Ntrk2) and
TrkC (also known as Ntrk3) were used in whole mounts and
paraffin sections of Carnoy-fixed material as previously described
(Fritzsch et al., 1997c ; Fariñas et al., 1998 ). The specificity
of each Trk antibody has been determined using Western blot
analysis and correlation of immunohistochemistry with in
situ hybridization (Huang et al., 1999 ).
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RESULTS |
Expression of NT-3 and BDNF in newborn mice does not correlate with
the pattern of fiber loss seen in the cochlea of the corresponding
mutants
We have taken advantage of the insertion of a lacZ reporter gene
into the BDNF and NT-3 loci to monitor the
endogenous expression of these neurotrophins by assessing the
-galactosidase staining pattern. In newborn mice heterozygous and
homozygous for the NT-3lacZ or
BDNFlacZ alleles, we used a combination of
-galactosidase staining and acetylated tubulin whole-mount
immunocytochemistry to examine simultaneously the NT-3 and
BDNF expression domains and the pattern of sensory neuron
fiber distribution. Notable innervation differences, but identical
patterns of neurotrophin expression, between heterozygous and
homozygous mutant littermates could be observed in neonates (Fig.
1).

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Figure 1.
Distributions of nerve fibers in the cochlea of
NT-3 and BDNF heterozygous and homozygous
mutant mice at birth. Whole-mounted cochleas from a newborn
NT-3 homozygous mutant (A, C) and an
NT-3 heterozygous littermate (B),
a BDNF heterozygous mutant (D),
and a BDNF homozygous mutant (E)
showing the distribution of NT-3
(A-C) and of BDNF (D,
E) as revealed by -galactosidase histochemistry and the
distribution of nerve fibers as revealed by acetylated tubulin
immunocytochemistry. Notice that the cochlea is labeled uniformly
throughout its extent by the blue histochemical product. In
NT-3 null mice, no radial fibers are present in the
basal turn (A, C). The only innervation present in this
turn is supplied by the few fibers diverted from the middle turn that
extend along the longitudinal axis of the cochlea next to inner hair
cells (C, crossed arrows). The only outer
hair cells in the basal turn approached by afferent fibers were those
adjacent to the middle turn (arrow). This contrasts with
the presence of numerous radial fibers innervating inner and outer hair
cells in the basal turn of an NT-3 heterozygous
littermate (B, arrows). The density of
radial fiber, as revealed by an increase in the spacing between radial
fiber bundles, is reduced in the absence of BDNF
(E) when compared with the heterozygous condition
(D). This reduction in fiber density is stronger
in the apex of BDNF null mutants. Thus, the homogeneous
distribution of NT-3 and BDNF
at birth does not explain the selective loss of basal turn spiral
neurons in NT-3 null mutants or the reduced density of
radial fibers in the apex of BDNF null mutants.
ggl, Ganglion; RF, radial fiber bundles.
Scale bars, 0.1 mm.
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Similar expression pattern of the lacZ gene in the cochlea
was observed in heterozygous and homozygous NT-3 mutants at
birth (Fig. 1A-C). However, although
cochleas from NT-3 heterozygous mice were heavily
innervated by radial cochlear fibers (Fig. 1B), there
was a conspicuous absence of radial fibers to the base of the cochlea
in the NT-3 mutants (Fig.
1A,C). The few fibers that were
seen spiraling next to IHC toward the tip of the basal turn in
NT-3 deficient cochleas were basal extensions of the
remaining middle turn fibers (Fig. 1C). OHC in the
basal turn of the mutants were not approached by any fibers except for
the few OHCs immediately adjacent to the middle turn region (Fig.
1C). Despite the regional fiber loss observed at birth in
the absence of NT-3, the intensity and distribution of the
blue precipitate appeared uniform throughout the extent of the cochlear
sensory epithelium.
In the absence of BDNF, the cochlea showed more subtle
differences in the degree of innervation between heterozygotes and homozygotes (Fig. 1D,E). Comparison
between littermates with one or two mutant BDNF alleles
showed a reduction in the density of radial fibers throughout the
cochlea in the homozygous condition with the least pronounced
difference in the base and the most obvious in the apex. In fact,
portions of the apex were almost devoid of radial fibers (Fig.
1E) (Bianchi et al., 1996 ). The expression of
endogenous BDNF, as revealed by the reporter gene, showed no
apparent regional differences throughout the cochlea that could readily
explain the spatial effect of the spatially restricted fiber
loss in the BDNF-deficient animals.
Other NT-3 null mutants have a similar phenotype
Reports describing different phenotypes in the cochlea of
NT-3-deficient animals have used mouse strains carrying
mutations independently generated in different genetic backgrounds
[compare Ernfors et al. (1995) , Fritzsch et al. (1997c) ]. To
determine whether genetic background is responsible for the different
findings, we examined the cochleas of an independently generated
NT-3 mutant (Ernfors et al., 1995 ). As illustrated in Figure
2E,F,
the phenotypes, as shown by DiI tracing, were essentially the same in
both mutant strains at birth. Similar to our previous data (Fritzsch et
al., 1997c ) (Fig. 1), we observed a complete loss of neurons in the basal turn, a complete absence of radial fibers to the sensory epithelium in this turn, and tangential extension of fibers from the
middle turn along the basal turn IHC. The third available NT-3 null
mutation (Liebl et al., 1997 ; Tessarollo et al., 1997 ) shows a similar
loss of basal turn sensory neurons (Coppola et al., 2001 ). Thus, all
three NT-3 null mutants have a uniform phenotype.

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Figure 2.
Development of cochlear afferent innervation at
E12.5 (A, B), E13.5 (C, D,
inset), and P0 (E, F), and of
central projections at P0 (G, H).
Arrows in A show orientation for
A-F; arrows in
H show orientation for the coronal sections of
G and H. Outgrowth of afferents
(A, B) is labeled with DiI in E12.5 wild-type
(A) and NT-3 mutant
(B) littermates. Note projection to the basal
turn in both cases. At E13.5, the NT-3 mutant
(C) lacks radial afferents in the base of the
cochlea. In contrast, NT-3tgBDNF
mutants show a pattern of innervation reminiscent of same age wild-type
animals (inset) with an overall reduced density of
innervation but a clear innervation of the basal turn
(D). Newborn NT-3 mutant mice from
a different genetic strain (Ernfors et al., l994) show comparable
patterns of innervation (E-F). Compared with the
dense radial afferent bundles in the wild types
(E), notice the complete absence of radial
afferents in the basal turn of mutants (F) and
exclusive innervation of inner hair cells. Cochlear afferents to the
brainstem in control (G) and in
NT-3 mutant (H) littermates
show a topologically restricted projection from the base and the middle
turn to the more dorsal and ventral aspects of the ventral cochlear
nucleus, respectively. The distinction between the two areas of
projection is less pronounced in NT-3 mutants,
presumably because the remaining sensory fibers occupy the areas
normally innervated by the lost afferents. Comparable coronal section
planes are indicated by the presence of olivocochlear efferent fibers
(G, H). BT, Basal turn;
MT, middle turn; OCB, olivo-cochlear
bundle; PC, fibers to the posterior crista;
WT, wild type. Scale bars, 100 µm.
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The topology of the projection from the cochlea to the brainstem was
also analyzed by applying DiI to both the apical and basal turns. After
diffusion of the dye, the implantation sites were verified in
whole-mounted cochlea. Brains of animals with comparable injection
sites and comparable spread of DiI along the cochlea were chosen for
analysis. We assume that these animals had both topologically and
quantitatively comparable injections. In coronal sections of wild-type
animals, two distinct bands of projection fibers ended in the ventral
cochlear nucleus (Fig. 2G). The more
ventrolateral projection is from the middle turn, the more dorsomedial
projection comes from the basal turn. In the NT-3 mutants,
there were also two visible bundles from the middle and basal turn of
the cochlea, respectively, but the segregation was less distinct (Fig.
2H). Both the wild-type and the NT-3
mutant show efferent fiber bundles, suggesting that sections were taken at comparable levels (Fig. 2G,H).
Cochlear afferent fibers to the basal turn are lost at E13.5 in
NT-3 mutants
In control animals, it is first possible to visualize cochlear
neurons and their projections to the developing cochlear duct by DiI
labeling at E12.5 (Fig. 2A). In both control (Fig.
2A) and NT-3 mutant embryos (Fig.
2B), fibers extend from the sensory neurons to the
developing cochlea at this stage. In the mutant, however, fewer fibers
were labeled. In contrast to control animals, only one of four mutant
embryos had any fibers projecting to the basal turn. In all mutants, at
least some of the radial afferents from the middle turn extended
tangentially toward the noninnervated basal turn (Fig.
2B). A similar tangential projection was never seen
in control embryos.
In control embryos at E13.5, there was a prominent radial projection
from basal turn cochlear ganglion neurons to the basal turn sensory
epithelium (Fig. 2D, inset). In contrast,
radial fibers were completely absent in the basal turn of
NT-3 mutants (Fig. 2C), and many fewer labeled
cochlear neurons and fibers were present in the rest of the cochlea.
Although not a single cochlear neuron fiber deviated from its normal
radial trajectory in the control animals, there was a prominent
deviating projection of middle turn cochlear neuron fibers in the
mutants directed toward the basal turn, spiraling along the cochlea
next to inner hair cells (Fig. 2C).
In control embryos and NT-3 mutant embryos at E14.5 and
later embryonic stages, the distributions of sensory neurons and their projections within the cochlea did not differ qualitatively from the
patterns observed at birth (Fritzsch et al., 1997c ) (Fig. 1). In
control embryos, a continuous and dense array of neurons in all turns
of the cochlea extended radial fibers to the sensory epithelium. The
density of radial bundles in NT-3 mutants, however, was
reduced throughout the developing cochlea except for the very apical
turn. Here, densely packed radial fibers were seen that appeared
qualitatively similar to those in control animals regarding their
spacing interval (Fig. 1B,C). In
NT-3 mutants, however, essentially no neurons survived in
the basal turn and, subsequently, no radially oriented fibers were
found in this portion of the cochlea (Fig. 1). In the noninnervated
basal turn, fibers from the middle turn portion were seen extending
tangentially along the line of IHC toward the tip of the basal turn
(Fig. 1C).
Cochlear afferent fibers to the basal turn are rescued at E13.5 in
NT-3 tgBDNF mice
We also compared the pattern of innervation of
NT-3 mutants at E13.5 with that of same-aged transgenic
animals in which the mouse NT-3 coding sequence was
replaced with BDNF (Fig. 2C,D). At this
stage, the basal turn innervation in NT-3
tgBDNF animals compared qualitatively well to
wild-type littermates (Fig. 2D, inset).
Specifically, there was a striking difference in the pattern of
innervation of the basal turn of the cochlea compared with
NT-3 mutants (Fig. 2C,D) suggesting a near
complete rescue of the NT-3 phenotype in this transgenic
mouse line. This rescue of basal turn afferent projection persisted in
newborn transgenic mice, and a full account of this phenotype is given by Coppola et al. (2001) .
Most cochlear neurons die by E15.5 in the absence of NT-3
The numbers of neurons present in the cochlear ganglion at
different stages of embryonic development have been quantitated, and
the data are presented in Table 1. At
E11.5, the vestibular and cochlear ganglia are not yet separate
structures, so the numbers of neurons in the combined (otic) ganglion
are presented. As shown in Table 1, there are only small, statistically
insignificant reductions in the numbers of otic neurons at E11.5 and
E13.5 in NT-3 mutants. Between E13.5 and E15.5, however,
73% of the neuronal complement of cochlear neurons are lost in the
NT-3 mutants. The neuronal loss is not homogeneously
distributed. At E15.5, all spiral neurons in the basal turn have
completely disappeared, whereas a number of neurons are still found in
middle and apical turns (data not shown). By E17.5 loss of neurons in
mutants (86%) is similar to that previously described in neonates
(84%) (Fariñas et al., 1994 ).
This dramatic embryonic loss can be most simply explained by cell death
of cochlear sensory neurons, especially of those in the basal turn. We,
therefore, examined the distribution and frequency of apoptotic
profiles in control and NT-3 mutant littermates (Table 2). Our previous work has not
revealed a difference between scoring apoptosis by terminal
deoxynucleotidyl transferase-mediated biotinylated UTP nick
end-labeling or by counting pyknotic profiles after cresyl violet staining (Fariñas et al., 1996 ). Therefore, we present here only the data gathered from conventionally stained material. Consistent with the loss of a large fraction of cochlear neurons between E13.5 and E17.5, we found increased cell death at E13.5 and
E15.5 in the ganglia of animals deficient in NT-3. In the cochlear ganglion, many of the pyknotic profiles were seen near its
posterior aspect and, therefore, most of the dying cells are likely to
be neurons that would have projected to the basal turn. These data
suggest that, in the absence of NT-3, the majority of cochlear sensory
neurons die between E13.5 and E15.5. In summary, there appears to be a
loss of the sensory projection to the basal turn before E13.5 that is
followed by elevated apoptosis of neurons over the following several
days.
To determine whether all cochlear neurons can respond to
BDNF and NT-3, we have examined Trk
receptor distribution, using antibodies that specifically recognize
TrkA, TrkB, and TrkC in histological
sections (Fariñas et al., 1998 ). Results in Figure 3 show that both trkB and trkC are
expressed in otic ganglia from E11.5 onward. Starting at E13.5, when
cochlear and vestibular sensory neurons can be first recognized as
separate ganglia, we detect TrkB and TrkC
coexisting in the cochlear sensory neurons (Fig. 3E-G).
Moreover, these receptors appear to be prominently expressed in the
growing neuronal processes invading the sensory epithelia (Fig.
3A,F). The apparently ubiquitous expression of TrkB and TrkC receptors in otic neurons suggests
that they can respond to either BDNF or NT-3 and
that the specific losses observed in the mutants are not attributable
to differential expression of Trk receptors.

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Figure 3.
Developmental expression of trkB
(A, C, E,
F) and trkC (B,
D, E, G) in developing
otic sensory neurons at E11.5 (A, B), E13.5
(C-E), and E15.5 (F, G). The
distribution of the trk proteins was revealed using specific primary
antibodies (Fariñas et al., 1998 ) and peroxidase
(A, B, F,
G), fluorescein (C, E), or rhodamine
(D, E) -conjugated secondary antibodies. trkB and trkC
are expressed in all otic neurons at early stages (A, B)
and in all cochlear neurons until at least E15.5 (F, G),
respectively. Fluorescent double labeling at E13.5 for both
trkB and trkC indicates that all cochlear
neurons express both trk proteins
(C-E). Scale bar (shown in E):
A, B, F, G,
100 µm; C-E, 25 µm.
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BDNF expression in the developing cochlea
In whole-mounted ears from
BDNFlacZneo heterozygous E10.5 embryos,
strong BDNF expression was observed in the posterior margin
of the forming cochlear duct (Fig.
4A). The E11.5 otocyst
showed distinct aggregations of BDNF-expressing cells in the
canal sensory epithelia. However, expression in the posterior canal
epithelium was continuous with the expression in the expanding cochlear
duct (Fig. 4B). Surprisingly, the expression at E12.5
was restricted to the sensory epithelia of the vestibular system, in
particular of the semicircular canals (Fig. 4C). In contrast
to the strong expression of BDNF observed in the growing
cochlear duct at E11.5 (Fig. 4A,B),
there was only a very faint expression in the E12.5 cochlea that was
restricted to the apical growing tip (Figs. 4C, 5A). At E13.5 and E14.5 the
expression of BDNF in the semicircular canals, utricle, and
saccule was even more pronounced (Fig. 4D) and, in
the cochlea, BDNF expression became stronger and extended further along the length of the cochlea (Fig. 4D),
but expression was not detected in the basal turn. At E16.5
BDNF expression was seen throughout the cochlea, similar to
the distribution found at birth (Fig. 1). Therefore, expression of
BDNF in the growing cochlea develops in an apical-to-basal
gradient and does not reach the base until E16.5.

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Figure 4.
Developmental expression of endogenous
BDNF (A-D) and
NT-3 (E-H) as revealed by
-galactosidase histochemistry in whole-mounted cochleas from
heterozygous animals with a lacZ reporter gene inserted
into the BDNF and NT-3 locus,
respectively. Arrows in E indicate
orientation. BDNF expression is first detected at E10.5
(A). Expression is strongest in the
posteroventral aspect, but it also forms a crest around the anterior
and dorsal aspect. The anteroventral aspect adjacent to the forming
otic ganglion is notably devoid of BDNF labeling.
Interestingly, this area receives the first growing fibers
(A). By E11.5 (B),
BDNF expression in the posteroventral quadrant has
intensified and is related to the growing cochlear duct, the
semicircular canal sensory epithelia, and the forming cochleovestibular
ganglion (Ggl). Streaks of
-galactosidase-positive cells (*) were seen apparently migrating
away from the otocyst and toward the forming ganglion and were even
more apparent at E12.5 (C) because of the more
distant spacing of the epithelia in the growing otocyst. Interestingly,
BDNF expression in the growing cochlea is sharply
downregulated at E12.5, except for a faint expression restricted to the
growing tip (C). The utricle
(U) and saccule (S) show
only faint and restricted expression at this stage. At E13.5
(D) and later, the expression remains rather
stable in all sensory epithelia, except for a progressive upregulation
of BDNF that proceeds toward the base of the cochlea. In
contrast to BDNF, expression of NT-3 at
E10.5 (E) forms two continuous patches, the
primordia of the future utricle and of the future saccule and cochlea.
Faint NT-3 expression is also visible in the forming
otic ganglion (Ggl), in streaks of cells
extending from discrete regions of the otocyst to the otic ganglion
(*), and in the endolymphatic duct. By E11.5 (F),
the -galactosidase-positive utricle and saccule + cochlea (S + C) have segregated. By E12.5 (G), the
NT-3-positive portion comprises only a fraction of the
total otic ganglion, and the saccule and cochlea are beginning to
segregate. By E13.5 (H), the utricle,
saccule, and cochlea are anatomically distinct from each other, and all
of them are intensely positive. Note that the ganglion was removed for
clarity in H. The gap between the saccule and the
cochlea turns into the ductus reuniens (DR). There is
some expression of NT-3 in the sensory cristae of the
three semicircular canals (anterior, horizontal, posterior).
AC, Anterior crista; C, cochlea;
ED, endolymphatic duct; Ggl, otic
(cochleovestibular) ganglion; HC, horizontal crista;
PC, posterior crista. Scale bars: 100 µm.
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Figure 5.
Expression of BDNF (A,
B) and NT-3 (C, D) in the cochlea
at E12.5. Arrows in A indicate
orientation, and dashed lines in A,
C indicate plane of section for B,
D. Note that BDNF expression is very
faint and restricted to the apex of the cochlea
(A). In contrast, NT-3 expression is more robust,
although it is absent from the very apical tip
(C). Plastic sections (10 µm thick) of
X-gal-reacted cochleas show that BDNF expression in the
base is restricted to an area of the cochlear duct that will become the
Reissner's membrane (B). In contrast,
NT-3 expression is seen throughout the greater
epithelial ridge (GER), an area that will become the
organ of Corti and the inner spiral sulcus. Scale bars, 100 µm.
|
|
Sections through the otocyst showed that BDNF is initially
expressed in the otocyst wall at E10.5 and bears no clear relationship with future sensory epithelia. After the expression shifted to the
future sensory epithelia at E11.5, BDNF expression in the utricle, saccule, and canal epithelia BDNF was predominantly
in what appeared to be differentiating hair cells (data not shown). However, BDNF expression in the cochlea was not seen in
cochlear hair cells before E15.5. In the future sensory epithelium of
the cochlea, little BDNF expression was seen at E12.5. In
fact, at this stage, when very faint expression is seen in the growing cochlear apex, the -galactosidase product is found in nonsensory areas, specifically in what will become the Reissner's membrane (Fig.
5B), which separates the endolymph containing medial scala from the perilymph containing vestibular scala. At E15.5 and onward, an
apical-to-basal gradient of cochlear BDNF expression could be detected. BDNF expression was clearly seen in IHC and OHC
in the basal turn by E17.5 and later (Fig.
6G,H), but
even then, the area of the epithelium expressing this neurotrophin was
larger in the apex (Fig.
6E,F). In fact, diffuse
labeling persisted in the apex even at birth in both hair cells
and supporting cells (Fig. 6F).

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Figure 6.
Expression of NT-3
(A-D) and BDNF
(E-H) in the cochlea at birth as seen in whole
mounts (A, C, E,
G) and in 10-µm-thick (F, H) or
2-µm-thick (B, D) plastic sections. Note that in the
apical turn (A, B, E,
F), neither NT-3 (A,
B) nor BDNF expression (E,
F) is restricted to hair cells. In fact,
NT-3 expression is predominantly seen in supporting
cells that also express some BDNF. In contrast, in the
basal turn (C, D, G,
H), BDNF expression is restricted
to hair cells (G, H), whereas NT-3
is expressed by inner hair cells and their surrounding supporting
cells. D, Deiter's cells; GER, greater
epithelial ridge; I, inner hair cells; O,
outer hair cells; P, Pillar cells. Scale bar, 100 µm.
|
|
NT-3 expression in the developing cochlea
In whole-mounted ears from
NT-3lacZneo heterozygous E10.5 embryos, we
detected only a single patch of -galactosidase expression near the
anteroventral aspect. This patch may represent the combined anlage of
utricle, saccule, and cochlea (Fig.
4E-H). At E11.5, there are two
discrete domains of -galactosidase: a more dorsal patch,
corresponding to the utricle, and a more ventral patch, corresponding
to the saccular-cochlear anlage (Fig. 4F). The
latter showed more intense staining in the rostroventrally oriented tip of the growing cochlear duct. By E12.5, the segregation between the
utricle and the saccular-cochlear anlage was more distinct (Fig.
4G), and a gradient of -galactosidase staining along the cochlear-saccular axis became apparent. In fact, the future saccule expressed lacZ only in its inferior half (Fig.
4G). By E13.5, the ear has reached its definite form (Morsli
et al., 1998 ), and three areas of -galactosidase expression can be
distinguished (Fig. 4H) corresponding (dorsal to
ventral) to the utricle, the saccule, and the cochlea, except for the
growing tip of the latter (Figs. 4H, 5C).
In addition, weaker expression appeared around the canal sensory
epithelia at this stage in development. From E14.5 to birth, the
pattern of lacZ staining in the ear remained essentially
identical to that found at E13.5, except that the entire cochlea became
positive. Therefore, NT-3 appears to be expressed in the
cochlea as it grows in longitudinal extent.
At the cellular level, the embryonic expression of NT-3 in
the cochlear sensory epithelium shows dynamic spatiotemporal changes, including a longitudinal base-to-apex progression and a change in cell
type expressing this neurotrophin (embryonic expression by supporting
cells; neonatal expression by IHC). In sections through the cochlear
epithelium, the blue -galactosidase product was present throughout
the developing sensory epithelium at E12.5 (Fig.
5C,D). From E14.5 onward, NT-3
expression became restricted to supporting cells of the cochlear
epithelium, such as Deiter's cells, Pillar cells, and Border cells
with limited, if any, expression in sensory hair cells during embryonic
development. At birth, very faint NT-3 expression could be
found in IHC of the basal, but not the apical, turn (Fig.
6A-D). In the middle and apical turns,
expression was strongest in Deiter's cells and their phalangeal processes, followed by nearby Pillar cells (Fig. 6B).
There was also a shift in expression from outer to inner Pillar cells
following an apical-basal gradient (Fig.
6B,D). The greater epithelial ridge (GER) is an embryonic structure that disappears in neonatal
development, giving rise to the inner cochlear sulcus and the inner
hair cells. Many of these cells expressed NT-3 as assessed
using the LacZ reporter. In fact, around birth some were
more strongly labeled than the IHC (Fig. 6D). Thus,
NT-3 expression was detected in supporting cells, but not in
hair cells during embryonic development.
BDNF and NT-3 expression outside the sensory epithelia
In contrast to some previous in situ hybridization
studies (Pirvola et al., 1992 , 1994 ), but in agreement with others
(Schecterson and Bothwell, 1994 ), our data suggested that some cells
delaminating from regions of the various sensory epithelia express
either BDNF or NT-3. Specifically, cells
delaminating from the utricle, saccule, and the basal turn of the
cochlea express NT-3, whereas cells delaminating from the
apical turn of the cochlea, the utricle, and the canal epithelia
express BDNF (Fig. 4). In sections, these delaminating cells
appeared to derive from discrete areas of the sensory epithelia that
typically showed no other lacZ-positive cells. This suggests
that BDNF and NT-3 expression are induced at the
time of delamination. Expression of -galactosidase does not
colocalize with the presence of differentiated neurons, as identified
using TrkB and TrkC immunocytochemistry (Fig. 3).
These delaminated cells migrate away from the otocyst and are likely to
constitute the precursor cells for otic sensory neurons as they
aggregate near and occupy a region next to the differentiated otic
sensory neurons. The neurotrophin-expressing cells are likely to
constitute an early source of neurotrophins next to the forming otic
sensory neurons.
 |
DISCUSSION |
The lack of NT-3 or BDNF results invariably
in losses of cochlear neurons with clear spatial bias. NT-3
deficient mice lose as many as 84% of the cochlear neurons, resulting
in reduced density of projections in the middle and apical turns and a
complete loss of radial projections to the basal turn (Fritzsch et al.,
1997a ). Absence of BDNF results in a modest reduction of
cochlear neurons and their projections, with the largest reduction in
the apical turn (Bianchi et al., 1996 ). We characterize for the first
time the cochlear deficits during embryonic development caused by the absence of NT-3. In addition, we compare the distribution of
these neurotrophins and their receptors during prenatal development to
determine how spatially biased deficiencies are produced by the absence
of a single neurotrophin. We also compare the pattern of loss in three
independently generated NT-3 null mutations (Ernfors et al., 1995 ;
Liebl et al., 1997 ) and show strikingly similar phenotypes (Fig.
2) (Coppola et al., 2001 ). Thus, all NT-3 null mutants share
one phenotype, loss of basal turn sensory neurons, reduction of outer
hair cell innervation, and retention of inner hair cell innervation. We
cannot explain why Ernfors et al. (1995) concluded that all inner hair
cell innervation and the central auditory projections are lost in their
NT-3 null mutant because our data clearly show that this is not the
case (Fig. 2).
The generation of cochlear neurons proceeds in a basal-to-apical
direction, whereas birth of cochlear hair cells follows the opposite
gradient, from apex to base (Ruben, 1967 ). During embryonic development, all cochlear neurons appear to express both
trkB and trkC, and, therefore, can respond to
either neurotrophin (Fig. 3). However, the distributions of
BDNF and NT-3 in the cochlear epithelium show
very different longitudinal and radial developmental dynamics. Despite
expression in nonsensory areas of the apex, BDNF expression
appears to be largely restricted to hair cells (Pirvola et al., 1992 ,
1994 ; Schecterson et al., 1994 ; Wheeler et al., 1994 ) following the age
gradient of hair cell proliferation. In contrast, NT-3
expression in the cochlear epithelium follows the maturational gradient
of the cochlea, progressing from base to apex (Pujol et al., 1998 ). The
earliest differentiated cochlear neurons therefore project to a sensory
epithelium without mature hair cells. Consequently, basal turn cochlear
neurons must be supported initially by neurotrophins that are released
from other epithelial cell types. Only NT-3, but not
BDNF, is predominantly expressed in nonhair cells (Figs. 5,
6) (Pirvola et al., 1992 ) and can thus support cochlear neurons in the
basal turn until E15.5 (Fig. 7).

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Figure 7.
This scheme depicts the dynamics of
BDNF (green) and
NT-3 (pink) expression during
cochlear development (left column) and the effects of
transgenes and null mutations (right column). Note that
at E12.5, BDNF is restricted to the apex of the cochlea,
whereas NT-3 is prominently expressed in the base and
middle turn, mainly around the three rows of outer hair cells. Sensory
neurons (red circles) have become postmitotic in the
basal half and extend their fibers. By E14.5, the expression of
BDNF has expanded toward the most basal part of the
middle turn (mainly in inner hair cells), whereas NT-3
expression has expanded toward the growing apex (mainly in outer hair
cells). At E16.5, expression of both BDNF and
NT-3 extends throughout the cochlea longitudinally.
However, the basal turn expresses NT-3 around all hair
cells and in inner hair cells, whereas the apex has no expression in or
around inner hair cells. In contrast, BDNF expression is
found in all hair cells as well as faintly in supporting cells in the
apex, whereas it is restricted to hair cells in the middle and basal
turns. The arrows (Age, Maturation) refer
to hair cells only. NT-3 null mutants (right
column, middle) have no neurotrophin to support basal turn
sensory neurons. Surviving middle turn sensory neurons rearrange their
axonal trajectory toward the base. This seems to reflect the
progressive upregulation of BDNF in inner hair cells
(bottom). In contrast, the effect of BDNF
null mutation becomes apparent later and in the apex. Replacing
NT-3 with BDNF restores the innervation
of the basal turn (top). We propose that the
longitudinal gradients, which mimic the age gradient of the
cochlea in the case of BDNF and the maturation gradient
of the cochlea in the case of NT-3, are responsible for
the specific reduction of sensory neurons in the base of
NT-3 null mutants and in the apex of BDNF
null mutants. IHC's, Inner hair cells;
OHC's, outer hair cells.
|
|
Our results indicate that cochlear neurons in the basal turn degenerate
in the absence of NT-3 because BDNF is not
expressed in the basal turn epithelium at a critical time. As predicted by this interpretation, transgenic expression of BDNF under
control of the NT-3 promoter qualitatively rescues this
innervation deficit at E13.5 (Fig. 2D). A similar
rescue has been found in newborn transgenic mice (Coppola et al.,
2001 ). However, we cannot exclude the possibility that the additional
availability of excess BDNF in itself is related to the observed
rescue. Nevertheless, because there is some endogenous expression of
BDNF in developing hair cells of the middle and apical
turns, sensory neurons innervating these regions are partially rescued
by this neurotrophin in NT-3 null mutants. BDNF
expression, though, must not be high enough to compensate completely
for the loss of NT-3. The specific loss of cochlear
neurons in the apical turn of BDNF homozygous mutants may reflect insufficient expression of NT-3 at an early
stage. These details have not been recognized in previous in
situ studies that either did not cover some of the critical
stages or did not examine the basal turn because of the section plane
(Pirvola et al., 1992 ; Wheeler et al., 1994 ).
We have also detected neurotrophin expression very early in cells
delaminating from the otocyst (Fig. 4). Experimental data strongly
suggest that all inner ear sensory neurons derive from the otocyst
(d'Amico-Martel and Noden, 1983 ; Fritzsch et al., 1998a ). In
situ hybridization in mice have suggested that cells in this
region of the otocyst wall express FGF-3 (int-2) (Mansour et
al., 1993 ; McKay et al., 1996 ), FGF10 (Pirvola et al., 2000 ), GATA3
(Karis et al., 2001 ), NeuroD (Kim et al., 2001 ), BF1 (Hatini et al.,
1999 ), and ngn1 (Ma et al., 2000 ), although double in situ labeling is needed to determine if all these molecules are expressed in the same cells. Delaminated cells migrate rapidly away and
undergo further proliferation before aggregating to form the
postmitotic otic (cochleovestibular) sensory neurons (Altman and Bayer,
1982 ; Carney and Silver, 1983 ; Adam et al., 1998 ).
Previous in situ hybridization analyses in rats indicated
that these cells do not express the neurotrophins BDNF and
NT-3 (Pirvola et al., 1992 ) or their receptors
trkB and trkC during migration, but show
expression of trkA (Fritzsch et al., 1999 ). Limited data in
mice show some expression of BDNF mRNA in sensory neurons (Schecterson
and Bothwell, 1994 ). Here we show that, although these delaminating
cells do not express detectable levels of trkB or
trkC, they do express NT-3 and/or
BDNF. It seems likely that NT-3 and
BDNF expression can be more readily detected with the lacZ reporter than by in situ hybridization
(Fritzsch et al., 1999 ; Vigers et al., 2000 ). BDNF and
NT-3 are first induced in delaminating cells, thus
suggesting that the expression of NT-3 and BDNF
in these migratory cells is genuine and does not reflect the presence
of the reporter protein after the BDNF or NT-3
mRNA has disappeared.
These delaminating cells remain spatially segregated from the
postmitotic neurons that constitute the otic ganglion and disappear after completion of neurogenesis. Differentiated embryonic otic neurons
do not express NT-3 or BDNF, indicating that
neurotrophin expression is downregulated on neuronal differentiation.
However, otic neurons express trkB and trkC
(Pirvola et al., 1992 ), and their neurites grow toward the sensory
epithelium across the territory of neurotrophin-expressing precursor
cells. Therefore, it is possible that postmitotic neurons in the otic
ganglion may rely for initial support on NT-3 or
BDNF provided by cells present in the pathways traversed by
their axons.
Sensory neurons extend processes to their targets in the basal turn
before degenerating in the absence of NT-3. The delay of
~1 d between initial fiber outgrowth and fiber loss in neurotrophin mutants is comparable with that observed in the semicircular canals of
trkB mutants (Fritzsch et al., 1995 ) and BDNF
mutants (Bianchi et al., 1996 ). Studies in double
BDNF/NT-3 or trkB/trkC mutants are
needed to determine whether initial outgrowth requires neurotrophin support as previously suggested (Fritzsch et al., 1997a ).
In summary, we propose that basal turn cochlear neurons die in the
absence of NT-3 because it is the only neurotrophin
available to support these neurons during their initial innervation of
the cochlea. The opposed temporal gradients of cochlear neuron and hair
cell mitosis and differentiation (Ruben, 1967 ; Pujol et al., 1998 )
transform a temporal gradient of neurotrophin expression into a spatial
gradient of innervation loss (Fig. 7). The basal turn of mammals
represents a unique extension of the high-frequency range absent in
other vertebrates (Fay, 1992 ). Development of neurons in this region
requires NT-3, which is hardly expressed in the developing
avian ear (Pirvola et al., 1997 ). This suggests that acquisition
of novel parts of the cochlea is accompanied by a novel implementation
of an existing neurotrophin.
In this paper, we have shown that the developmental dynamics of
neurotrophin expression during cochlear development can explain the
gradient of neuronal loss observed in the NT-3 mutant.
Comparable dynamics of expression of NT-3 and other
neurotrophins are similarly likely to explain the patterns of neuronal
loss in the trigeminal and dorsal root ganglia. In each case, absence
of NT-3 has been shown to result in loss of neurons
expressing TrkB that are not lost in the absence of
TrkC and therefore appear to be activated directly by
NT-3 signaling through TrkB (Fariñas et
al., 1998 ; Huang et al., 1999 ). Neurons expressing TrkB are
lost immediately after neurogenesis. NT-3 is expressed in
the mesenchyme immediately adjacent to these ganglia during the period
of neurogenesis. As development proceeds, NT-3 is observed
in proliferating mesenchyme in limb bud and elsewhere, but expression
is lost in most of the differentiated cells derived from this
mesenchyme (Fariñas et al., 1998 ; Patapoutian et al., 1999 ). In
contrast, BDNF expression is not observed in the mesenchyme
immediately adjacent to the ganglia or in many of the regions
subsequently invaded by sensory fibers (E. Huang, K. R. Jones, and
L.F. Reichardt, unpublished observations). Thus, although these neurons
eventually innervate targets expressing BDNF, transient loss
of trophic support results in apoptosis. In the future, it will be
essential to understand the mechanisms that regulate the dynamic
expression of the various neurotrophins if we are to understand the
patterns of neuronal loss observed in wild-type and mutant animals
(Patapoutian et al., 1999 ).
 |
FOOTNOTES |
Received March 19, 2001; revised May 21, 2001; accepted June 1, 2001.
This work was supported in part by grants from the National Institute
on Deafness and Other Communication Disorders (P 50 DC 00215), the
National Organization of Hearing Research, and the Leda Sears Trust to
B.F. and D.C.D.; Ministerio de Educación y
Ciencia-Comisión Interministerial de Ciencia y
Tecnología, Spain (SAF99-0119-C0) and Fundació la
Marató de TV3 to I.F.; National Institutes of Health Grant KO1
NS01872 to A.J.V.; National Institute of Mental Health Grant 48200 to
L.F.R.; and a University of Colorado Junior Faculty Development Award,
a Muscular Dystrophy Association grant, and a Burroughs-Wellcome New
Investigator in Pharmacology Award to K.R.J. B.F. thanks C. Miller
for excellent assistance with the TEM and SEM preparations and
for her dark room work and M. Christensen for her help with
immunocytochemistry. L.F.R. is an Investigator of the Howard Hughes
Medical Institute.
I.F., K.R.J., and L.T. contributed equally to this paper.
Correspondence should be addresssed to Dr. B. Fritzsch,
Department of Biomedical Sciences, Creighton University, Omaha, NE 68178. E-mail: Fritzsch{at}Creighton.edu.
 |
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