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The Journal of Neuroscience, 2001, 21:RC136:1-4
RAPID COMMUNICATION
Evidence for a Common Binding Cavity for Three General
Anesthetics within the GABAA Receptor
Andrew
Jenkins1,
Eric P.
Greenblatt2,
Howard J.
Faulkner3,
Edward
Bertaccini4,
Adam
Light5,
Audrey
Lin5,
Alyson
Andreasen1,
Anna
Viner1,
James R.
Trudell4, and
Neil L.
Harrison1
1 C. V. Starr Laboratory for Molecular
Neuropharmacology, Department of Anesthesiology, Weill Medical College
of Cornell University, New York, New York 10021, 2 Department of Anesthesia, University of Pennsylvania
School of Medicine, Philadelphia, Pennsylvania 19104, 3 Imperial College School of Medicine, London SW7 2AZ,
United Kingdom, 4 Department of Anesthesia, Stanford
University School of Medicine, Stanford, California 94305, and
5 The University of Chicago, Chicago, Illinois 60637
 |
ABSTRACT |
The GABAA receptor is an important target for a
variety of general anesthetics (Franks and Lieb, 1994 ) and for
benzodiazepines such as diazepam. Specific point mutations in the
GABAA receptor selectively abolish regulation by
benzodiazepines (Rudolph et al., 1999 ; McKernan et al., 2000 ) and by
anesthetic ethers (Mihic et al., 1997 ; Krasowski et al., 1998 ;
Koltchine et al., 1999 ), suggesting the existence of discrete binding
sites on the GABAA receptor for these drugs. Using
anesthetics of different molecular size (isoflurane > halothane > chloroform) together with complementary mutagenesis
of specific amino acid side chains, we estimate the volume of a
proposed anesthetic binding site as between 250 and 370 Å3. The results of the "cutoff" analysis suggest a
common site of action for the anesthetics isoflurane, halothane, and
chloroform on the GABAA receptor. Moreover, the data
support a crucial role for Leu232, Ser270, and Ala291 in the subunit in defining the boundaries of an amphipathic cavity, which can
accommodate a variety of small general anesthetic molecules.
Key words:
anesthetic; GABA; binding site; allosteric; receptor; molecular volume
 |
INTRODUCTION |
Many
general anesthetics with simple chemical structures prolong the
duration of synaptic inhibition via allosteric regulation of
GABAA receptors (Jones and Harrison, 1993 ;
Nishikawa and MacIver, 2000 ). Reciprocal synaptic connections
between cortical interneurons can generate high-frequency (30-60 Hz)
oscillatory activity (Jefferys et al., 1996 ), and entrainment of these
local inhibitory microcircuits results in synchronization of these
"gamma oscillations" (Whittington et al., 1995 ). Such
high-frequency activity has been linked to cognitive functions such as
selective attention (Bragin et al., 1995 ), and these oscillations are
highly sensitive to disruption by central depressants (Faulkner et al.,
1998 ). GABAergic inhibition plays a fundamental role in the timing of
these high-frequency oscillations, so that drugs that prolong the time
course of synaptic inhibition also decrease the characteristic
frequency of these oscillations (Whittington et al., 1996 ), eventually
imposing slow, high-amplitude waves in both the EEG and in
vitro model systems. Decreases in the EEG spectral edge frequency
accompany decrements in cognitive function during the induction of
anesthesia (Rampil, 1998 ). GABAA receptors
therefore represent one of the major neurobiological substrates for the
action of general anesthetics, especially with regard to the ability of
these drugs to induce hypnosis and loss of consciousness (Franks and
Lieb, 1994 ).
Inhaled anesthetics alter the function of
GABAA receptors in acutely dissociated neurons
(Nakahiro et al., 1989 ; Wakamori et al., 1991 ; Li and Pearce,
2000 ) and in heterologous expression systems (Harrison et al., 1993 ;
Mihic et al., 1997 ; Jenkins et al., 1999 ). The modulatory action of
these inhaled agents, unlike that of diazepam, is independent of the
subunit of the GABAA receptor (Harrison et
al., 1993 ; Krasowski et al., 1998 ; Koltchine et al., 1999 ). In this
study, we have therefore examined the action of these anesthetics on
GABAA receptors consisting only of and subunits. GABAA receptor modulation by the
anesthetic ether isoflurane is abolished by a point mutation at S270 in
the TM2 segment of the subunit (Mihic et al., 1997 ; Krasowski et
al., 1998 ), whereas the effects of diazepam and other sedative-hypnotic benzodiazepines are abolished by mutating H101 to arginine in the large
extracellular N-terminal domain of the subunit (Rudolph et al.,
1999 ; McKernan et al., 2000 ). However, although it is known that
flunitrazepam binds to H101 but not R101 (Duncalfe et al., 1996 ), it is
not known why S270 permits receptor modulation by isoflurane, whereas
an isoleucine residue at this position does not. The present study
probes the involvement of S270 and of two other residues in greater
detail and extends our analysis of anesthetic action to include the
alkanes halothane and chloroform.
 |
MATERIALS AND METHODS |
Site-directed mutagenesis and electrophysiology. To
create the mutant series at GABAA receptor 2
Ser270, mutations were introduced into the cDNA encoding the human
GABAA receptor 2 subunit at bases 890 to 892, with simultaneous loss of a DdeI restriction site (Koltchine
et al., 1999 ). Additional mutations were created at Ala291 and Leu232
using either the Unique Site Elimination method (Amersham
Pharmacia Biotech, Arlington Heights, IL) or a Pfu
polymerase/DpnI selection method (QuikChange; Stratagene, La
Jolla, CA). The sequences of all cDNA inserts were confirmed throughout
by double-stranded sequencing. Human embryonic kidney (HEK) 293 cells were maintained in culture on glass coverslips and transfected
with cDNAs encoding wild-type or mutant 2 subunits and wild-type
1 subunits. Recordings were made using the whole-cell patch-clamp
technique as described previously (Koltchine et al., 1999 ). All drugs
and solutions were applied rapidly to the cell by local perfusion using
a motor-driven solution exchange device; recordings were made at room
temperature (20-22°C). Bath concentrations of the anesthetics were
measured using gas chromatography and represent 90-95% of the total
applied drug concentration. Numerical data are presented throughout as
mean ± SE. Concentration-response curves were determined for the
wild-type and each mutant GABAA receptor
(Koltchine et al., 1999 ). Potentiation of a submaximal GABA response by
each anesthetic was then calculated as the percentage increase above
the control (EC20) response to GABA in the
presence of anesthetic (Koltchine et al., 1999 ).
Molecular volume calculation. Molecules were built in
Spartan V5.1 (Wavefunction, San Diego, CA) and optimized with the Merck MMFF94 forcefield. The calculated volumes are van der Waals volumes and
are given in Å3.
 |
RESULTS |
Different mutations are required to remove sensitivity to
different anesthetics
The wild-type 2 1 GABAA receptor
is potentiated by isoflurane and halothane (Fig.
1a). The mutant receptor
2(S270H) 1 is insensitive to isoflurane (Krasowski et al., 1998 )
but shows normal sensitivity to the alkane anesthetic halothane (Fig.
1b). This finding initially suggested to us that S270 in TM2
might participate in binding isoflurane, but not halothane. The TM1
segment of the homologous glycine receptor was recently inferred to
confer sensitivity to halothane (Greenblatt and Meng, 1999 ); we
subsequently observed that the mutant GABAA
receptor 2(L232F) 1 was insensitive to halothane, whereas
sensitivity to isoflurane remained (Fig. 1c). This finding
suggested initially that L232 in TM1 might participate in binding
halothane, but not isoflurane, and pointed to the possibility that
these two anesthetics might act at different sites on the GABAA receptor. However, when a larger Trp
residue was introduced at S270, the mutant receptor 2(S270W) 1 was
shown to lack sensitivity to halothane, as well as isoflurane (Fig.
1d). Interestingly, this receptor retained sensitivity to a
third anesthetic, chloroform (Fig. 1e). Mutation at A291 in
TM3 of the subunit has previously been shown to abolish receptor
regulation by isoflurane (Krasowski et al., 1998 ), and we therefore
added a second Trp residue at this position to create the double mutant
2(S270W;A291W) 1 receptor. This receptor was completely
insensitive to chloroform (Fig. 1e), isoflurane, and
halothane, but retained sensitivity to propofol (data not shown), an
anesthetic believed to exert its actions via a site on the subunit
(Sanna et al., 1995 ; Krasowski et al., 1998 ).

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Figure 1.
Effects of three general anesthetics on wild-type
and mutant GABAA receptors. All receptors were expressed in
HEK 293 cells and studied using whole-cell voltage-clamp recording at
60 mV (Krasowski et al., 1998 ). Currents were activated by
EC20 concentrations of GABA. a, Isoflurane
and halothane enhance responses to GABA in wild-type 2 1
GABAA receptors. b, In mutant
2(S270H) 1 receptors, the enhancing effect of isoflurane is
absent, whereas the halothane effect is preserved. c, In
mutant 2(L232F) 1 receptors, the enhancing effect of halothane is
absent, whereas the isoflurane effect is preserved. d,
In mutant 2(S270W) 1 receptors, neither halothane nor isoflurane
enhances GABA responses. e, Effects of chloroform
on wild-type and mutant GABAA receptors. Chloroform
potentiated the actions of GABA in wild-type 2 1 GABAA
receptors, and this effect was preserved in mutant 2(S270W) 1
receptors but abolished in the double mutant
2(S270W;A291W) 1 receptor. The anesthetic concentrations
used in the figures were as follows: isoflurane, 0.5 mM;
halothane, 0.32 mM; and chloroform, 0.9 mM.
Calibration: 50 pA (vertical axis), 10 sec (horizontal
axis).
|
|
The idea that the three residues (L232, S270, and A291) could be
mutated to selectively or completely remove anesthetic modulation was
then tested further. The S270W mutation was sufficient to remove
isoflurane and halothane sensitivity, whereas the L232F mutation was
sufficient to block potentiation by halothane but not isoflurane; in
light of these observations, we also mutated L232 to tryptophan. The
2(L232W) 1 receptor expressed at normal levels and, like the
2(S270W) 1 receptor, was insensitive to potentiation by both
halothane ( 1.5 ± 4.8%; n = 20 cells) and isoflurane (5.8 ± 4.6%; n = 20 cells).
Anesthetics of dissimilar size have different cutoffs
The isoflurane sensitivity of the GABAA
receptor appears to show a cutoff effect when the receptor is
mutated to increase the size of the residue at 270 (Koltchine et
al., 1999 ). Specifically, in the series of mutant receptors
2(S270X) 1, these receptors become insensitive to isoflurane
(molecular volume 144 Å3; Fig.
2a), because the volume of the
side-chain is increased beyond the volume of threonine, i.e., after a
change in volume V > 30 Å3 (Fig.
2a). We repeated this analysis with the physically smaller anesthetics halothane (molecular volume 110 Å3) and chloroform (molecular volume 90 Å3), and in each case, a cutoff
phenomenon was again observed. However, the cutoff occurred at larger
side chain volumes than for isoflurane. For halothane this occurs
between V = 100-140 Å3 (Fig.
2b), whereas for chloroform the cutoff occurs between
V = 240-280 Å3 (Fig.
2c).

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Figure 2.
The effect of the addition of molecular volume by
mutagenesis at positions 270 or 291 on GABAA receptor
regulation by three anesthetics. Above the figure are representations
of the molecular volumes of the three anesthetics.
a, Addition of molecular volume produces a cutoff for
isoflurane at V = 30-40 Å3.
b, A cutoff is observed for halothane at
V = 140 Å3. c, A
cutoff for chloroform is not observed until V = 280 Å3. The data for each anesthetic at each mutant
receptor are expressed as the mean ± SEM of the percentage
enhancement (potentiation) of the current response to an
EC20 concentration of GABA appropriate to that receptor,
plotted against V, the increase in molecular volume
produced by mutagenesis.
|
|
 |
DISCUSSION |
Multiple cutoffs suggest a common interaction site for three
general anesthetics
We explain these experimental data by proposing that the
side-chains at the key positions L232, S270, and A291 (in transmembrane segments TM1, TM2, and TM3, respectively, of the subunit) define a
binding cavity for small anesthetic molecules. Given our knowledge of
the molecular volumes of the anesthetics and the cutoff data from our
experiments, the volume of this hypothetical cavity can be estimated as
between 250 and 370 Å3. The introduction
by mutagenesis of bulky side chains at the critical sites presumably
decreases the molecular volume of the anesthetics that can be
accommodated within such a cavity. It should be noted that these cutoff
effects are independent of anesthetic concentration (Koltchine et al.,
1999 ).
The present results highlight the importance of the TM domains for
receptor activation and regulation; mutating selected residues in the
TM1 (Thompson et al., 1999 ), TM2 (Koltchine et al., 1999 ), and
TM3 (Krasowski and Harrison, 2000 ) domains often results in changes in
GABA EC50. These mutations also affect the
sensitivity of the receptor to a variety of allosteric modulators. For
example, in addition to the changes in anesthetic sensitivity reported here, a mutation in TM1 1(T230I) renders 1* 3 2s receptors
more sensitive to the 6-specific noncompetitive antagonist
furosemide; a similar result can be achieved by mutating (N265) in the
3 subunit (Thompson et al., 1999 ).
Three additional features of the experimental data are
noteworthy. First, the data for the L232F and S270H mutants suggest that the anesthetics do not fit into the putative binding cavity in an
identical manner; isoflurane (unlike halothane) is active at the L232F
mutant receptor, whereas halothane (unlike isoflurane) is active at the
S270H mutant. This could be explained if halothane makes a closer
contact with L232 than does isoflurane, which may instead lie closer to
S270, accounting for the very sharp cutoff in Figure 2a. The
loss of sensitivity to both isoflurane and halothane after additional
volume is added in the L232W or S270W mutants supports this idea and
suggests that these two residues are part of the same cavity. Second,
whereas the ability of isoflurane to enhance GABA currents falls off
drastically as side-chain volume is increased at the 270 position, from
serine to phenylalanine, halothane actually increases in effectiveness
as the residue at 270 is expanded, before reaching the cutoff point at
tryptophan. It is possible that for halothane (unlike isoflurane), the
binding interactions with TM2 may be suboptimal in the wild-type
receptor and are actually improved by the addition of a bulky side
chain at 270. Finally, there is a marked discontinuity in the data for chloroform, at ~ V = 40 Å3. One explanation for this observation
would be a change from a cavity occupied by two chloroform molecules in
the Asn mutant to a singly occupied cavity in the Glu mutant. If a
cavity of >250 Å3 does exist within the
wild-type subunit, it should be possible for two molecules of
chloroform (90 Å3) to bind simultaneously
within such a cavity. There are existing precedents for double
occupancy of cavities by general anesthetic molecules; for example, two
molecules of halothane arranged in a head-to-head orientation are found
within one of the anesthetic binding sites in human serum albumin (HSA)
(Bhattacharya et al., 2000 ).
Small cavities bind general anesthetic molecules
Small cavities have been demonstrated to exist in a variety of
globular proteins, both natural (Tilton et al., 1984 ; Eriksson et al.,
1992 ; Kono et al., 2000 ) and synthetic (Johansson et al., 2000 ) in
origin, and these can be altered in size and shape by mutagenesis of
appropriate residues (Eriksson et al., 1992 ; Brunori et al., 2000 ; Kono
et al., 2000 ; Lee et al., 2000 ). Anesthetics and other small gas
molecules have been demonstrated to occupy such cavities, using a
variety of techniques (Tilton et al., 1984 ; Franks et al., 1998 ;
Brunori et al., 2000 ; Johansson et al., 2000 ). The binding of
the anesthetic bromoform within a cavity in the enzyme firefly
luciferase has been demonstrated using x-ray crystallography (Franks et
al., 1998 ). Binding of such small ligands to protein cavities is often
accompanied by the displacement of bound water molecules (Rashin et
al., 1986 ; Matthews et al., 1995 ), and the interactions are further
stabilized by low-energy ( 2-4 kcal/mol) van der Waals interactions
with the cavity surface. The resulting free energy changes, although
small, are commensurate with the relatively small energy changes
associated with the gating of ligand-gated ion channels and are
consistent with the low potencies for the anesthetic agents studied
here
(10 4-10 3
M). More recently, Bhattacharya et al. (2000) have obtained
the high-resolution (2.4 Å) structure of halothane bound to HSA. In all of these cases, anesthetic binding produced no change in local or
global protein structure. Instead, the halothane molecules simply
occupied pre-existing cavities and made contacts with small polar and
apolar amino acids forming the cavity walls.
An anesthetic binding cavity of defined volume in the
GABAA receptor
The existence of a similar cavity or "crevice" within the
GABAA receptor is supported by data from scanning
cysteine accessibility mutagenesis experiments on TM3 in the subunit (Williams and Akabas, 1999 ). Moreover, recent experiments using
cysteine substitutions in the transmembrane domain of the subunit
also indicate that Ser270 is likely to be involved in binding molecules
such as ethanol and isoflurane. Mascia et al. (2000) showed that in the
2(S270C) mutant, an alkanethiol anesthetic and the sulfhydryl
reagent propyl methanethiosulfonate produced an irreversible
enhancement of receptor function. Furthermore, once alkylated, the
2(S270C) mutant was insensitive to isoflurane. These data suggest
that 2(S270) is indeed involved in the binding of these anesthetic molecules.
The cutoff data reported here predict that the receptor should be
modulated by molecules larger than isoflurane. This is indeed the case;
halogenated ether anesthetics (sevoflurane; 154 Å3) and long-chain alcohols (decanol;
234Å3) both potentiate
GABAA receptor function (Dildy-Mayfield et al., 1996 ; Krasowski and Harrison, 2000 ). Interestingly, Ser270 is also
critical for the action of alcohols (Mihic et al., 1997 ; Mascia et al.,
2000 ) and so it is important to note that the cutoff for the actions of
the n-alkanols on the GABAA receptor
occur between decanol and dodecanol, i.e., somewhere between 234 and 276 Å3 (Dildy-Mayfield et al., 1996 );
mutations at the homologous I307 residue in human GABA 1 or the S267
residue in human GlyR 1 alter alcohol cutoff in these related
receptors (Wick et al., 1998 ).
In conclusion, we suggest that modulation of
GABAA receptor function by small general
anesthetic molecules results from occupation of a cavity of volume
~250-370 Å3, the surface of which is
partly defined by L232, S270, and A291. It is therefore of considerable
interest that cutoff data from in vivo experiments also
point to a maximal volume for anesthetic activity of ~340
Å3 (Curry et al., 1991 ).
 |
FOOTNOTES |
Received Aug. 21, 2000; revised Jan. 10, 2001; accepted Jan. 17, 2001.
This work was supported by National Institutes of Health Grants
GM 45129 to N.L.H. and GM 57062 to E.P.G. We thank Peter Goldstein for
critical reading of this manuscript and Suzanne Finn and Irene Paraskevakis for mutant cDNAs.
Correspondence should be addressed to Andrew Jenkins, C. V. Starr
Laboratory for Molecular Neuropharmacology, Department of Anesthesiology A-1050, Joan and Sanford I. Weill Medical College of
Cornell University, 525 East 68th Street, Box 124, New York, NY 10021. E-mail: anj2005{at}med.cornell.edu.
This article is published in
The Journal of Neuroscience, Rapid Communications Section,
which publishes brief, peer-reviewed papers online, not in print. Rapid
Communications are posted online approximately one month earlier than
they would appear if printed. They are listed in the Table of Contents
of the next open issue of JNeurosci. Cite this article as:
JNeurosci, 2001, 21:RC136 (1-4). The
publication date is the date of posting online at
www.jneurosci.org.
 |
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