Cloning of a functional vesicular GABA and glycine transporter by screening of genome databases

FEBS Lett. 1997 Nov 10;417(2):177-83. doi: 10.1016/s0014-5793(97)01279-9.

Abstract

The unc-47 locus of Caenorhabditis elegans has been suggested to encode a synaptic vesicle GABA transporter. Here we used hydropathy plot analysis to identify a candidate vesicular GABA transporter in genomic sequences derived from a region of the physical map comprising unc-47. A mouse homologue was identified and cloned from EST database information. In situ hybridization in rat brain revealed codistribution with both GABAergic and glycinergic neuronal markers. Moreover, expression in COS-7 and PC12 cells induced an intracellular, glycine-sensitive GABA uptake activity. These observations, consistent with previous data on GABA and glycine uptake by synaptic vesicles, demonstrate that the mouse clone encodes a vesicular inhibitory amino acid transporter.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Amino Acid Transport Systems, Neutral*
  • Animals
  • Base Sequence
  • Caenorhabditis elegans / enzymology
  • Caenorhabditis elegans / genetics*
  • Caenorhabditis elegans Proteins
  • Carrier Proteins / genetics*
  • Cloning, Molecular / methods
  • Cosmids
  • Databases, Factual
  • GABA Plasma Membrane Transport Proteins
  • Genes, Helminth*
  • Glycine Plasma Membrane Transport Proteins
  • Humans
  • In Situ Hybridization
  • Membrane Proteins / genetics*
  • Membrane Transport Proteins*
  • Mice
  • Molecular Sequence Data
  • Organic Anion Transporters*
  • Rats
  • Sequence Alignment
  • Tissue Distribution
  • Vesicular Inhibitory Amino Acid Transport Proteins

Substances

  • Amino Acid Transport Systems, Neutral
  • Caenorhabditis elegans Proteins
  • Carrier Proteins
  • GABA Plasma Membrane Transport Proteins
  • Glycine Plasma Membrane Transport Proteins
  • Membrane Proteins
  • Membrane Transport Proteins
  • Organic Anion Transporters
  • Vesicular Inhibitory Amino Acid Transport Proteins
  • unc-47 protein, C elegans

Associated data

  • GENBANK/AJ001598