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The Journal of Neuroscience, May 15, 2002, 22(10):4002-4014
Evidence of Common Progenitors and Patterns of Dispersion in Rat
Striatum and Cerebral Cortex
Christopher B.
Reid1, 2 and
Christopher A.
Walsh3, 4, 5
1 Department of Pharmacology and
2 Neuroscience Program, F. Edward Hebert School of
Medicine, Uniformed Services University, Bethesda, Maryland 20814, 3 Division of Neurogenetics, Department of Neurology, Beth
Israel Deaconess Medical Center, Harvard Institutes of Medicine,
Boston, Massachusetts 02115, and 4 Program in Neuroscience
and 5 Program in Biological and Biomedical Sciences,
Harvard Medical School, Boston, Massachusetts 02115
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ABSTRACT |
To correlate clonal patterns in the rat striatum with adult
neuronal phenotypes, we labeled striatal progenitors between embryonic day 14 (E14) and E19 with a retroviral library encoding alkaline phosphatase. In the adult striatum, the majority of E14-labeled neurons (87%) were members of discrete horizontal or radial cell clusters. Radial clusters accounted for only 23% of cell clusters but
>34% of labeled cells. Striatal clones also demonstrated an unexpected widespread pattern of clonal dispersion. The majority of
striatal clones were widely dispersed within the striatum, and 80% of
clones were part of even larger clones that included cortical
interneurons. Finally, we observed that PCR-positive cortical
interneurons were members of clones containing both interneurons and
pyramids (44%), exclusively interneuron clones (24%), or combined striatal-cortical clones (16%), consistent with the view that cortical interneurons have multiple origins in differentially behaving
progenitor cells. Our data are also consistent with the notion that
similar mechanisms underpin striatal and cortical development.
Key words:
cortex; striatum; radial migration; tangential migration; clonal analysis; pyramidal neuron; nonpyramidal neuron; interneurons; radial glia
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INTRODUCTION |
In spite of striking differences in
overall organization, striatum and cortex are increasingly seen as
developmentally interconnected. The striatum, comprised of
caudate-putamen, nucleus accumbens, and olfactory tubercle, is
remarkable for its relatively homogenous structure. The striatum lacks
the laminar organization displayed in the cerebral cortex. Striatal
neurons are defined, instead, according to their location in patch or
matrix compartments. Patch and matrix regions are interspersed, but
identifiable, according to their contrasting neurochemical profiles and
connectivity (Graybiel and Ragsdale, 1978 ; Herkenham and Pert, 1981 ;
Gerfen, 1984 , 1985 ). The striatum is composed principally of medium
spiny, projection neurons (DiFiglia et al., 1976 ; Wilson and Groves,
1980 ) that account for 90% of the cellular complement (Kemp and
Powell, 1971 ) and represent the major target of cortical inputs
(Somogyi et al., 1981 ). Interneurons of various classes comprise the
remaining 10%.
Neurogenesis in striatum and cortex occurs over the same developmental
epoch, and the striatum appears to be a source of cortical neurons.
Involvement of tangential migration in the distribution of cortical
interneurons was first suggested by microscopic examination of
developing forebrain (Van Eden et al., 1989 ; De Diego et al., 1994 ). More recently, DiI tracing techniques directly demonstrated migration from lateral ganglionic eminence (LGE) to cerebral cortex (De
Carlos et al., 1996 ; Anderson et al., 1997b ; Tamamaki et al., 1997 ).
Finally, migration of presumptive neurons was observed from medial
ganglionic eminence (MGE) (Lavdas et al., 1999 ; Sussel et al., 1999 ;
Anderson et al., 2001 ). Cells arriving to the cortex from LGE express
Dlx-1 and Dlx-2 and appear to differentiate into GABAergic interneurons (Anderson et al., 1997b , 1999 ). In light of
these studies, striatal development can now be recognized as much more
complex than previously thought, however the basic patterns of
migration and differentiation underlying striatal development have not
been fully elucidated.
The migration of neurons from ganglionic eminence to cortex raises
fundamental questions about neuronal precursors in striatal proliferative zones. We wondered, what, for instance, is the potential of striatal progenitors. Do common progenitors produce cells destined for both striatum and cerebral cortex, or does the ganglionic eminence
contain a mixed population of progenitors restricted to a cortical or
striatal fate?
Although striatal cell lineage has been previously studied (Halliday
and Cepko, 1992 ; Krushel et al., 1993 ) the present study was undertaken
to determine clonal relationships among dispersed cells in the mature
brain. We successfully labeled striatal and cortical neurons in nine
experiments between embryonic day 14 (E14) and E19. We frequently
observed neuronal clusters after E14 injection and P14 analysis, but
only occasional clusters after E19 injections. PCR confirmed sibling
relationships among clustered neurons and revealed widespread
dispersion of clonally related cells in the mature striatum.
Amplification of DNA tags also demonstrated a high frequency of clones
dispersing between striatum and cortex and involving cortical
interneurons in a single experiment. Finally, the pattern of dispersion
in clones containing cortical interneurons suggests that cortical
interneurons have multiple origins in developing telencephalon.
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MATERIALS AND METHODS |
Alkaline phosphatase-encoding retroviral library. The
preparation and composition of the alkaline phosphatase (AP)
retroviral library used for these experiments is described elsewhere
(Reid et al., 1995 ). In brief, the AP library was derived from 3400 clones containing genomic DNA fragments cloned into the XhoI
site of the DAP vector (Fields-Berry et al., 1992 ). The AP library contains between 100 and 400 distinct retroviral constructs at approximately equal titer.
Animal surgery. Timed-pregnant Long-Evans rats were
purchased from Charles Rivers Laboratories (Wilmington, MA).
Pregnancies were timed from the day after breeding (E0). Birth usually
occurred on E21. Surgical procedures and injection of the retroviral
supernatant into the lateral ventricles of the fetal rat brains are
described in detail elsewhere (Walsh and Cepko, 1992 ). To label
early-born as well as late-born striatal neurons, we made retroviral
injections at the earliest feasible stages of development. Progenitors
for the various striatal cell types were infected by injecting 2-4 µl of the AP encoding retroviral library into the lateral ventricles of fetal rats between E14 and E19. The titer of retroviral supernatants varied from 1 to 20 × 106
colony-forming units/ml. The half-life of the virus at 37°C was ~4
hr; therefore, retroviral infection can be reasonably regarded as
occurring during brief time windows.
Histology and analysis of clones. Animals were killed
14 d after birth by an overdose of Nembutal and perfused with
2-4% paraformaldehyde in 2 mM
MgCl2 and 1.25 mM EGTA in
0.1 M PIPES buffer, pH 7.2. Brains were removed
and submerged in fixative overnight at 4°C, then transferred to 30%
sucrose in PBS at 4°C until they sank. Brains were sectioned
at 100 µm thickness using a Bright cryostat, and sections were
mounted onto gel-coated glass slides. Sections were later processed for
AP activity according to protocols presented elsewhere (Cepko et al.,
1995 ). Labeled striatal cells were detected by microscopic examination
of tissue sections. AP expression in cell bodies and processes usually
allowed identification of most labeled cells as neurons or glia.
Cortical cell types were frequently discernible in AP-stained sections
according to standard morphological criteria (for review, see Peters
and Jones, 1984 ). The pyramidal neurons of layer III and V were
identified according to their dominant apical dendrites that give off
branches as they extend from the cell body to the pial surface. These
neurons were also identified according to the shape of their cell
bodies and by the presence of basal dendrites. The apical dendrites of
most layer III and V pyramidal neurons end in a spray of terminal
branches at the pia, however other "modified" pyramidal neurons in
layer II may display very short and/or divaricated apical dendrites.
Alternatively, these neurons may not show apical dendrites at all, but
instead possess layer I terminal tufts that arise directly from the
cell body. Other "modified" pyramidal neurons found in layer VI
often show apical dendrites that arise from the lateral aspect of the
side of the cell body or from a basal dendrite before extending as far
as layer IV. Finally the pyramidal neurons of layer IV often display round cell bodies, relatively thin apical dendrites, and thick dendrites radiating in all directions (Peters and Jones, 1984 ).
In contrast to the morphologies described above, nonpyramidal neurons
are so called because they lack those characteristics typical of
pyramidal neurons. They appear in a large variety of sizes, have a
variety of dendritic and axonal configurations, and may have sparsely
spiny, very spiny, or smooth processes (Peters and Jones, 1984 ).
Nonpyramidal neurons were, nevertheless, often recognizable in our
preparations as bipolar neurons, basket cells, or bitufted neurons.
Bipolar neurons typically have single dendrites extending from superior
and inferior poles to form narrow, vertically oriented dendritic trees.
The dendrites of multipolar neurons, on the other hand, may arise from
any surface of the cell body without a preferred orientation. Finally,
bitufted cells demonstrate multiple dendrites extending as tufts from
opposite poles of an ovoid or elongated cell body.
In AP-injected brains the locations of labeled cells were recorded by
photography and/or camera lucida drawings. Rostrocaudal location was
determined by counting section number and multiplying by the section
thickness (100 µm). The rostral tip of the olfactory bulb was
designated as the origin. These values were used to calculate anteroposterior (A-P) dispersion. Dispersion perpendicular to the A-P
axis (in the mediolateral plane as well as the superioinferior plane)
was regarded as tangential dispersion. Tangential dispersion within
cortical clones was measured directly on low-power camera lucida
drawings of whole sections. Maximal A-P and tangential dispersion plots
(shown in Fig. 8) were created using the Mathematica software program.
This program was also used to perform linear regressions for different
clone types (see Fig. 8, legend).
Consistent with previous analyses, neuronal clusters in the striatum
were defined as cells separated by <500 µm (Krushel et al., 1993 ).
Most clusters were composed of similar appearing, similarly situated neurons.
Clonal analysis with PCR. Tissue analysis was performed by
preparing DNA samples from labeled cells for amplification by PCR, as
presented elsewhere (Walsh and Cepko, 1992 ; Walsh, 1995 ).
Briefly, coverslips were removed in a 50 ml centrifuge tube filled with sterile water. Small tissue fragments (~100 × 200 × 200 µm) containing the nucleus of each labeled cell were dissected using
a fresh razor blade edge. Tissue fragments were digested in 10 µl of
proteinase K (0.2 mg/ml) in 1× PCR buffer (in mM:
2.5 MgCl2, 50 Tris buffer, pH 8.3, 25 KCl, and 0.5% Tween 20) at 65°C for 4-24 hr. Each well was covered
with 30 µl of mineral oil to prevent evaporation. Samples were then
heated to 85°C for 20 min to inactivate proteinase K and then 95°C
for 5 min to denature the DNA. A nested PCR protocol was used to
increase the sensitivity and specificity of amplification and is
described elsewhere (Walsh and Cepko, 1992 ; Walsh, 1995 ). At least 10%
of all PCR reactions were negative controls, consisting either of
unlabeled tissue or reagents alone. None of the negative controls in
this study showed amplified DNA.
Analysis of PCR products. PCR products from the second PCR
reaction were separated on 3:1% NuSieve-Seakem agarose gels to determine tag sizes. Each tag was then digested with CfoI,
RsaI, AluI, MseI, and MspI.
Digested DNA samples of similar predigest size were run side by side on
agarose gels to allow direct comparison of restriction fragments. PCR
products of similar initial size and restriction digest pattern were
interpreted as indicating a common progenitor. Dissimilar tag size or
restriction patterns were interpreted as indicating separate progenitors.
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RESULTS |
Striatal progenitor cells were infected by injections of the AP
retroviral library into the lateral ventricles of fetal rats on E14,
E17, E19. When injected animals were analyzed at postnatal day 14 (P14), mature neuronal and glial phenotypes were detected in the
striatum as well as in adjacent forebrain regions such as amygdala,
cerebral cortex, and olfactory bulb. The AP retroviral library produced
efficient AP expression and robust staining of striatal cell processes.
As in previous studies of cortical (Reid et al., 1995 , 1997 ) and
olfactory bulb development (Reid et al., 1999 ), AP expression and
staining allowed for reliable identification of >95% of labeled striatal cells as neuronal or glial using standard morphologic criteria. The AP protein accumulates over time in the membranes of
newly born neurons (Halliday and Cepko, 1992 ) and by P14, the vast
majority show heavy labeling. Still, striatal neurons with divergent
neurochemical phenotypes often display comparable morphological characteristics. As a result, specific neuronal cell types could not be
reliably assigned on the basis of morphology alone.
AP-labeled cells show normal morphologies
The appearance of many AP-expressing neurons was, nevertheless,
similar to those seen in postmortem studies of fixed tissue. Cells
resembling medium spiny neurons had small cell bodies (10-20 µm in
diameter) and three to five smooth dendritic trunks that branched into
spiny secondary and higher order dendrites (Fig. 1A) (Kemp and Powell
1971 ; DiFiglia et al., 1976 ; Dimova et al., 1980 ; Wilson and Groves
1980 ; Chang et al., 1982 ). Their dendrites branch in all directions,
filling an approximately spherical volume, 300-500 µm in diameter
(Wilson et al., 1990 ). Other labeled neurons (Fig.
1B), had an appearance similar to cholinergic aspiny
neurons: large spherical, oval, or elongated cell bodies (~20-35
µm in diameter), thick, smooth, or sparsely spined primary dendrites, and thin dendrites that branch to form widely distributed second and
higher order processes. Often bifurcating at long distances from the
cell body (Wilson et al., 1990 ; Kawaguchi 1992 , 1993 ), the dendrites of
aspiny neurons typically occupy a space whose width is 500 µm in the
dorsoventral and mediolateral axes and 750-1000 µm in the
rostrocaudal plane (Bolam et al., 1984 ; Phelps et al., 1985 ; Graybiel
et al., 1986 ; Wilson et al., 1990 ; Kawaguchi, 1992 , 1993 ).
AP-expressing interneurons with extensively ramified dendrites
resembling the parvalbumin-immunopositive neurons were also seen in
this study (Fig. 1C). Their dendrites are smooth proximally
and become varicose distally (Kemp and Powell, 1971 ; DiFiglia et al.,
1976 ; Dimova et al., 1980 ; Chang et al., 1982 ; Cowan et al., 1990 ; Kita
et al., 1990 ; Lapper et al., 1992 ). Retrovirally labeled interneurons
with this appearance were typically observed in dorsolateral striatum,
consistent with their most common location in immunohistochemical
studies (Kita et al., 1990 ).

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Figure 1.
Retrovirally encoded AP labels a variety of normal
neuronal morphologies in the mature striatum. A-C show
three E14-labeled neurons with divergent cell morphologies. Neurons
depicted in the insets were filled with biocytin after
chemical and physiological characterization. Retrovirally encoded AP
allowed for the demonstration of morphological features consistent with these known cell classes.
Insets depict a medium spiny neuron
(A), a giant cholinergic neuron
(B), and a parvalbumin-positive neuron
(C). The AP reaction product does not appear to
alter neuronal differentiation or striatal development.
Insets are used with permission (Bennett and Wilson,
1998 ). Scale bars, 100 µm; insets, 50 µm.
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The AP retroviral library also labeled large numbers of striatal
subventricular zone cells. Many of these cells demonstrated spindle-shaped cell bodies with thick leading processes and thin trailing processes. As such, they were indistinguishable from migratory
postmitotic cells destined for the olfactory bulb (Alvarez-Buylla, 1990 ; Luskin, 1993 ; Lois et al., 1996 ; Doetsch et al., 1997 ; Reid et
al., 1999 ; Kornack and Rakic, 2001 ). The variety of recognizable striatal cell types labeled in this study suggests that retroviral labeling did not drastically alter normal cellular differentiation or
affect progenitor cell behavior. AP-labeled cortical neurons could
likewise often be classified according to standard morphological criteria (Peters and Jones, 1984 ) (see Materials and Methods).
Spatial analysis of retrovirally labeled cells
Although clonal analysis with PCR provides more
definitive information about clonal relationships, the distribution of
retrovirally labeled neurons gives general information about whether
labeled cells cluster and has been used in the past to infer clonal
relationships among striatal cells (Halliday and Cepko 1992 ; Krushel et
al., 1993 ).
In this study, glial cells always formed multicell clusters. Astrocyte
clusters varied in size from two cells to several hundred cells. The
largest of these glial clusters spread over multiple sections and into
adjacent forebrain regions in an unpredictable manner. Labeled
astrocytes had short, overlapping cell processes that usually obscured
their cell bodies. As a result, precise determination of cell number
was not possible. Oligodendrocyte clusters were much less commonly
labeled than astrocytes, usually contained many fewer cells, and were
almost always restricted to white matter tracts. The relative paucity
of oligodendrocytes probably reflects the fact that many of these cells
are born after P14 (Parnavelas, 1999 ).
AP-labeled striatal neurons also showed a strong tendency to cluster.
More than 87% of striatal neurons labeled at E14 were members of
geographically discrete cell clusters defined by the location of these
cells within 500 µm (Table 1).
Consistent with previous studies (Krushel et al., 1993 ), these clusters
ranged in size from two to four neurons (average, 2.14) (Table 1). Only 25% of striatal neurons labeled at later stages of development formed
similar appearing clusters (Table 2).
After E14 injections, neuronal cell clusters usually contained two or
three morphologically similar cells located at a similar distance from
the lateral ventricle (Fig.
2A). Most often, these clustered cells were found occupying virtually identical positions on
two adjacent sections separated by 200 µm along the A-P axis. Analogous clusters in the cortex have been termed horizontal clusters (Mione et al., 1997 ). In addition to horizontal cell clusters and
isolated single neurons, we observed radial clusters, oriented perpendicular to the ventricle and to the A-P axis, that were composed
of neurons at various distances from the ventricle.

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Figure 2.
Horizontal clusters labeled at E14.
A shows a cluster of AP-labeled neurons (white
triangles) in the lateral caudate-putamen adjacent to the
corticostriatal border. The neurons within this cell cluster are
notable for their shared morphological features and the similar
orientation of their mutually overlapping cell processes.
B and C depict analogous clusters from
cerebral cortex. B contains two layer II/III neurons
(white triangles) that possess features consistent with
multipolar neurons. C contains contrasting nonpyramidal
cell types: a stellate-appearing layer IV neuron and a layer III
bipolar neuron. Photomicrographs are oriented such that the pia is at
the top. Scale bar, 100 µm.
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Horizontal clusters
Horizontal clusters occurred throughout the striatum without any
obvious rostrocaudal or mediolateral bias (Table 1). Horizontal clusters represented 77% of clusters labeled at E14 and were almost always (94%) comprised of two neurons at similar distance from the
lateral ventricle (average, 2.06 ± 0.24). Horizontal clusters occasionally contained three labeled neurons (6%), consistent with
earlier analyses of E14-labeled striatal neurons (Krushel et al.,
1993 ). In this study, neurons in horizontal clusters often occupied
virtually identical positions in two adjacent sections (76%) or were
located on the same section (9%) within 300 µm (Fig. 2A). Fifteen percent of horizontal clusters spanned
more than two adjacent sections. Clusters spanning three sections
always involved one neuron per section on three consecutive sections. Although less common, horizontal clusters labeled by E19 injection invariably contained two similar appearing neurons and were otherwise indistinguishable from those labeled by E14 injections.
Radial clusters
Radially oriented clusters comprised 23% of clusters identified
in this study and were composed of cells located at progressive distances from the lateral ventricle (Table 1, Fig.
3). Radial clusters were larger than
horizontal clusters and included an average of 3.6 labeled cells
(range, two to seven cells). Although radial clusters represented only
23% of clusters, they accounted for more than one-third of labeled
striatal cells. Radial clusters were oriented along the trajectories of
antecedent radial glial processes and spanned up to 90% of the
striatal thickness. In spite of their significant radial dispersion,
radial clusters showed very little lateral displacement. In this study,
50% of radial clusters spanned <100 µm along the A-P axis. By way
of comparison, only 9% of horizontal clusters were dispersed <100 µm anteroposteriorly. Accordingly, the average A-P diameter of the
radial clusters was less than that of horizontal clusters, even though
radial clusters contained more cells. Analogous radial clusters,
composed principally of pyramidal neurons and spanning the entire
cortical plate have, likewise, been described in cerebral cortex
(Kornack and Rakic, 1995 ; Soriano et al., 1995 ; Mione et al.,
1997 ; Tan et al., 1998 , Ware et al., 1999 ) (Fig.
4).

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Figure 3.
A radial cluster in the P14 striatum.
Low-power photographs of two adjacent sections show radially clustered
cells in the caudate-putamen (CPu) in relation to the
lateral ventricle (LV), corpus callosum
(CC), and cerebral cortex (CTX).
Radial clusters, in contrast to horizontal clusters, frequently
involved divergent cell types. White arrows indicate
radial glia cell bodies and their processes. A mature, heavily stained
neuron (white asterisk) is located relatively close to
the lateral ventricle and the cell bodies of the radial glia cells
(A, B). High-power photographs reveal immature cells in
close association with one radial glial cell process (C, black
arrows) and a neuron that appears to be in contact with the
another glial process (D). Scale bar:
A, B, 500 µm; C,
D, 200 µm.
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Figure 4.
Radial cluster in E14-labeled cerebral cortex.
A depicts the relative positions of 15 AP-labeled
neurons as black dots spanning cortical layers II-VI.
Other than a cluster of glia in the hippocampus, these were the only
labeled cells in the hemisphere. Neurons comprising the radial cluster
were dispersed over 800 µm in the A-P axis (sections 71 to section
79), but for clarity are shown together superimposed on a low-power
camera lucida drawing of section 75. The radial appearance of this cell
cluster is reminiscent of the "stripes" seen in chimera studies.
B shows these same dots, numbered 1-15, at higher
magnification. C features camera lucida drawings of 11 neurons according to their numbering in B. The majority
of these cells show morphological features consistent with a
layer-appropriate, pyramidal neuron phenotype. DNA tags were
successfully amplified from seven neurons in the radial cluster.
Six belonged to a single clone, whereas one neuron in the cluster
(4) contained a different tag.
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Radial clusters included multiple cell types and
neuronal morphologies
In this study, radial glia comprised <10% of AP-labeled cells.
Over the course of development, radial glial cells are known to
differentiate into astrocytes. Nevertheless, 40% of radial clusters
included cells whose phenotypes were consistent with a radial glial
identity. As many as three radial glia cells appeared in a single
radial cluster. These cells showed a cell body in the proliferative
zone, often, a short apical process contacting the ventricular surface,
and a fine, radial process extending toward the pial surface (Smart and
Sturrock, 1979 ). Other AP-labeled cells forming radial clusters
included mature neurons, immature neurons, and migratory cells that
were found in close association with, or even contacting, labeled
radial glial processes (Fig. 3). This close association was consistent
with the hypothesis that some AP-labeled cells migrate from the
striatal ventricular zone along the processes of clonally related
radial glia (Noctor et al., 2001 ). The presence of immature neurons and
migrating cells in these radial clusters suggests that radial cluster
progenitors are mitotic shortly before analysis at P14.
In contrast to horizontal clusters, cells in radial clusters frequently
showed variable levels of AP expression: typically higher in cells near
the ventricle and lower in cells far away. This might reflect a general
gradient in birth dates, because older cells accumulate higher levels
of AP.
Clonal analysis by PCR
To determine clonal relationships among AP-labeled cells, we
performed PCR amplification of retrovirally encoded DNA tags. Because
PCR analysis is <100% successful, clone size, clonal dispersion, and
clonal diversity are generally underestimated. Given the complexity of
the AP retroviral library (Reid et al., 1995 ), the likelihood of two
progenitors being coincidentally infected with the same tag is <5%
for experiments with fewer than four clones and <40% for experiments
with fewer than eight clones (Walsh and Cepko, 1992 ).
Overall, PCR success rates were significantly lower in striatal neurons
as compared with cortical neurons. This discrepancy was thought to be
attributable to the heavier AP expression and staining noted in
striatal neurons whose dendritic processes frequently overlap their
cell bodies. Experiments with PCR success rates <40% were excluded
from further analysis. In experiment 6, however, PCR efficiency in
striatal neurons was equal to that of cortical neurons (42%) (Table
3). As a result, this experiment offered novel insights into striatal development. PCR was also successful in
five additional hemispheres (experiments 7-12) containing labeled cortical interneurons.
Multicell clones
PCR-defined clones varied widely in size and composition.
Multicell clones contained as few as one neuron and as many as 10 neurons. The majority of PCR-positive striatal neurons labeled at E14
were members of multicell clones. These clones consisted of 2-10
neurons for an average of four neurons per multicell clone. The
size of E14-labeled clones was therefore similar to the size of clones
labeled by much earlier injections at E9.5 (McCarthy et al., 2001 ).
After E14 injection, 4/5 (80%) of multicell clones
represented in the striatum were widely dispersed. The least dispersed clone, clone 5, was dispersed 6.3 mm along the A-P axis. Clones 1 and 3, the most widely dispersed clones
(Figs. 5, 6), were dispersed 9.7 and 8.1 mm rostrocaudally. On average, multicell clones dispersed 55% of the
rostrocaudal dimension of the P14 forebrain. In addition, all spread
beyond the borders of the striatum into the cerebral cortex. In clones
1, 2, 3, and 5, the distance between the nearest clonally related
striatal and cortical cells accounted for 55, 100, 91, and 83% of the
A-P dispersion displayed in these clones, respectively. Striatocortical
dispersion, therefore, accounted for most of the rostrocaudal
spread.

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Figure 5.
Schematic representation of clone 3. A-D depict tracings of representative sections from the
P14 rat brain. The yellow dots indicate the relative
positions of neurons in clone 3 as they were observed to disperse
within the telencephalon of experiment 6. Clone 3 includes three
ventral striatal neurons at 7600, 8000, and 8300 µm, and a cortical
neuron in parasubicular cortex at 15,700. High-power photomicrographs
depicting these neurons are oriented according to their appearance in
coronal sections. The total A-P dispersion observed in clone 3 was 8.1 mm. Scale bar, 2 mm.
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Figure 6.
Schematic representation of clone 1 (Table 3).
Clone 1 included 7 striatal neurons: one at 7300 µm
(A), three neurons at 7500 µm
(B), one at 8400 µm (C),
and two neurons at 8900 µm (D). A PCR-negative
neuron is represented by the green dot in
A. The blue dot represents a striatal
neuron shown by PCR to be part of a separate striatal clone. Clone 1 also included a layer VI cortical neuron and a superficial perirhinal
neuron at 14,200 (E). The most caudal cell in
clone 1 was a deep entorhinal neuron at 17,000 (F). Thus, the total A-P dispersion observed in
clone 1 was 9.7 mm. Scale bar, 2 mm.
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Multicell clones also showed significant dispersion within the confines
of the striatum and ventral telencephalon. Clones 1 and 3 were
dispersed 1.6 mm and 0.7 mm within the striatum anteroposteriorly or
>25 and 11% of the rostrocaudal dimension of the adult striatum, respectively. These clones also showed significant mediolateral dispersion. Clone 1 spanned 1.5 mm in the mediolateral plane, whereas
clone 3 spread 1.1 mm mediolaterally.
Widespread striatal clones included cortical interneurons
Combined analysis of striatal and cortical neurons suggested that
11 of 12 (>90%) of PCR-positive striatal neurons were members of
clones that also included cortical interneurons. Thus, striatal clones
identified by PCR in this study were recognized as part of larger mixed
striatal neuron-cortical neuron clones. It was apparent, therefore,
that a high proportion of striatal progenitors labeled at E14 also
gives rise to cortical neurons. In fact, PCR-positive striatal neurons
were more likely to be related to cortical interneurons than to other
striatal neurons (92 vs 83%). Furthermore, 5 of 15 (33%) of cortical
interneurons represented in experiment 6 were related to striatal cells.
The largest striatal clone, clone 1, contained two PCR-positive
cortical interneurons in the entorhinal cortex at 14,200 and 17,000 µm. Another clonally related neuron was located in neocortex at
14,200 µm. Clone 1 also contained seven striatal neurons: four neurons between 7300 and 7500 µm, a single striatal neuron at 8400 µm, and two neurons at 8900 µm (Fig. 6). Clone 2 included a bipolar
interneuron at 14,400 and a single striatal neuron. Clone 3 contained a
cortical neuron in parasubicular cortex at 15,700 µm. This cell
represented one PCR-positive neuron from a tight cluster of similar
appearing cells. Clone 5 contained a multipolar neuron at 6800, a
neuron in the amygdala, and a cluster of astrocytes in the striatum.
Within mixed striatal-cortical clones, cortical neurons were always
located far posterior to labeled striatal neurons, and with the
exception of clone 5, posterior to all AP-labeled striatal cells. The
relative location of clonally related striatal and cortical neurons
implies the existence of caudally dispersing intermediate progenitors.
The predominantly caudal migration suggested by this study is in
contrast to the lateral migration emphasized by slice culture
experiments (Anderson et al., 1997b ; Lavdas et al., 1999 ).
In summary, 4 of 10 (40%) multicell cortical clones in experiment 6 also contained striatal cells and provided direct evidence of common
striatal/cortical progenitors on embryonic day 14. It is notable that
all but one of the cortical neurons that were related to striatal
neurons were identified as interneurons.
Composition of interneuron clones
The unexpected and frequent clonal relationship between striatal
neurons and cortical interneurons prompted us to extend our analysis to
all cortical neurons. We performed clonal analysis among AP-labeled
cortical cells in five additional hemispheres (experiments 7-12) and
identified a total of 25 multicell clones that contained at least one
cortical interneuron (Table 3). Among multicell clones, a surprisingly
high percentage (44%) of interneuron-containing clones also included
pyramidal neurons (Table 4). Multicell
clones restricted to interneurons were less common and accounted for only 24% of interneuron clones. A comparable proportion of multicell, interneuron-containing clones included labeled astrocytes. The varied
composition of these clones highlights the wide variety of clonal
patterns involving cortical interneurons. One clone (clone 10) included
a cluster of astrocytes located 200 µm from a single cortical
interneuron. Another clone (clone 33) (Fig. 7) contained multiple pyramidal neurons,
multiple interneurons, and an astrocyte cluster in the hippocampus. A
third clone (clone 36) included a neuron in the accessory olfactory
bulb, a large cluster of astrocytes in the neocortex, and a neuron in
the deep layers of rhinal cortex.

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Figure 7.
Mixed morphology clone: the numbered,
yellow dots in A-D illustrate the positions of
neurons according to their location in the P14 rat brain (scale bar, 3 mm). Numbers associated with the dots
correspond to high-power photomicrographs of the six clonally related
neurons shown below. One layer V neuron whose position is indicated in
C is not illustrated. With the exception of the neuron
depicted in D (6), corresponding
photomicrographs are oriented such that the pia is at the top. The
photograph of neuron 6 is oriented as it appeared in the coronal
section. Three of the PCR-positive neurons in this clone demonstrated
features consistent with pyramidal neurons (2, 3, and 5) whereas the
remaining clone members (1, 4, and 6) did not. Camera lucida
drawings demonstrated that the layer II neuron depicted in
D (4) possessed multiple ascending
and descending dendrites emanating from the superior and inferior
margins of the cell body, respectively. The neuron illustrated in panel
6 displayed dendrites radiating in all directions consistent with a
multipolar neuron in lateral entorhinal cortex. This large clone also
contained a cluster of hippocampal glial cells (not depicted). Scale
bars, 100 µm.
|
|
Interneuron-containing clones varied in size, so we also calculated the
percentage of individual cortical interneurons related to various other
cell types. Predictably, 76% of cortical interneurons were related to
other cortical interneurons, however the vast majority were also
related to other cell types: 45% were clonally related to pyramidal
neurons, 19% were related to glia, and 12% were related to striatal
cells. Only 29% of cortical interneurons were related only to other
cortical interneurons.
Interneuron clones showed contrasting patterns of dispersion
Cortical clones containing interneurons frequently showed
widespread dispersion. In this experiment 88% of
interneuron-containing clones were dispersed >1 mm rostrocaudally and
tangentially. The pattern of widespread dispersion in
interneuron-containing clones did, however, vary significantly
with clonal composition (p < 0.001). In this
study, 19 clones were identified as containing exclusively pyramids,
exclusively interneurons, or both pyramidal neurons and interneurons.
Clones containing strictly pyramidal neurons always formed clusters
including a large radial cluster. Clones containing both cell types
showed comparable dispersion tangentially and rostrocaudally, and were
always dispersed at least 1 mm tangentially. Exclusive interneuron
clones, on the other hand, frequently formed smaller clusters.
Otherwise they showed even greater A-P dispersion than tangential
dispersion (Fig. 8).

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Figure 8.
Spatial representation of interneuron-containing
clones in the cerebral cortex (Table 3). A-P dispersion is plotted
along the y-axis, whereas tangential dispersion
(dispersion in the mediolateral and superioinferior plane) is shown
on the x-axis. Each colored dot
represents a cortical clone in which cell morphologies allowed
classification as an exclusively interneuron (blue
dots), mixed pyramidal-interneuron (yellow
dots), exclusively pyramidal (red dots), or
striatal-cortical clone (green dot). Clones
containing both interneurons and pyramidal neurons tended to be
dispersed equally in both dimensions, whereas interneuron-only clones
were clustered or else dispersed rostrocaudally more than tangentially.
The distribution of clones containing both interneurons and pyramidal
neurons was statistically distinct from that of exclusive interneuron
clones (p 0.001). Linear regression analysis indicates
that the line best fitting the distribution of interneuron clones
(blue dots) is described by the quadratic equation:
A-P = 2.22T 0.5, whereas the line best
fitting the mixed clones (yellow dots) was
described by the equation: A-P = 0.823T + 0.034.
|
|
Within mixed pyramidal-interneuron clones, pyramidal neurons were
sometimes clustered, but more often than not, pyramidal cells dispersed
in a manner indistinguishable from interneurons. There were also no
obvious rules governing the spatial relationship between clonally
related pyramidal neurons and interneurons. Mixed pyramidal-interneuron clones and exclusive interneuron clones, therefore appeared to represent distinct patterns of neuron generation in the cerebral cortex. We concluded that cortical interneurons showed
multiple modes of generation: mixed pyramidal and interneuron clones,
mixed striatal-interneuron clones, and exclusive interneuron clones.
 |
DISCUSSION |
The present study provides new information about clonal
organization in the striatum. Our data confirm the tendency of
E14-labeled neurons to form uniform cell clusters (Krushel et al.,
1993 ) and extended these results by demonstrating larger, widespread
striatal clones that incorporate more than one cluster. Some horizontal cell clusters were subclones of widely dispersing clones in striatum and cerebral cortex. Although the existence of mixed striatal-cortical clones has been suggested indirectly (Tan et al., 1998 ; Marin et al.,
2001 ), this report demonstrates directly that single progenitor cells
can give rise to striatal and cortical neurons. Previously we reported
rare clones dispersing between striatum and cortex (Walsh and Cepko,
1993 ; Reid et al., 1995 ), however these clones could not be related to
overall patterns of striatal development. It is evident from this study
that mammalian forebrain contains progenitors that contribute not only
to widely disparate portions of striatum, but to cortex, and likely
other subcortical regions like amygdala and preoptic area.
Symmetrical and asymmetrical divisions
Cluster analysis of nine experiments labeled between E14 and E19
showed a strong preponderance of horizontal clusters overall (80%). In
horizontal clusters, labeled cells occupied very similar positions,
usually in adjacent sections (76%) and never separated by >300 µm.
In fact, 94% of horizontal clusters were two-cell clusters in which
neurons showed similar morphology, similar levels of AP expression, and
equal distance from the lateral ventricle (Table 1, Fig.
2A).
Analogous horizontal cell clusters in cerebral cortex contain cells
located at similar distances from the ventricle, occupy either one or
two adjacent layers, and typically show similar, layer-appropriate
morphologies (Fig. 2B,C). In contrast to radial clusters, which are thought to be derived from cell divisions over a
protracted period of neurogenesis, horizontal clusters have generally
been interpreted as the progeny of late, symmetrically dividing
progenitors (Kornack and Rakic, 1995 ; Mione et al., 1997 ). It is likely
that horizontal clusters in rat striatum also represent progeny of late
symmetrical divisions.
Radial clusters were observed in caudate-putamen as well as nucleus
accumbens and involved a significant proportion of labeled cells
(34%). Although radial clusters accounted for <25% of the clusters
recognized in this study, they typically contained more cells (Tables
1, 2). They were also less dispersed rostrocaudally than horizontal
clusters and, therefore, contained a higher density of cells in the A-P
dimension (Table 1).
Embryonic analysis within days of retroviral injection captured the
beginnings of radially oriented clusters within the striatal proliferative zones (Halliday and Cepko, 1992 ; Marin et al., 2000 ). However, radial clusters were not observed to span the mature striatum
when cellular migration and differentiation were complete (Krushel et
al., 1993 ; Tan et al., 1998 ). The current study suggests that radial
clusters represent an important element of striatal development and an
enduring feature of the mature striatum.
Radial clusters have also been described in cerebral cortex (Tan and
Breen, 1993 ; Tan et al., 1995 ) where they span multiple cell layers and
are thought to form by migration of clonally related progeny along one
or a small number of similarly situated radial glia cells. Composed
predominantly of pyramidal neurons (Mione et al., 1997 ; Tan et al.,
1998 ), the largest radial clusters so far observed contain hundreds of
neurons (Tan et al., 1998 ). Recent analysis using PCR has demonstrated
that similarly large clusters are in fact polyclonal (McCarthy et al.,
2001 ).
We observed radial clusters in the striatum only when progenitors were
labeled at relatively early stages of development so that the progeny
of multiple divisions could be surveyed together as a whole. In this
study, radial clusters appeared in four of five experiments after E14
injection, but were never observed in brains injected after E14 (Table
2). The same requirement for early labeling has been demonstrated in
ferret cortex (Ware et al., 1999 ). It should be noted that radially
oriented clusters have also been reported in optic tectum (Gray et al.,
1988 ; Gray and Sanes, 1991 ), retina (Turner and Cepko, 1987 ; Holt et
al., 1988 ; Williams and Goldowitz, 1992 ), and spinal cord (Leber
et al., 1990 ) and may represent an invariant feature of the
developing nervous system.
Radial glia support clonal units in developing striatum
Although most radial glial cells are thought to differentiate into
astrocytes in the mature brain (Culican et al., 1990 ), 40% of radial
clusters in the striatum contained radial glia in addition to mature
neurons and undifferentiated, migratory cells. These clusters often
extended to the corticostriatal border (>2 mm), or to ventral
pallidum. In addition, some mature and immature cells appeared to
maintain close proximity to labeled radial glial cell processes even at
long distances (>1 mm) from the ventricle.
Although generally thought to represent a distinct cell population,
radial glia cells have been increasingly implicated as neuronal
progenitors (Chanas-Sacre et al., 2000 ; Malatesta et al., 2000 ).
Time-lapse microscopy has lent direct support to the view that cortical
radial glia divide to produce neurons (Noctor et al., 2001 ). In this
study, we demonstrated that some radial glia cells and neurons in the
developing striatum derive from common progenitors (Fig. 3). It should
be noted that the appearance of some clusters was compatible with a
model involving asymmetrically dividing radial glial cells that give
rise to a neuron and another radial glia cell.
Comparison with other brain regions
Analysis of cell lineage in developing striatum revealed patterns
of migration and clonal organization that were evocative of cerebral
cortex. Radial clusters were oriented parallel to the
trajectories of radial glia in the developing brain (Mione et al.,
1997 ), whereas smaller horizontal clusters were demonstrated to be part
of larger widespread clones (Reid at al, 1995 ). The progenitors of
widely dispersing striatal clones were clearly multipotential,
involving neurons in cerebral cortex, as well as cells in striatum
(Table 3).
The mechanisms underlying neuronal migration to cerebral cortex and
olfactory bulb from the striatal proliferative zone appear to involve
separate progenitors. Frequent dispersion observed between striatum and
cerebral cortex in this study stands in stark contrast to a lack of
dispersion between cortex and bulb (Reid et al., 1999 ). These data are
consistent with the notion that the ganglionic eminence contains
separate pools of interneurons destined for distinct brain regions
(Anderson et al., 1997a ,b 1999; Sussel et al., 1999 ; Wichterle et al.,
2001 ).
Genetic control of striatal neurogenesis
Multiple genes have been implicated in controlling the migration
of MGE-derived interneurons. Slit-1, for instance, is expressed in the
ventricular zone (VZ) of LGE and is repellent for striatal interneurons and olfactory bulb neurons (Itoh et al., 1998 ; Mason et
al., 2001 ). The effect of Slit-1 on both GABAergic and non-GABAergic neurons is blocked in explants by the addition of a nonfunctional Slit-1 receptor (Zhu et al., 1999 ). A similar repulsive activity has
been demonstrated by semaphorins 3A and 3F, however their repellent
effect is selective for GABAergic interneurons destined for cerebral
cortex (Marin et al., 2001 ). Netrin-1 is another diffusible factor
expressed in the striatal VZ. The repulsive activity of Netrin-1 on
migrating SVZ neurons in the striatum is blocked in the presence of
antibodies against Deleted-in-colorectal cancer, its putative
receptor (Hamasaki et al., 2001 ). In the context of the present study,
it appears that individual progeny of striatal progenitors labeled at
E14 may show contrasting sensitivities to factors such as slit-1,
netrin-1 or the semaphorins. Therefore, expression of receptors for
diffusible signals may be environmentally regulated or may instead
reflect inherited differences assigned through asymmetric cell divisions.
Multiple modes of cortical interneuron generation
A consensus view has emerged that cortical interneurons and
pyramidal neurons have distinct origins (Tan et al., 1998 ; Anderson et
al., 1999 ; Parnavelas, 2000 ). When neuronal migration from basal
telencephalon to cerebral cortex is blocked, there is a dramatic
decrease in GABA reactivity in the cerebral cortex (Anderson et al.,
1997b ). A strict separation of pyramidal and interneuron progenitors
is, however, difficult to resolve with chimera and many retroviral
labeling experiments. Immunohistochemical examination of E16-labeled
cortical clones in rat cerebral cortex, for instance, demonstrated
clusters containing both glutamate-positive and GABA-positive neurons
(Lavdas et al., 1996 ). This result leaves open the possibility that
some progenitors produce both GABAergic and glutamatergic neurons.
On the basis of their representation in chimera or retroviral
experiments, it has been suggested that pyramidal neurons arise in the
cortical VZ and form radial clusters, whereas GABAergic neurons
generated in MGE become scattered in the cerebral cortex. It should be
noted, however, that one-third of scattered neurons in the cortices of
unbalanced mouse chimeras were glutamate-positive and presumably
pyramidal neurons (Tan et al., 1998 ). Conversely, it seems likely that
some proportion of cortical interneurons derives from progenitors
restricted to a cortical fate because labeled GABAergic cells were seen
in the cortices of chimeric animals even when labeling was not observed
in underlying striatum (Tan et al., 1998 ). Because it is not yet
possible to follow individual cells from their point of origin to their
final state of differentiation, the possibility remains that some
fraction of interneurons originates in the cortical VZ.
 |
FOOTNOTES |
Received Oct. 29, 2001; revised Feb. 12, 2002; accepted Feb. 13, 2002.
C.B.R. was supported by grants from the Uniformed Services University,
Massachusetts Institute of Technology, and the National Medical
Association. C.A.W. was supported by National Institute of Neurological
Disorders and Stroke Grant 1RO1 NS32457, the National Alliance for
Research in Schizophrenia and Depression, and the National Alliance for
Autism Research. We thank Drs. Brian Cox, Tom Cote, Jeff Harmon, and
Regina Armstrong for their support and helpful comments and Dr. Jozsef
Czege of the Biomedical Instrumentation Center at the Uniformed
Services University of the Health Sciences (USU) for invaluable imaging
and image processing. We also thank Dr. Ivan Liang and Dr. Wenjiang Yu
for their important technical and scientific contributions. Finally, we
thank Cara Olsen of USUHS Biostatistics Consulting Center for
statistical consultation. The opinions and assertions contained herein
are the private opinions of the authors and are not to be construed as
official or reflecting the views of the Uniformed Services University
of the Health Sciences or the United States Department of Defense.
Correspondence should be addressed to Chris Reid, Department of
Pharmacology and Neuroscience Program, F. Edward Hebert School of
Medicine, Uniformed Services University, Jones Bridge Road, Bethesda,
MD 20814. E-mail: creid{at}usuhs.mil.
 |
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