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The Journal of Neuroscience, January 15, 2000, 20(2):709-721
A Highly Conserved Enhancer in the Dlx5/Dlx6
Intergenic Region is the Site of Cross-Regulatory Interactions between
Dlx Genes in the Embryonic Forebrain
Ted
Zerucha1, 2,
Thorsten
Stühmer3,
Gary
Hatch1,
Byung K.
Park1,
Qiaoming
Long1,
Guoying
Yu3,
Adrianna
Gambarotta1,
Joshua R.
Schultz4,
John L. R.
Rubenstein3, and
Marc
Ekker1, 2
1 Loeb Health Research Institute at the Ottawa Hospital
and Department of Medicine, and 2 Department of Cellular
and Molecular Medicine, University of Ottawa, Ottawa, Ontario K1Y 4E9,
Canada, 3 Nina Ireland Laboratory of Developmental
Neurobiology, Center for Neurobiology and Psychiatry, Department of
Psychiatry and Programs in Neuroscience, Developmental Biology, and
Biomedical Sciences, University of California at San Francisco, San
Francisco, California 94143-0984, and 4 Tularik Inc., South
San Francisco, California 94080
Four Dlx homeobox genes, Dlx1,
Dlx2, Dlx5, and Dlx6 are
expressed in the same primordia of the mouse forebrain with temporally overlapping patterns. The four genes are organized as two tail-to-tail pairs, Dlx1/Dlx2 and Dlx5/Dlx6, a genomic
arrangement conserved in distantly related vertebrates like zebrafish.
The Dlx5/Dlx6 intergenic region contains two sequences
of a few hundred base pairs, remarkably well conserved between mouse
and zebrafish. Reporter transgenes containing these two sequences are
expressed in the forebrain of transgenic mice and zebrafish with
patterns highly similar to endogenous Dlx5 and
Dlx6 expression. The activity of the transgene is
drastically reduced in mouse mutants lacking both Dlx1
and Dlx2, consistent with the decrease in endogenous Dlx5 and Dlx6 expression. These results
suggest that cross-regulation by Dlx proteins, mediated by the
intergenic sequences, is essential for Dlx5 and
Dlx6 expression in the forebrain. This
hypothesis is supported by cotransfection and DNA-protein binding
experiments. We propose that the Dlx genes are part of a
highly conserved developmental pathway that regulates forebrain development.
Key words:
diencephalon; evolution; homeobox; mouse; striatum; telencephalon; zebrafish
Copyright © 2000 Society for Neuroscience 0270-6474/00/202709-13$05.00/0
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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[Abstract]
[PDF]
|
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|