Table 1.

Validation of RIP-ChIP by RIP-qPCR

Gene symbol	Gene name	NB		P5
Gene symbol	Gene name	Array	qPCR	Array	qPCR
Proliferation
Ccnd1	Cyclin D1	5.54^*	5.17^*	1.32^n.s.	1.12^n.s.
Ccnd2	Cyclin D2	1.56^*	2.31^*	1.41^n.s.	1.19^n.s.
Cdk2	Cyclin-dependent kinase 2	2.55^*	3.35^*	1.29^n.s.	1.63^n.s.
Serpine2	Serine (or cysteine) peptidase inhibitor, clade E, member 2	1.78^*	3.74^*	−1.04^n.s.	1.61^n.s.
Brd4	Bromodomain containing 4	2.13^*	3.73^*	1.29^n.s.	1.12^n.s.
Erbb2	v-erb-b2 erythroblastic leukemia viral oncogene homolog 2	1.76^*	5.17^*	1.00^n.s.	1.09^n.s.
Sox9	SRY-box containing gene 9	3.38^*	7.86^*	1.70^*	3.93^*
Shc1	Src homology 2 domain-containing transforming protein C1	3.19^*	6.52^*	1.35^n.s.	1.09^n.s.
Cell morphology
Actb	Actin, beta	59.1^*	63.9^*	26.3^*	29.5^*
Ncam1	Neural cell adhesion molecule 1	2.34^*	4.65^*	1.38^n.s.	1.06^n.s.
Pfn1	Profilin 1	3.98^*	4.65^*	5.56^*	5.08^*
Ahnak	AHNAK nucleoprotein (desmoyokin)	16.5^*	12.7^*	6.79^*	6.89^*
Lamc1	Laminin, gamma 1	2.32^*	4.45^*	1.06^n.s.	1.35^n.s.
Calm3	Calmodulin 3	6.62^*	16.1^*	2.66^*	7.18^*
Igfbp5	Insulin-like growth factor binding protein 5	4.29^*	3.86^*	1.69^n.s.	1.51^n.s.
Marcks	Myristoylated alanine-rich protein kinase C substrate	4.57^*	9.83^*	1.15^n.s.	1.60^n.s.
Apoptosis
Casp2	Caspase 2	1.99^*	5.11^*	1.14^n.s.	1.87^n.s.
Casp9	Caspase 9	1.89^*	3.68^*	1.32^n.s.	1.68^n.s.
Aatk	Apoptosis-associated tyrosine kinase	7.08^*	12.6^*	2.74^*	5.20^*
Btg1	B-cell translocation gene 1	2.82^*	4.71^*	1.13^n.s.	1.58^n.s.
Map3k1	Mitogen-activated protein kinase kinase kinase 1	1.7^*	4.51^*	1.12^n.s.	1.14^n.s.
Cd44	CD44 antigen	1.99^*	6.24^*	1.47^n.s.	5.01^*
Pdcd4	Programmed cell death 4	2.57^*	8.60^*	2.11^*	7.48^*
Vdac1	Voltage-dependent anion channel 1	3.09^*	6.14^*	1.82^n.s.	3.63^*

↵*p < 0.05; n.s., not significant.