Table 1.

PCR primers used in the RT-PCR protocol for astrocytes and pyramidal cells

Gene accession #First PCR primersSize (bp)Second PCR nested primersSize (bp)
GFAPSense, 454 AGCTCCAAGATGAAACCAACCTa631Sense, 509 ACAGACAGGAGGCGGATGAA263
NM_017009Antisense, 1066 CGATCTCGATGTCCAGGGCaAntisense, 749 GGACCGATACCACTCTTCTGTTT
S100βSense, 45 CATCAGTATTCAGGGAGAGAGGG166Sense, 58 GGGAGAGAGGGTGACAAGCA132
NM_013191.1Antisense, 191 GTCACACTCCCCATCCCCATAntisense, 170 TTCGTCCAGCGTCTCCATCA
COX-1Sense, 27 GTTTCCCCTGCTGCTGCTC359Sense, 137 AGGGTGTCTGTGTCCGCTTC185
NM_017043.1Antisense, 366 GGCTGGGGATAAGGTTGGACAntisense, 301 GGCATTCACAAACTCCCAGAT
COX-2Sense, 199 CTGAAGCCCACCCCAAACAC247Sense, 202 AAGCCCACCCCAAACACAGT206
NM_017232.2Antisense 426 TGGGAGTTGGGCAGTCATCAAntisense, 384 CTGGTGTAGTAGGAGAGGTTGGAG
VGluT1bSense, 361 GGCTCCTTTTTCTGGGGGTACb259Sense, 373 TGGGGGTACATTGTCACTCAGAb201
NM_053859.1Antisense, 600 CCAGCCGACTCCGTTCTAAGbAntisense, 553 ATGGCAAGCAGGGTATGTGACb
  • Position 1, first base of the start codon.

  • aLambolez et al., 1992.

  • bGallopin et al., 2006.