Table 2.

Summary of statistics for microglia following CHI^{^a}

Measure	Figure	Two-way ANOVA		Time p.i.	One-way ANOVA	WT, sham vs CHI	KI, sham vs CHI	CHI, WT vs KI
IBA1	4c	F_(11,86) = 4.4416		9 h
IHC		p < 0.0001^*		1 d	F_(3,20) = 3.4323; p = 0.0367^*	p = 0.0071^‡	p = 0.2629	p = 0.5042
Positive pixels cortex		Group	p = 0.004^*	7 d	F_(3,24) = 3.0262; p = 0.0491^*	p = 0.0332^‡	p = 0.0306^§	p = 0.5933
		Time p.i	p = 0.1715	1 mo
		Interaction	p = 0.0070^*	2 mo	F_(3,42) = 7.4269; p = 0.0004^*	p = 0.3316	p = 0.8538	p = 0.0129^⋆
CX3CR1	4c	F_(19,96) = 1.2676		9 h	F_(3,19) = 0.1864; p = 0.9043	p = 0.7775	p = 0.9694	p = 0.5324
Assay ID: Mm02620111_s1		p = 0.2234		1 d	F_(3,19) = 0.1802; p = 0.9085	p = 0.2929	p = 0.9347	p = 0.6569
qRT-PCR		Group	p = 0.2030	7 d	F_(3,19) = 0.6103; p = 0.6165	p = 0.5164	p = 0.9347	p = 0.5818
Cortex		Time p.i	p = 0.0107^*	1 mo	F_(3,19) = 0.8656; p = 0.4760	p = 0.1947	p = 0.9189	p = 0.8573
Cortex		Interaction	p = 0.9458	2 mo	F_(3,20) = 1.0179; p = 4056	p = 0.9625	p = 0.2173	p = 0.1603
CCR2	4c	F_(19,96) = 1.8913		9 h	F_(3,19) = 0.9515; p = 0.4356	p = 0.9501	p = 0.6583	p = 0.1711
Assay ID: Mm00438270_m1		p = 0.0233^*		1 d	F_(3,19) = 0.3820; p = 0.7671	p = 0.8676	p = 0.3102	p = 0.5965
qRT-PCR		Group	p = 0.1590	7 d	F_(3,19) = 0.8827; p = 0.4677	p = 0.1961	p = 0.7296	p = 0.8286
Cortex		Time p.i	p = 0.0610	1 mo	F_(3,19) = 1.7086; p = 0.1991	p = 0.9751	p = 0.0699	p = 0.1083
Cortex		Interaction	p = 0.0769	2 mo	F_(3,20) = 0.9666; p = 0.4279	p = 0.3124	p = 0.9882	p = 0.6720
CD68	4c	F_(19,96) = 2.3625		9 h	F_(3,19) = 2.5462; p = 0.0865	p = 0.0411	p = 0.1768	p = 0.2849
Assay ID: Mm00839636_g1		p = 0.0033		1 d	F_(3,19) = 1.2658; p = 0.3144	p = 0.0836	p = 0.8098	p = 0.2244
qRT-PCR		Group	p = 0.0007^*	7 d	F_(3,19) = 4.5303; p = 0.0147^*	p = 0.0405^‡	p = 0.0333^§	p = 0.1941
Cortex		Time p.i	p = 0.0091^*	1 mo	F_(3,19) = 0.7271; p = 0.5483	p = 0.2061	p = 0.7607	p = 0.7394
Cortex		Interaction	p = 0.4712	2 mo	F_(3,20) = 0.9680; p = 0.4273	p = 0.1235	p = 0.6449	p = 0.4371
MHCII	4c	F_(19,96) = 0.9847		9 h	F_(3,19) = 1.0969; p = 0.3747	p = 0.2963	p = 0.8076	p = 0.7030
Assay ID: Mm00439216_m1		p = 0.4854		1 d	F_(3,19) = 0.3209; p = 0.8102	p = 0.9197	p = 0.9758	p = 0.5301
qRT-PCR		Group	p = 0.3485	7 d	F_(3,19) = 0.9623; p = 0.4308	p = 0.9468	p = 0.1823	p = 0.1763
Cortex		Time p.i	p = 0.4557	1 mo	F_(3,19) = 1.7895; p = 0.1833	p = 0.0446	p = 0.4158	p = 0.6600
Cortex		Interaction	p = 0.5043	2 mo	F_(3,20) = 1.1880; p = 0.3395^*	p = 0.2225	p = 0.1803	p = 0.9253

↵^a*Denotes significant effect by ANOVA.
↵‡Denotes significant difference between WT + sham vs. WT + CHI.
↵§Denotes significant difference between KI + sham vs. KI + CHI.
↵⋆Denotes significant difference between WT + CHI vs. KI + CHI.