The lipocalin protein family: structural and sequence overview

Biochim Biophys Acta. 2000 Oct 18;1482(1-2):9-24. doi: 10.1016/s0167-4838(00)00148-5.

Abstract

Lipocalins are remarkably diverse at the sequence level yet have highly conserved structures. Most lipocalins share three characteristic conserved sequence motifs - the kernel lipocalins - while others are more divergent family members - the outlier lipocalins - typically sharing only one or two. This classification is a useful tool for analysing the family, and within these large sets are smaller groups sharing much higher levels of sequence similarity. The lipocalins are also part of a larger protein superfamily: the calycins, which includes the fatty acid binding proteins, avidins, a group of metalloproteinase inhibitors, and triabin. The superfamily is characterised by a similar structure (a repeated +1 topology beta-barrel) and by the conservation of a remarkable structural signature.

Publication types

  • Review

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Carrier Proteins / chemistry*
  • Fatty Acid-Binding Protein 7
  • Fatty Acid-Binding Proteins
  • Humans
  • Insect Proteins*
  • Lactoglobulins / chemistry*
  • Models, Molecular
  • Molecular Sequence Data
  • Neoplasm Proteins*
  • Protein Conformation
  • Sequence Homology, Amino Acid
  • Tumor Suppressor Proteins*

Substances

  • Carrier Proteins
  • FABP7 protein, human
  • Fatty Acid-Binding Protein 7
  • Fatty Acid-Binding Proteins
  • Insect Proteins
  • Lactoglobulins
  • Neoplasm Proteins
  • Tumor Suppressor Proteins
  • bilin-binding protein, insect