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The Journal of Neuroscience, August 15, 2002, 22(16):7080-7087
Identification of Domains of Netrin UNC-6 that Mediate Attractive
and Repulsive Guidance and Responses from Cells and Growth Cones
Yoo-shick
Lim and
William G.
Wadsworth
Department of Pathology, Robert Wood Johnson Medical School,
Piscataway, New Jersey 08854-5635
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ABSTRACT |
Netrin UNC-6 is a protein secreted from ventral cells that guides
cell and growth cone migrations in Caenorhabditis
elegans. Previously it was shown that UNC-6 domain V-2
regulates dorsal guidance activity and domain C regulates an activity
that prevents the branching of axons when they respond to the
N-terminal domains. Because these results indicate that the biological
activities of UNC-6 are mediated through specific domains, we
systematically examined each UNC-6 domain for guidance activities.
Transgenic animals expressing UNC-6 derivatives with domain deletions
and mutants with selective unc-6 loss-of-function
mutations were analyzed. The results indicate that the VI, V-2, and V-3
domains are primarily required for dorsal migrations and the VI and V-3
domains are required for ventral migrations. These domains are likely
important for responses mediated by the UNC-5 and UNC-40 receptors,
respectively. Deletion of V-3 and a V-3 point mutation selectively
affect either cell or growth cone migrations, indicating that each
migration requires unique interactions with UNC-6. Deletion of domain
VI or of a conserved eight amino acid motif within VI causes loss of
all UNC-6 guidance activities, and mutations within domain VI
selectively affect different guidance activities, suggesting that
domain VI regulates each response to UNC-6. We propose that individual
UNC-6 domains mediate different signals, which act in parallel to
regulate the morphological changes necessary for guidance.
Key words:
netrin; UNC-6; C. elegans; axon guidance; cell
migration; structure-function
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INTRODUCTION |
UNC-6/netrins are a family of
secreted extracellular proteins that can either attract or repel
migrating cells and axons. The attractive or repulsive responses of
cells and axons to netrin are dependent on the molecular interactions
between netrin and cell surface receptors. In Caenorhabditis
elegans, migrating cells and axons express unc-5 and
unc-40, genes that are required together with
unc-6 to direct circumferential migrations (Hedgecock et al., 1990 ; Leung-Hagesteijn et al., 1992 ; Chan et al., 1996 ). unc-5 directs dorsal migrations, whereas unc-40
plays a role in both dorsal and ventral migrations. UNC-40 is a member
of the Deleted in Colorectal Cancer family of transmembrane
receptor proteins, which are implicated as netrin receptors (Chan et
al., 1996 ; Keino-Masu et al., 1996 ; Kolodziej et al., 1996 ; Fazeli et
al., 1997 ). Members of this family have four immunoglobulin and six
fibronectin type III extracellular domains and a cytoplasmic domain
with several shared domains. Members of the UNC-5 family of
transmembrane receptors are also implicated as netrin receptors (Leung-Hagesteijn et al., 1992 ; Ackerman et al., 1997 ; Leonardo et al.,
1997 ). They share a common structure of two immunoglobulin and two
thrombospondin type 1 extracellular domains and a cytoplasmic domain
with several motifs including ZU-5 and Death Domain.
As with most extracellular matrix and cell adhesion molecules, the
netrins comprise multiple modules that are found in functionally divergent proteins. UNC-6 was the founding member of the netrin family,
and the domains were designated VI, V-1, V-2, V-3, and C (Ishii et al.,
1992 ). The UNC-6 VI and V modules are homologous to the N termini of
laminin subunits, which are among the most conserved extracellular
matrix proteins of basement membranes. UNC-6 C is also a
phylogenetically conserved protein module; it has been found in the
complement C345 protein family, frizzled related proteins, type I
C-proteinase enhancer proteins (PCOLCEs), and tissue inhibitors of
metalloproteinases (TIMPs) (Ishii et al., 1992 ; Leyns et al., 1997 ;
Banyai and Patthy, 1999 ).
Specific UNC-6 domains appear to regulate different UNC-6 guidance
activities (Wadsworth et al., 1996 ). The analyses of several selective
loss-of-function alleles that delete the V-2 coding region indicated
that the V-2 module is required for dorsal UNC-6 guidance activity
(Wadsworth et al., 1996 ). Moreover, transgenic rescue experiments
suggested that the C module is required to prevent axons from branching
when they respond to the N-terminal domains (Lim et al., 1999 ; Wang and
Wadsworth, 2002 ). There are at least four distinct responses to UNC-6
that can be separated genetically; these are repulsive and attractive
responses and the responses by cells and growth cones (Hedgecock et
al., 1990 ). For these responses, only the V-2 domain is known to play a
role, although point mutations within domain VI suggest that this
domain also mediates specific responses (Wadsworth et al., 1996 ). Here we report the results of a systematic analysis of UNC-6 domain functions. The results identify domains required for different guidance
responses in vivo, and we propose that UNC-6 domains mediate
parallel signals that together direct a guidance response.
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MATERIALS AND METHODS |
C. elegans manipulations. C. elegans cultures were maintained by standard methods (Brenner,
1974 ). Transformation was performed as described (Mello et al., 1991 ;
Mello and Fire, 1995 ) by injecting the plasmid construct with the
dominant transformation marker pRF4, which contains
rol-6(su1006) (Kramer et al., 1990 ). Strains harboring
introduced DNA as an integrated array were constructed by irradiation
(Mello and Fire, 1995 ). Assays were conducted on a sample size of 100 animals from each of at least three independent lines. Behavioral and
cellular defects of unc-5, unc-6, and unc-40 mutants were assayed according to the method of Hedgecock et al. (1990) . Basic molecular techniques for preparation of plasmid DNA,
restriction enzyme digestions, agarose gel electrophoresis of DNA,
Western blotting, and other molecular biology methods were by standard
methods. Monoclonal antibody 12CA5 (Boehringer Mannheim, Indianapolis,
IN) was used to detect UNC-6:: HA on Western blots. Transgenic
animals containing pIM#97 sequence express a hemagglutinin (HA)
epitope-tagged UNC-6 that is capable of rescuing unc-6 null
mutants (Wadsworth et al., 1996 ).
DNA constructions. The plasmid pIM#180 was constructed by
deleting the eight amino acids -like region in domain VI. To make the deletion, two fragments that introduce a HinfI
site were PCR-amplified by using pIM#97 as a template. The primer pair
for the first fragment was 5'-GTAGCACCTAGGGTG-3' and
5'-CTTGTAAAGTGCCATTGAATCTGGGAGA-3'. After the PCR, the
PCR-amplified products were digested with SalI and
HinfI. The primer sets for the second fragment were
5'-TCTCCCAGATTCAATGGCACTTTACAAGACCCCGTTTCAATTCTACTCCTCCGAATGTCG-3' and 5'-GTCAGTTGCGGTGACCCAATCC-3'. For this PCR, the same template was used, and the amplified PCR products were digested with
HinfI and SgrAI. A 906 bp fragment was excised
with SalI and SgrAI from pIM#97 and replaced by
the above SalI-HinfI and
HinfI-SgrAI fragments to generate pIM#180. The
plasmid pIM#190 was constructed by deleting the whole domain VI. To
make the deletion, two fragments that introduce an EcoRI
site were PCR-amplified with pIM#97 as a template. The first fragment
was produced by using this primer pair: 5'-CTGTGAGAGAT-CTGGGCC-3' and T7 primer. KpnI and EcoRI cut the
PCR-amplified products. The second fragment was amplified using this
primer set: 5'-TCGCTGCAAATGTAATGGTC-3' and
5'-GGTACTTGTCTTTC-TTTC-3'. EcoRI and NruI cut this
fragment. A 4820 bp fragment was excised with KpnI and NruI
from pIM#97 and replaced with above KpnI-EcoRI
and EcoRI-NruI fragment to generate pIM#190. The plasmid
pIM#206 was constructed by deleting domain V-1. To make this deletion
construct, the two fragments that introduce a SphI site were
amplified by PCR with pIM#97 as a template. For the first fragment,
5'-GAGAACAGACCTTCTGC-3' and 5'-GATCGCATGCACCACCAACTGCC-3' were used
as a set of primers. This PCR product was double digested with
SgrAI and SphI. For the second fragment,
5'-GATCGCATGCGCTTGCAACTGCA-3' and 5'-CACTACAAAAAG-GCGCCTGG-3' were
used as primers for the PCR with the same template. SphI and
NarI were used to digest this amplified DNA. An 1884 bp fragment was
excised with SgrAI and NarI from pIM#97 and replaced by the above SgrAI-SphI and SphI-NarI
fragments to generate pIM#206. The plasmid pIM#181 was constructed by
deleting domain V-2. The pIM#97 was digested with XhoI and
subjected to a Klenow reaction without dNTP. The fragments were
separated by agarose gel electrophoresis, and the largest fragment was
eluted, digested with NruI, and self ligated to generate pIM#181. The
plasmid pIM#182 was made by deleting domain V-3. PIM#97 was partially
digested with XbaI, a 12375 bp fragment was eluted from the
digestion mixture, and this fragment was self ligated to generate
pIM#182. The plasmid pIM#184 was constructed by replacing domain V-2
with domain V-3. An XbaI fragment (336 bp) containing domain
V-3 from pIM#97 was inserted into XbaI site of plasmid
SK(+). The resulting plasmid was double digested with PvuII
and XhoI, and the PvuII-XhoI fragment
was inserted into the NruI and XhoI sites of pIM#97 to
generated pIM#184. The plasmid pIM#191 was constructed to express only
UNC-6 domain C in ventral nerve cord under the glr-1 promoter. For the
first fragment the UNC-6 signal peptide and HA-tag sequences were
PCR-amplified using pIM#97 as a template and
5'-GATCGGTACCATGATCAATCAGTATTG-3' and
5'-GTCAGATATCTGAGAGATCTGGG-3' as primers. This PCR
product was double digested with KpnI and EcoRV;
the digested fragment was inserted into the KpnI and
EcoRV site of pPD49.26. For the second fragment the UNC-6
domain C sequence was PCR-amplified using pIM#145 as a template and
5'-GATCGATATCCAGAAATTCCGACC-3' and
5'-GTACGATATCATCTGTGTGACG-3' as primers. This PCR product was digested with EcoRV; the digested fragment was inserted
into the EcoRV site of the above constructs. The
BamHI and PstI fragment, which encodes glr-1
promoter sequences, from plasmid PV6 was inserted into BamHI
and PstI sites of the above constructs to generate pIM#191.
Transgenic animals. The strains used in this paper are as
follows: IM19: urIs13[IM#175 pRF4], IM39: urIs13;
unc-6(ev400), IM113: urIs62[IM#97 IM#175 pRF4];
unc-6(ev400), IM65: urIs13; unc-5(e53), IM167:
urIs13; unc-5(e53); unc-6(ev400), IM62: urIs13; unc-40(e1430), IM98: urIs13; unc-40(e1430);
unc-6(ev400), IM492: urIs247[IM#206 pRF4]; edIs20;
unc-6(ev400), IM493: urIs248[IM#206 pRF4]; edIs20;
unc-6(ev400), IM494: urIs249[IM#206 pRF4];edIs20; unc-6(ev400), IM95: urIs56[IM#181 IM#175 pRF4];
unc-6(ev400), IM96: urIs57[IM#181 IM#175 pRF4];
unc-6(ev400), edIs20[F25B3.3:: GFP pRF4],
IM513: urIs253[IM#182 pRF4]; edIs20; unc-6(ev400), IM514:
urIs254[IM#182 pRF4]; edIs20; unc-6(ev400), IM515:
urIs255[IM#182 pRF4]; edIs20; unc-6(ev400), IM522:
urIs256[IM#184 pRF4]; edIs20; unc-6(ev400), IM523:
urIs257[IM#184 pRF4]; edIs20; unc-6(ev400), IM524:
urIs258[IM#184 pRF4];edIs20; unc-6(ev400), IM531:
urIs259[IM#180 pRF4]; edIs20; unc-6(ev400), IM532:
urIs260[IM#180 pRF4]; edIs20; unc-6(ev400), IM533:
urIs261[IM#180 pRF4];edIs20; unc-6(ev400), IM540:
urIs262[IM#190 pRF4];edIs20; unc-6(ev400), IM541:
urIs26[IM#190 pRF4]; edIs20; unc-6(ev400), IM542:
urIs264[IM#190 pRF4]; edIs20; unc-6(ev400), IM545:
urIs265[IM#191 pRF4]; edIs20; unc-6(ev400), IM146:
urIs13; unc-6(e78), IM117: urIs13; unc-6(rh204),
IM548: edIs20; unc-6(ev436), IM551: edIs20;
unc-6(rh46) were used for visualization of all neurons.
IM175: rhIs4[glr-1:: GFP], IM202: rhIs4;
unc-6(ev400), IM205: rhIs4; unc-5(e53), IM485:
rhIs4; unc-5(e53); unc-6(ev400), IM206: rhIs4;
unc-40(e1430), IM484: rhIs4; unc-40(e1430); unc-6(ev400), IM486: urIs247[IM#206 pRF4];
rhIs4; unc-6(ev400), IM487: urIs248[IM#206 pRF4];
rhIs4; unc-6(ev400), IM488: urIs249[IM#206 pRF4];
rhIs4; unc-6(ev400), IM498: urIs250[IM#181
pRF4];rhIs4; unc-6(ev400), IM499: urIs251[IM#181 pRF4];
rhIs4; unc-6(ev400), IM500: urIs252[IM#181 pRF4]; rhIs4;
unc-6(ev400), IM507: urIs253[IM#182 pRF4]; rhIs4;
unc-6(ev400), IM508: urIs254[IM#182 pRF4]; rhIs4; unc-6(ev400), IM509: urIs255[IM#182 pRF4]; rhIs4;
unc-6(ev400), IM516: urIs256[IM#184 pRF4]; rhIs4;
unc-6(ev400), IM517: urIs257[IM#184 pRF4]; rhIs4;
unc-6(ev400), IM518: urIs258[IM#184 pRF4]; rhIs4; unc-6(ev400), IM525: urIs259[IM#180 pRF4]; rhIs4;
unc-6(ev400), IM526: urIs260[IM#180 pRF4]; rhIs4;
unc-6(ev400), IM527: urIs261[IM#180 pRF4]; rhIs4;
unc-6(ev400), IM534: urIs262[IM#190 pRF4]; rhIs4; unc-6(ev400), IM535: urIs26[IM#190 pRF4]; rhIs4;
unc-6(ev400), IM536: urIs264[IM#190 pRF4]; rhIs4;
unc-6(ev400), IM543: urIs265[IM#191 pRF4]; rhIs4;
unc-6(ev400), IM203: rhIs4; unc-6(e78), IM204:
rhIs4; unc-6(rh204), IM546: rhIs4; unc-6(ev436),
IM549: rhIs4; unc-6(rh46) were used for visualization of PVC
interneurons. NW1099: evIs82a[unc-129:: GFP],
IM207: evIs82a; unc-6(ev400), IM210: evIs82a;
unc-5(e53), IM261: evIs82a; unc-5(e53); unc-6(ev400),
IM211: evIs82a; unc-40(e1430), IM260: evIs82a;
unc-40(e1430); unc-6(ev400), IM489: urIs247[IM#206 pRF4];
evIs82a; unc-6(ev400), IM490: urIs248[IM#206 pRF4];
evIs82a; unc-6(ev400), IM491: urIs249[IM#206 pRF4];
evIs82a; unc-6(ev400), IM501: urIs250[IM#181 pRF4];
evIs82a; unc-6(ev400), IM502: urIs251[IM#181 pRF4];
evIs82a; unc-6(ev400), IM503: urIs252[IM#181 pRF4];
evIs82a; unc-6(ev400), IM510: urIs253[IM#182 pRF4];
evIs82a; unc-6(ev400), IM511: urIs254[IM#182 pRF4];
evIs82a; unc-6(ev400), IM512: urIs255[IM#182 pRF4];
evIs82a; unc-6(ev400), IM519: urIs256[IM#184 pRF4];
evIs82a; unc-6(ev400), IM520: urIs257[IM#184 pRF4];
evIs82a; unc-6(ev400), IM521: urIs258[IM#184 pRF4];
evIs82a; unc-6(ev400), IM528: urIs259[IM#180 pRF4];
evIs82a; unc-6(ev400), IM529: urIs260[IM#180 pRF4];
evIs82a; unc-6(ev400), IM530: urIs261[IM#180 pRF4];
evIs82a; unc-6(ev400), IM537: urIs262[IM#190 pRF4];
evIs82a; unc-6(ev400), IM538: urIs26[IM#190 pRF4];
evIs82a; unc-6(ev400), IM539: urIs264[IM#190 pRF4];
evIs82a; unc-6(ev400), IM544: urIs265[IM#191 pRF4];
evIs82a; unc-6(ev400), IM208: evIs82a; unc-6(e78),
IM209: evIs82a; unc-6(rh204), IM547: evIs82a;
unc-6(ev436), IM550: evIs82a; unc-6(rh46) were used for visualization of DA and DB motor neurons.
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RESULTS |
Mapping domains required for UNC-6 function
Derivatives of unc-6 were constructed to encode UNC-6
with specific deletions or substitutions (Fig.
1). For each construct, the microinjected
DNA was integrated into a chromosome, and three independently derived
transgenic lines were established. The proteins were designed to
include an N-terminal HA epitope tag, and the expression of each
protein was analyzed by Western blot. The derivatives were tested in
the unc-6 null background for their ability to rescue
unc-6 null guidance defects. For each migration assay, 100 animals from each line were scored.

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Figure 1.
Schematic representation of the netrin UNC-6
protein and UNC-6 derivatives used in this study. UNC-6 comprises an
N-terminal domain VI (residues 1-268) similar to the N-terminal domain
VI of laminin subunits, three cysteine-rich repeats (residues 269-437)
similar to those of domain V of laminin subunits, and a C-terminal
domain named C (residues 438-591) that is not found in laminins but is
phylogenetically conserved among other extracellular proteins. An
epitope tag comprising three tandem copies of the HA epitope was
engineered into a site immediately after the predicted signal peptide
(SP).
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The UNC-6 VI construct deletes domain VI. UNC-6/netrin domain VI was
named because of its similarity with the N-terminal domain VI of
laminin subunits (Ishii et al., 1992 ). Laminin is a large heterotrimeric extracellular matrix protein formed from three polypeptide chains ( , , and ), and in the prototypical laminin each subunit chain contains a domain VI (Timpl and Brown, 1996 ). Overall, UNC-6 domain VI is most similar to the domain VI of the laminin subunit; however, a short motif (SADFGKTW) within the UNC-6
domain VI is a hallmark of laminin subunits. Because the phylogenetic conservation of this motif in netrins and laminin subunits suggests a critical function, we specifically deleted these
amino acids to create a UNC-6 VI8 derivative.
The UNC-6/netrin V domain was named because of the similarity to the
tandem array of cysteine-rich repeats of the V-1, V-2, and V-3 motifs
of the laminin subunits (Ishii et al., 1992 ). Overall the UNC-6 V
domains are most similar to the repeats of the laminin subunit,
with the exception of V-2, which is most similar to the V-2 domain of
the laminin subunit. The V-2 repeat is the most highly conserved
repeat among the netrins. Within vertebrate netrins, the other
laminin-like domains more closely resemble either the laminin or
subunit (Koch et al., 2000 ). To study the requirement of these
domains for UNC-6 guidance, we constructed a series of derivatives that
specifically remove each domain, UNC-6 V-1, UNC-6 V-2, and
UNC-6 V-3. In addition, we constructed a derivative, UNC-6 V-1-3-3,
to test whether the V-3 repeat can functionally substitute for the V-2 repeat.
The third domain of UNC-6 is designated domain C (Ishii et al., 1992 ).
The domain was found at the C terminus and showed similarity to the C
termini of the complement C345 protein family. This module was later
identified in frizzled related proteins, type I PCOLCEs, and
TIMPs (Leyns et al., 1997 ; Banyai and Patthy, 1999 ).
Interestingly, functionally divergent members of the UNC-6/netrin
family have been described that differ mainly in the similarity between
C domains (Nakashiba et al., 2000 , 2002 ; Yin et al., 2002 ). To examine the role of UNC-6 C we constructed the derivative UNC-6 C. In addition, we investigated the effect that the expression of the C
module alone would have by constructing a UNC-6 VI-V derivative using
a glr-1 promoter to drive expression in ventral nerve cord interneurons.
Domains VI, V-2, and V-3 primarily function in dorsal cell and
axon guidance
To determine whether any of the UNC-6 derivatives are capable of
directing dorsal axon migrations, we examined the dorsal migrations of
the DA and DB motor neuron axons and of the SDQR axon when each
UNC-6 derivative was expressed in the unc-6 null background
(Fig. 2). To score the DA and DB
migrations, we genetically crossed in an
unc-129:: gfp transgene that allows these neurons to be visualized by epifluorescence microscopy (Colavita et al., 1998 ).
In the wild-type embryo, axons of the DA and DB neurons migrate
circumferentially from the ventral midline cell bodies to form the
dorsal nerve cord (Fig. 3). In
unc-6 null larvae, the axons wander and longitudinally
migrate, resulting in 98% of the axons failing to reach the dorsal
midline (Table 1). We find that all the
axons reach the dorsal cord in unc-6 V-1
animals, and only 9% failed to reach the dorsal midline in
unc-6 C animals (Table 1) (Lim et al., 1999 ). Similar
results were obtained when the SDQR axon migrations were scored. The
SDQR cell body is located along the lateral body wall, and the axon
migrates dorsally to the dorsal sublateral nerve (Fig. 2). The axon was
visualized by pan-neural expression of green fluorescent protein (GFP)
(Kim et al., 1999 ). Although 91% of the axons fail to reach the dorsal sublateral nerve in unc-6 null animals, 3% fail in
unc-6 V-1 animals and 56% fail in unc-6 C
animals (Table 1). In contrast, expression of UNC-6 VI, UNC-6 V-2,
UNC-6 V-3, or UNC-6V-1-3-3 fails to rescue dorsal axon migrations
(Tables 1, 2). These results indicate that the UNC-6 VI, V-2, and V-3 domains are required primarily for the
dorsal axon guidance activities of UNC-6.

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Figure 2.
Summary of cell and axon positions.
A, Cell bodies and axons of representative sensory and
motor neurons. The migration of the axons of DA and DB motor neurons
and of SDQR were assayed to measure the ability of unc-6
mutations and transgenes to guide dorsal axon migrations. Only DA motor
neurons are represented for simplicity. PVCL and AVM axons were assayed
to measure ventral axon migrations. B, Migrating
mesodermal cells, the distal tip cells, and the anchor cell were
assayed to measure dorsal and ventral cell migrations, respectively.
Details of the phenotypes of these cells in unc-5,
unc-6, and unc-40 mutants were reported by
Hedgecock et al. (1990) . Anterior is to the left; dorsal
is at top.
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Figure 3.
Dorsal axon migrations of DA and DB motor neurons.
A, In wild-type animals, the DA and DB cell bodies
(arrowheads) are positioned along the
ventral nerve cord, and each has an axon that migrates longitudinally
along the ventral nerve cord (vc) and an axon that
migrates circumferentially to the dorsal nerve cord
(dc). B, In some mutants, the dorsal
circumferential migration defects are relatively mild. In this
unc-40 mutant, a single axon (arrows) has
abnormally migrated at the dorsal sublateral position and fails to
reach the dorsal nerve cord. C, In unc-6
mutants, the axons rarely reach the dorsal nerve cord. In this
unc-6 mutant, most axons turn and migrate at the ventral
sublateral and lateral positions (arrows). Anterior is
to the left; dorsal is at top. Scale
bars, 25 µm.
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To measure the ability of the UNC-6 derivatives to guide dorsal cell
migrations, we scored the dorsal migration of the two hermaphrodite
distal tip cells (Hedgecock et al., 1990 ). These cells migrate across
muscle and epidermis basement membranes to form the hermaphrodite
gonad. At one point, both the anterior and posterior distal tip cells
migrate dorsally from their positions along the ventral muscle quadrant
(Fig. 2). In unc-6 null animals, 38% of the anterior and
62% of the posterior cells fail to migrate dorsally (Table 1). With
the exception of UNC-6 V-1 and UNC-6 C, all of the other UNC-6
derivatives fail to rescue these dorsal cell migrations (Tables 1, 2).
All cells migrated normally in unc-6 V-1 animals, and only
3% of the anterior and 13% of the posterior cells failed to migrate
in unc-6 C animals (Table 1) (Lim et al., 1999 ). These
results indicate that the UNC-6 VI, V-2, and V-3 domains are required
primarily for the dorsal cell guidance activities of UNC-6.
Domain VI functions primarily in ventral cell and axon guidance,
and domain V-3 functions in ventral cell guidance but not ventral axon
guidance
To investigate whether any of the UNC-6 derivatives are capable of
directing ventral axon migrations, we examined the ventral axon
migrations of the PVCL and AVM axons in the unc-6
null background (Fig. 2). The PVC neurons are in the lateral
lumbar ganglia near the tail of the animal; PVCL is in the left lumbar
ganglion and PVCR is in the right (Fig.
4). These neurons send axons ventrally along the lumbar commissures in a process that requires the
UNC-6-expressing commmissure pioneer PVQ and the
UNC-6-expressing midline PVT neuron (Durbin, 1987 ; Ren et al.,
1999 ). After entering the ventral cord, the PVC axons eventually go the
entire length of the cord. To examine the PVC neuron, we used a
glr-1:: GFP transgene that labels 11 interneurons
in the ventral nerve cord, the PVC axons being the only ones from the
lumbar ganglion (Maricq et al., 1995 ). We also examined the AVM neuron,
which is born in the first larval stage and sends an axon ventrally
from the lateral cell body during subsequent developmental stages
(Sulston and Horvitz, 1977 ). The AVM neuron is positioned alone along
the right lateral body wall, and its axon migration was scored using
pan-neural GFP expression.

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Figure 4.
Ventral axon migrations of PVC in the tail region.
A, In wild-type animals, the PVC neurons extend an axon
ventrally along the lumbar commissure to the ventral nerve cord
(vc). The left PVC neuron (PVCL) is
shown. B, In unc-6 mutants, the PVC axons
often migrate at the lateral position instead of directly entering the
ventral nerve cord. In this animal, the axon from the left PVC neuron
(PVCL) has migrated laterally, whereas the axon from the
right PVC neuron (PVCR) has correctly migrated to the
ventral nerve cord. Anterior is to the left; dorsal is
at top. Scale bars, 10 µm.
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In unc-6 null mutants, 39% of the PVCL and 27% of the AVM
axons fail to migrate ventrally (Table 1). Expression of UNC-6 VI or
UNC-6 VI8 does not rescue this phenotype, whereas expression of
UNC-6 V-1, UNC-6 V-2, UNC-6 V-3, UNC-6V-1-3-3, or UNC-6 C at least partly rescues these ventral axon migration defects (Tables 1,
3). These results are in contrast to the
dorsal axon migration results, where only UNC-6 V-1 and UNC-6 C
could rescue the unc-6 null phenotype. Thus, domain VI is
required for both dorsal and ventral axon migrations, whereas V-2 and
V-3 are required primarily for dorsal axon migrations but not for
ventral axon migrations. Domains V-1 and C are not essential for either
dorsal or ventral axon migrations.
To determine whether expression of a UNC-6 derivative affects ventral
cell migration, we examined the ability of each transgene to rescue the
egg-laying defects of unc-6 null mutants. In wild-type hermaphrodites, the anchor cell moves to the center of the ventral uterus and induces the ventral epidermal cells to become vulval precursor cells (Fig. 2) (Sternberg and Horvitz, 1986 ). In the unc-6 null hermaphrodites, the anchor cell is often
displaced laterally or dorsally, and the vulva does not develop
properly, resulting in animals that are unable to lay eggs (Hedgecock
et al., 1990 ). This occurs in 55% of the null mutants (Table 1). The
expression of UNC-6 VI, UNC-6 VI8 , or UNC-6 V-3 does not rescue the egg-laying defect; however, the expression of UNC-6 V-1 does rescue and expression of UNC-6 V-2, UNC-6 V-1-3-3, and
UNC-6 C partly rescues (34, 37, and 30% defective, respectively).
These results show that the ventral cell migration function requires VI
and V-3 and that V-2 and C influence the migration but are not
essential. Domain V-1 is not required.
Domain C is not required for guidance activity but inhibits an
axon-branching activity
UNC-6 C has guidance activity (Lim et al., 1999 ) (Table 1). In
addition, we reported previously that the expression of UNC-6 C causes ventral nerve cord motor neurons to extend additional
circumferential branches (Lim et al., 1999 ). Further studies have
indicated that the UNC-6 C domain silences ectopic branching, which is
dependent on the CaMKII and DAG signaling pathways (Wang and Wadsworth, 2002 ). We report here that the expression in the ventral nerve cord
interneurons of UNC-6 VI-V, which comprises only UNC-6 C, does not
rescue any of the motor neuron guidance defects in unc-6 null animals, nor are any other abnormalities observed (data not shown). This is consistent with the proposal that the UNC-6 C domain
acts in cis to the N-terminal domains to silence the axon (Wang and Wadsworth, 2002 ).
unc-6 transgenes encoding domain deletions cause
phenotypes similar to selective loss-of-function alleles
A caveat concerning the interpretation of the transgene results
stems from the difficulty of proving that the phenotypes are not the
result of inappropriate expression. Although Western blot analysis
indicates that a protein from each transgene is produced, whether the
precise wild-type levels and distribution of each protein are achieved,
is difficult to ascertain. Because mutations within the coding
sequence of the endogenous gene are more likely to cause phenotypes
that result from altered protein structure, we used our assays to
examine mutants with selective loss-of-function alleles. If individual
domains primarily determine a specific guidance activity, then
mutations disrupting the coding sequence of that domain might cause
some phenotypes that are similar to those caused by the expression of a
transgene encoding the protein without that domain. Thus, complementary
phenotypes would suggest that a transgene phenotype is the result of
altered protein structure rather than inappropriate expression.
We examined four different alleles of unc-6. The first was
unc-6(rh204), an allele found previously to contain a
deletion that causes the production of a protein lacking the V-2 domain (Wadsworth et al., 1996 ). Earlier studies indicated that this allele
specifically disrupts dorsal cell and axon migrations (Hedgecock et
al., 1990 ). Here we assayed the effects of this mutation by directly
scoring axons using neuronal GFP expression. This allows a direct
comparison to our transgene expression results. We find that both the
unc-6(204) mutation and the expression of the V-2 deletion
transgene cause similar phenotypes; that is, dorsal migrations are
primarily disrupted (Table 1).
The unc-6(e78) allele was noted previously as having partial
gene function (Hedgecock et al., 1990 ). To quantitate dorsal axon
migrations, we scored the DA and DB axons and found that 90% of the DA
and DB circumferential axons failed to migrate dorsally. However, for
dorsal cell migrations, 0% of the anterior and only 15% of the
posterior distal tip cells failed to migrate dorsally (Table 1). We
find that the e78 mutation introduces a tyrosine residue in
place of the conserved cysteine at position 410 within domain V-3.
These results suggest that a misfolding of the V-3 domain in
unc-6(e78) mutants does not affect dorsal cell migration functions but does affect dorsal axon migration functions. Both the
unc-6(e78) mutation and the expression of the V-3 deletion transgene cause similar phenotypes: disruption of dorsal axon migrations with less affect on ventral axon migrations. Furthermore, both show differences in the ability to guide cell and axon migrations, suggesting that the V-3 domain is responsible for different
interactions between UNC-6 and either migrating cells or growth cones.
The unc-6(rh46) and unc-6(rh46 ev436) are alleles
that disrupt the coding sequence of the VI domain. The rh46
allele introduces an alanine to proline substitution near the middle of
VI, whereas rh46 ev436, is a pseudorevertant of
rh46 that introduces another substitution, a threonine for
an alanine, near the end of VI (Wadsworth et al., 1996 ). We assayed the
effects of these alleles to compare the effects of these mutations with
those caused by the expression of VI transgenes. Similar to the
phenotypes caused by the expression of the unc-6 VI8
transgene, the unc-6(rh46)and unc-6(ev436)
mutations also cause a temperature-sensitive loss of guidance activity
(Tables 2, 3). The results from previous assays suggested that the
ev436 pseudorevertant restores growth cone but not cell
guidance activity (Hedgecock et al., 1990 ). The results presented here
show that the restored activity is heat sensitive. The degree to which
different migrations are rescued depends on the temperature at which
the assays are performed.
Together these results indicate that point mutations within the coding
sequences of the VI, V-2, and V-3 domains each produce unique
phenotypes that are similar to those produced by the expression of the
transgenes that delete or alter the same domain. This strongly supports
the idea that the phenotypes produced by the transgenes are caused by
expression of altered protein products.
 |
DISCUSSION |
UNC-6 domains that mediate different guidance functions
Previous studies indicated that the guidance
activities of UNC-6 are mediated through distinct domains (Hedgecock et
al., 1990 ; Wadsworth et al., 1996 ). Several alleles of unc-6
that cause selective loss of dorsal guidance activity encode for a
protein specifically lacking the V-2 domain. Furthermore, two
selective loss-of-function alleles that disrupt tissue- and
direction-specific guidance were found to be point
mutations within domain VI. However, these studies did not show whether
the V-2 domain was the only domain required for dorsal guidance,
whether other domains are associated with other UNC-6 guidance
functions, or how indicative the VI domain point mutations are of
domain VI function. The systematic approach taken in this study has
addressed these issues and provided evidence that both
direction-specific (dorsal versus ventral) and tissue-specific
(ectodermal growth cones versus mesodermal cells) guidance requires a
combination of different UNC-6 domains.
Dorsal and ventral migrations are mediated by the UNC-6 V-2 and V-3
domains. Deletion of either the V-2 or V-3 domain disrupts dorsal
migrations to the same degree as the unc-6(ev400)
loss-of-function allele (Table 1). The dorsal guidance activities
appear to require the combination of the two domains because
substituting a V-3 for the V-2 domain does not restore dorsal guidance
functions. The severity of the dorsal guidance defects is similar among
unc-5 null mutants and the mutants expressing UNC-6 V-2,
UNC-6 V-3, or UNC-6V1-3-3 (Table 1), suggesting that disrupting the
V-2 or V-3 domains interferes with the ability of UNC-6 to interact with the UNC-5 receptor. Among the UNC-6 derivatives, V-3 most closely resembles the cell and axon ventral defects of the
unc-40 mutant (Table 1), suggesting that V-3 is involved in
the interaction with UNC-40. Loss of either flanking domain, as in
V-2, C, and V-1-3-3 animals, causes a less severe loss of
ventral guidance function, suggesting that the flanking domains may
influence the interaction between domain V-3 and UNC-40.
The V-3 domain appears to mediate different interactions between UNC-6
and either migrating cells or growth cones. The unc-6(e78) allele, which disrupts domain V-3, specifically interferes with dorsal
axon migrations but not dorsal cell migrations or any ventral migrations (Table 1). Furthermore, deletion of V-3 more strongly disrupts ventral cell migrations than ventral axon migrations. Interestingly, the phenotypes of UNC-5 and UNC-40 mutants do suggest that these receptors mediate responses differently for cells and growth
cones. This raises the possibility that unknown cell type-specific UNC-6 receptors associate with the V-3 domain. Alternatively, domain
V-3 may influence a difference in the manner in which UNC-6 interacts
on cells and growth cones with the UNC-5 and UNC-40 receptors.
Domain VI is essential for all UNC-6 guidance functions. Interestingly,
the short but conserved laminin subunit motif within domain VI is
critical, suggesting that it may be a site of molecular interaction.
Two mutations within domain VI selectively disrupt the guidance
activities. The temperature-sensitive unc-6(rh46 ev436)
allele selectively restores growth cone migrations, whereas the
unc-6(ev400 ev437) allele, which replaces the domain VI
residues glutamine-serine-histidine at positions 78-80 with two
serines, disrupts ventral migrations but not dorsal migrations of both axons and cells (Hedgecock et al., 1990 ; Wadsworth et al., 1996 ). The
observation that these two alleles selectively disrupt the different
guidance activities of UNC-6 provides further evidence that domain VI
is required for all guidance activities. It is possible that this
domain is involved directly in the association of UNC-6 with UNC-5 and
UNC-40. Alternatively, this domain could indirectly affect UNC-5 and
UNC-40 signaling through interactions with other receptors and the
extracellular matrix. By influencing properties of cell adhesion, the
domain could alter cytoskeletal dynamics that are tied to both
UNC-5 and UNC-40 responses.
Model for parallel UNC-6 signaling
Guidance involves dynamic changes to the cytoskeleton and cell
adhesion properties of the migrating cell or growth cone. Our results
suggest that the combined activities of different domains mediate UNC-6
guidance (Fig. 5). We propose that domain
VI plays a key role in coordinating the cytoskeletal machinery and
allowing a response to UNC-6 and that domains V-2 and V-3 elicit
signals that specifically direct attraction or repulsion. Finally, the C domain provides a signal that prevents axon branching in response to
the signals elicited by the N-terminal domains (Lim et al., 1999 ; Wang
and Wadsworth, 2002 ). In this model, the modular nature of the UNC-6
molecule is associated with the parallel signals, and the combination
of UNC-6 modules regulates multiple aspects of the guidance
machinery.

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|
Figure 5.
A summary of the proposed function for each of the
UNC-6 domains. The combination of domains elicits parallel signals that
together mediate the different cytoskeletal changes necessary for
guidance.
|
|
Our results form the basis for further biochemical studies to
investigate molecular interactions between UNC-6/netrin and its
receptors. Two UNC-6 receptors are known: UNC-5 mediates repulsion, i.e., migration away from UNC-6 sources, whereas UNC-40 is involved in
both attraction and repulsion (Hedgecock et al., 1990 ). For the
repulsive response, it is thought that UNC-5 and UNC-40 can act either
independently or together through the formation of UNC-5 or UNC-5 and
UNC-40 receptor complexes (Merz et al., 2001 ). Studies in
vitro support such receptor interactions (Hong et al., 1999 ). We
speculate that these receptor complexes form primarily through an
association with the V-2 and V-3 domains. Although our results also
support the possibility that domain VI is involved, we favor the
possibility that this domain interacts with other receptors and the
extracellular matrix to mediate cytoskeletal and adhesion changes
necessary for the UNC-5 and UNC-40 responses. Finally, our results
indicate that domain V-3 is responsible for a difference between the
ability of cells and growth cones to respond to UNC-6. The molecular
explanation for this difference also requires further research.
 |
FOOTNOTES |
Received March 6, 2002; revised May 1, 2002; accepted May 9, 2002.
This work was supported by National Institutes of Health Grant NS33156.
We thank Christopher Quinn for comments on this manuscript, members of
the Wadsworth laboratory for helpful discussions, Xing-Cong Ren for
assistance with microinjection, the Caenorhabditis Genetics Center for
strains, and Joseph Culotti, Edward Hedgecock, Harold Hutter, and David
Pilgrim for generously providing GFP marker strains.
Correspondence should be addressed to William G. Wadsworth, Department
of Pathology, Robert Wood Johnson Medical School, 675 Hoes Lane,
Piscataway, NJ 08854-5635. E-mail:
william.wadsworth{at}umdnj.edu.
 |
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