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Previous Article | Next Article
Identification of Proteins in the Postsynaptic Density Fraction by Mass Spectrometry
Randall S. Walikonis1, Ole N. Jensen2, Matthias Mann2, D. William Provance Jr3, John A. Mercer3, and Mary B. Kennedy1 1 Division of Biology, California Institute of Technology, Pasadena, California 91125, 2 European Molecular Biology Laboratory, D69012 Heidelberg, Germany, and 3 McLaughlin Research Institute, Great Falls, Montana 59405-4900
Our understanding of the organization of postsynaptic signaling systems at excitatory synapses has been aided by the identification of proteins in the postsynaptic density (PSD) fraction, a subcellular fraction enriched in structures with the morphology of PSDs. In this study, we have completed the identification of most major proteins in the PSD fraction with the use of an analytical method based on mass spectrometry coupled with searching of the protein sequence databases. At least one protein in each of 26 prominent protein bands from the PSD fraction has now been identified. We found 7 proteins not previously known to be constituents of the PSD fraction and 24 that had previously been associated with the PSD by other methods. The newly identified proteins include the heavy chain of myosin-Va (dilute myosin), a motor protein thought to be involved in vesicle trafficking, and the mammalian homolog of the yeast septin protein cdc10, which is important for bud formation in yeast. Both myosin-Va and cdc10 are threefold to fivefold enriched in the PSD fraction over brain homogenates. Immunocytochemical localization of myosin-Va in cultured hippocampal neurons shows that it partially colocalizes with PSD-95 at synapses and is also diffusely localized in cell bodies, dendrites, and axons. Cdc10 has a punctate distribution in cell bodies and dendrites, with some of the puncta colocalizing with PSD-95. The results support a role for myosin-Va in transport of materials into spines and for septins in the formation or maintenance of spines.
Key words: synaptic transmission; myosin; septins; vesicle transport; signal transduction; multiprotein complex
Copyright © 2000 Society for Neuroscience 0270-6474/00/20114069-12$05.00/0
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[Abstract] [Full Text] [PDF]
X.-R. Peng, Z. Jia, Y. Zhang, J. Ware, and W. S. Trimble
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[Abstract] [Full Text] [PDF]
O. Prange and T. H. Murphy
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[Abstract] [Full Text] [PDF]
S. G. N. Grant and W. P. Blackstock
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[Abstract] [Full Text] [PDF]
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Calcium regulation of neuronal gene expression
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[Abstract] [Full Text] [PDF]
M. G. Giovannini, R. D. Blitzer, T. Wong, K. Asoma, P. Tsokas, J. H. Morrison, R. Iyengar, and E. M. Landau
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J. Neurosci., September 15, 2001; 21(18): 7053 - 7062.
[Abstract] [Full Text] [PDF]
W. Zhang and D. L. Benson
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J. Neurosci., July 15, 2001; 21(14): 5169 - 5181.
[Abstract] [Full Text] [PDF]
O. Steward and P. F. Worley
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[Abstract] [Full Text] [PDF]
E. Schnell and R. A. Nicoll
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[Abstract] [Full Text] [PDF]
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J. Neurosci., April 1, 2001; 21(7): 2488 - 2500.
[Abstract] [Full Text] [PDF]
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[Abstract] [Full Text] [PDF]
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[Abstract] [Full Text] [PDF]
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J. Cell Sci., January 3, 2001; 114(5): 839 - 844.
[Abstract] [PDF]
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[Abstract] [Full Text] [PDF]
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