Abstract
In the adult CNS, neurogenesis takes place in special niches. It is not understood how these niches are formed during development and how they are maintained. In contrast to mammals, stem cell niches are abundant in zebrafish and also found in other parts of the brain than telencephalon. To understand common characteristics of neural stem cell niches in vertebrates, we studied the origin and architecture of a previously unknown stem cell niche using transgenic lines, in vivo imaging, and marker analysis. We show that bipotent stem cells are maintained in a distinct niche in the adult zebrafish cerebellum. Remarkably, the stem cells are not typical glia but instead retain neuroepithelial characteristics. The cerebellar stem cell niche is generated by the coordinated displacement of ventricle and rhombic lip progenitors in a two-step process involving morphogenetic movements and tissue growth. Importantly, the niche and its stem cells still remain in ventricular contact through a previously unknown derivative of the ventricle. Factors propagated in the ventricle are thought to be important regulators of stem cell activity. To test the requirements of one family of important factors, Fibroblast growth factors, we used zebrafish with an inducible dominant-negative Fgf receptor. Inhibition of Fgf signaling leads to significant reduction of stem cell activity. In contrast to the predominant view, adult neural stem cells in nonmammalian vertebrates show more neuroepithelial than glial characteristics. Nevertheless, retained epithelial properties such as distinct polarization and ventricular contact are critical common determinants to maintain neural stem cell activity in vertebrates.
Introduction
Most neurons in the vertebrate CNS are generated during embryonic development. However, limited neurogenesis takes place in special microenvironments, stem cell niches, that are maintained into adulthood (Alvarez-Buylla and Lim, 2004). The niche is a key regulator of stem cells in vivo (Fuchs et al., 2004; Decotto and Spradling, 2005). It is not well understood how neural stem cell niches are formed during development and how they are maintained postembryonically.
In the CNS of adult mammals and birds, neurogenic stem cell niches are restricted to one brain region, the telencephalon. In other vertebrates, such as teleost fish, stem cell niches are more abundant and also found in parts of the brain other than the telencephalon (Kaslin et al., 2008). Zebrafish has a widespread life-long neurogenesis that generates many different subtypes of neurons (Zupanc et al., 2005; Adolf et al., 2006; Grandel et al., 2006). The progenitors form 16 distinct niches that are distributed along the entire rostrocaudal brain axis (Grandel et al., 2006). This makes zebrafish a suitable model to study how stem cell niches from different brain regions are constituted and maintained. During vertebrate development, neurogenesis in different brain regions follows a strict temporal sequence. In mammals and birds, the generation of cerebellar granule cells is continued postembryonically for several weeks but eventually ceases. Remarkably, in the zebrafish cerebellum abundant life-long neurogenesis takes place. In fact, this brain region shows the most abundant neurogenesis in the adult zebrafish (Grandel et al., 2006). Detailed analysis of an adult brainstem cell niche other than the telencephalon of mammals is missing. To understand common characteristics of neural stem cell niches in vertebrates, we studied the origin and architecture of a novel stem cell niche, the cerebellar stem cell niche, in zebrafish.
We show that neural stem cells are maintained in a highly specialized niche in adult zebrafish. This niche consists of a small pool of distinctly polarized stem cells that are demarcated by apical markers and flanked medially and laterally by two different populations of glia. Stem cells in this niche are bipotent, and express neural stem cell and upper rhombic lip markers. It is thought but has not been shown that radial glia serve as progenitors in the adult CNS of nonmammalian vertebrates. To our surprise, the proliferating stem cells in the cerebellum do not express canonical radial or astroglial markers but retain neuroepithelial characteristics. We show that this distinct stem cell niche is generated in a two step process that initially involves morphogenetic movements and later tissue growth. Because of these processes, upper rhombic lip progenitors and a small portion of the ventricle are displaced deep into the tissue. Importantly, we find that a derivative of the IVth ventricle, the cerebellar recessus, still connects the niche to the ventricular system and that the stem cells remain in direct ventricular contact. Furthermore, we show that granule neurons and glia are generated in the adult cerebellum. Our results in developing and adult zebrafish show that there is no formation of a prominent external granule layer. Instead, there is a continuous supply of granule precursors from the cerebellar stem cell niche to the granule cell layer. The cells that turn into granule cell precursors molecularly progress and migrate in a similar manner to mammalian granule cells. To test the requirement for Fgf signaling in the adult cerebellar stem cell niche, we used transgenic zebrafish to misexpress a dominant-negative Fgf receptor. We show that inhibition of Fgf signaling significantly reduces stem cell activity in the adult cerebellum.
Materials and Methods
Zebrafish strains and treatment of fish.
Zebrafish were bred and maintained according to standard procedures (Westerfield, 2000). Wild-type experimental fish were from the gol-b1 line in the AB genetic background. Adult fish were 6–8 months old and had a 24–28 mm body length. All animal procedures were approved by the Regierungspräsidium Dresden. The Tg(gfap:GFP) zebrafish line expresses enhanced green fluorescent protein (EGFP) under the control of the zebrafish gfap promoter, recapitulating the endogenous GFAP pattern (Bernardos and Raymond, 2006). The Tg(EF1α:DsRed2) zebrafish line expresses DsRed2 under the control of the Xenopus Elongation Factor 1 α (EF1α) promoter (Hans et al., 2009). The EF1α promoter expresses DsRed2 ubiquitously in the neural tube during early juvenile stages. A single heat shock strongly and uniformly induces dn-fgfr1 transgene expression for at least 24 h, and daily heat treatments efficiently block Fgf signaling (Lee et al., 2005). The hsp70:dnfgfr1 construct can interact with all Fgfr subtypes and thereby competitively block signaling downstream of all Fgfr subtypes. hsp70:dn-fgfr1 fish and wild-type siblings were heat induced once and the day (24 h) after the induction received a 4 h BrdU pulse before kill. For experiments with the homozygous hsp70:dn-fgfr1 fish strain, age and size matched control fish were used.
Generation of Tg(nestin:GFP) transgenic line.
Independent BACs containing the genomic nestin locus were obtained from the BACPAC resource center. BAC CH 73–2F9 containing 41 Kb of the genomic nestin locus was used. The coding sequence of nestin was flanked by 13.5 Kb upstream and 18.1 Kb downstream sequence. To make a reporter line, a cassette containing an EGFP-tagged nitroreductase and a polyadenylation signal was recombineered at the starting ATG of exon 1. First, FRT-gb-neo-FRT and ntr-EGFP cassettes where amplified by PCR. Then, the cassettes where amplified and merged by Fusion PCR with primers carrying 50 nt of homology of the targeting sequence. Recombineering of the BAC was performed as previously described (Zhang et al., 1998). BAC DNA was purified with an endotoxin-free large construct kit (Nucleobond, Macherey-Nagel) and 25–100 pg of BAC DNA were injected into fertilized eggs at the one cell stage. F0 were raised and incrossed. F1 were identified by visual screening for GFP expression.
Tissue preparation.
Exposed brains in skull were fixed at 4°C overnight in 2–4% paraformaldehyde/0.1 m phosphate buffer (PB), pH 7.5. They were washed twice with PB and transferred for decalcification and cryoprotection into 20% sucrose/20% EDTA in 0.1 m PB, pH7.5. Brains were frozen in 7.5% gelatin/20% sucrose and cut at 14 μm. Sections were stored at −20°C.
In vivo imaging and dye injections.
Live embryos or zebrafish were anesthetized with 0.1% tricaine (Sigma), mounted in 1.5% low-melting point agarose in embryo medium 3 (E3) and imaged with a Leica TCS SP5 confocal microscope. For in vivo imaging of ventricles, dextran rhodamine B 70 kDa (35 mg/ml, Invitrogen) was slowly injected into the IIIrd or IVth ventricle with a fine glass needle. Skin and bone were carefully removed from the dorsal cranium of juveniles older than 7 dpf and adult fish. Juvenile and adult fish were kept anesthetized in artificial fresh water CSF (McElligott et al., 1998) during imaging.
BrdU labeling.
To label cycling cells, zebrafish were immersed in 10 mm BrdU (Sigma) solution (Grandel et al., 2006). The BrdU was dissolved in E3 medium and the pH adjusted to 7.5.
Immunohistochemistry and in situ hybridization.
Immunohistochemistry was performed as previously described (Kaslin et al., 2004; Grandel et al., 2006). Briefly, primary and secondary antibodies were incubated in PBS with 0.3% TX. Primary antibodies were incubated overnight at 4 C° and secondary antibodies for 1 h at room temperature. The slides were then washed in PBS TX and mounted. Information about the primary antibodies is given in supplemental Table 1, available at www.jneurosci.org as supplemental material. Alexa 488-, 555-, and 633-conjugated secondary antibodies were used for detection (Invitrogen). In situ hybridization and probe generation was performed as previously described (Kaslin et al., 2004). Information about the in situ probes is given in supplemental Table 2, available at www.jneurosci.org as supplemental material. All immunostainings and in situ hybridizations were done on at least three individuals.
Generation of Musashi1 antibody.
The synthetic peptides MESEGSQSNLSSSDS and SMVMRDPVTKRSRGF from the N terminus of zebrafish Musashi1 were used to generate polyclonal antibodies produced in rabbits according to standard procedures. Specificity of the antibodies was verified by blocking peptide experiments and immunohistochemistry and Western blotting.
Image acquisition and processing.
Images were taken with Zeiss-LSM-META and Leica TCS-SP5 confocal microscopes. To minimize cross talk between the channels in multicolored specimens, sequential image acquisition was performed. Images were processed using ImageJ v.1.32 (http://rsb.info.nih.gov/ij/), Volocity and Adobe Photoshop CS2. Figures were assembled using Adobe Photoshop CS2 and Corel Draw X3.
Cell counting and statistical analysis.
We quantified the number of BrdU+ cells in every second section (14 μm) throughout the whole cerebellar corpus. Statistical significance was tested with a nonpaired Student's t test.
Results
Stem cells reside in a distinct location in the adult zebrafish cerebellum
To separate cells with different proliferative behaviors and to identify cells displaying progenitor potential, we performed a series of BrdU pulse chase experiments in combination with detecting the proliferation markers, proliferating cell nuclear antigen (PCNA) and phospho-histone H3 (pH3), and histological markers (fluorescent Nissl staining). Two major proliferation zones are present in the cerebellum of adult zebrafish (zone 14 a and b) (Fig. 1; supplemental Fig. S1, available at www.jneurosci.org as supplemental material) (Grandel et al., 2006). The first of these zones is restricted to the dorsal midline of the nonvestibular cerebellar regions, the cerebellar corpus and its anterior extension the valvula cerebelli (Fig. 1; supplemental Fig. S1, available at www.jneurosci.org as supplemental material). The second proliferation zone is found caudolaterally in the caudal lobe of the cerebellum (supplemental Fig. S1, available at www.jneurosci.org as supplemental material). Here, we focus on progenitors in the cerebellar corpus (14a).
Proliferation markers and pulse chase experiments showed that proliferating cells originate from a distinct cap-like structure in the dorsomedial corpus cerebelli and valvula cerebelli (Fig. 1B,E; supplemental Fig. S1, available at www.jneurosci.org as supplemental material). This cap-like structure is located in the midline at the interface between the molecular and granular cell layer (Fig. 1B,E). To identify putative stem cells in the cerebellum, we performed a label retention assay. Cells were designated as label retaining if they retained BrdU over a long time and still displayed a marker of ongoing proliferation (PCNA, pH3). We performed BrdU pulse (4 h–2 d) and long chase experiments (4–6 weeks chase) in combination with a second proliferation marker (PCNA). Long BrdU pulse chase experiments showed that the majority of BrdU-positive cells rapidly migrate out from the cap-like structure (Fig. 1C–G). Furthermore, BrdU was quickly diluted out in PCNA-positive proliferating cells and BrdU-labeled clones of migrating cells were detected emanating from the proliferating cells in the cap (Fig. 1C,D,F,G). Regardless of the BrdU pulse length (4 h–2 d continuous labeling), only a few label-retaining cells remained in the cap after 1 week of chase time (Fig. 1D,G). After 4–6 weeks chase time, few BrdU-positive cells were found in the cap (8.3 cells, SEM 2.29, n = 6) (Fig. 1G; supplemental Fig. S2J,K, available at www.jneurosci.org as supplemental material). This data show that adult cerebellar stem cells are confined to a distinct zone in the dorsal cerebellum (summarized in Fig. 5).
Adult cerebellar progenitors express neural stem cell markers
Next, we studied the expression of canonical neural stem cell markers in the cerebellar progenitors. The intermediate filament Nestin is a widely used marker for neural stem cells and is strongly expressed by mammalian cerebellar progenitors (Lendahl et al., 1990; Wang and Zoghbi, 2001). We created a transgenic zebrafish line Tg(nestin:GFP) using BAC recombineering technology. In this transgenic line, GFP expression is driven by nestin regulatory elements and recapitulates reported nestin mRNA expression (data not shown) (Mahler and Driever, 2007). In the adult zebrafish cerebellum, Nestin:GFP was expressed in proliferating and migrating cells (Fig. 2A–C; supplemental Figs. S3E, S4, available at www.jneurosci.org as supplemental material). It was also expressed transiently in S100β-positive glia (Fig. 2B; supplemental Fig. S4B,D, available at www.jneurosci.org as supplemental material). Label retaining Nestin:GFP+ cells were found in the stem cell niche (Fig. 2C). SoxB transcription factors and the RNA binding protein Musashi have been reported to be expressed in embryonic and adult neural stem cells (Kaneko et al., 2000; Graham et al., 2003). In the adult zebrafish cerebellum, Sox2 was expressed in Purkinje neurons, glia, and in a subset of the proliferating cells (Fig. 2D; supplemental Fig. S2B,C, available at www.jneurosci.org as supplemental material). Musashi1 was expressed in glia and in a subset of the proliferating cells (Fig. 2E,F). During development Meis proteins are potent regulators of cell proliferation and suppress differentiation. In the cerebellum Meis1 has been identified in proliferating progenitors in the ventricular zone (VZ) and granule cell progenitors in the EGL (Morales and Hatten 2006). By using an antibody recognizing Meis proteins we found that Meis is expressed in a subset of the proliferating progenitors, glia and Purkinje neurons (Fig. 2E,F; supplemental Fig. S2C,D, available at www.jneurosci.org as supplemental material). In sum, our data demonstrate that adult cerebellar progenitors maintain expression of the stem cell and progenitor markers Nestin, Sox2, Meis, and Musashi1. Nestin is expressed by most, if not all, cycling cerebellar progenitors whereas Sox2, Musashi1 and Meis are found in supportive glia and a subset of the proliferating progenitors.
Cerebellar stem cells maintain apical-basal polarity and are distinctly demarcated by adherens junctions
In mammals, neural progenitors display neuroepithelial properties, such as expression of the intermediate filament Nestin, and maintain apical-basal polarity features such as the apical localization of centrosomes and adherens junctions (Götz and Huttner, 2005). We found that the zebrafish cerebellar stem cell population is distinctly demarcated by adherens junctions and expresses canonical apical markers such as zona occludens protein 1 (ZO-1), β-catenin, γ-tubulin, and aPKC (Fig. 2G,H; supplemental Fig. S2E,G, available at www.jneurosci.org as supplemental material). Analysis of nestin:GFP expressing progenitors show that they are distinctly polarized (Fig. 2H). Most of the detected mitotic divisions of nestin:GFP+ cells were horizontal (n = 7, 54/57) but also divisions along the apical-basal axis were found (3/57) (supplemental Fig. S2H,I, available at www.jneurosci.org as supplemental material). Thus, the stem cells reside in a specialized niche (summarized in Fig. 5) consisting of a small pool of highly polarized cells that are demarcated by apical markers.
Different populations of glia serve as scaffolds and support in the cerebellar stem cell niche
During neural development and in the adult CNS of mammals and birds, cells with astroglial characteristics (radial glia) act as neural progenitors as well as scaffolds for cell migration (Doetsch and Scharff, 2001; Alvarez-Buylla and Lim, 2004). Two distinct populations of glia were found in the adult zebrafish cerebellum. One small population of glia with typical radial glial morphology was restricted to the very medial part of the stem cell niche (Fig. 3A). These cells are immunopositive for GFAP, vimentin, BLBP and 3CB2, but not S100β (Fig. 3A,B; supplemental Fig. S2J,K, available at www.jneurosci.org as supplemental material). Surprisingly, the GFAP/vimentin/BLBP+ radial glia did not show colocalization with proliferation markers (n = 5) (Fig. 3C; supplemental Figs. S2J,O, S4D,E, available at www.jneurosci.org as supplemental material). However, the radial processes from this distinct cell population appeared to function as scaffolds during the initial dorsal migration phase. A short pulse of BrdU or PCNA staining revealed migration of proliferating cells along GFAP/BLBP/vimentin immunopositive radial processes (Figs. 1C, 3C; supplemental Fig. S2J, available at www.jneurosci.org as supplemental material). Migrating cells were also found in close proximity to blood vessels and seemed to use them as scaffolds (Fig. 3D; supplemental Fig. S3C, available at www.jneurosci.org as supplemental material). Another population of glia that was strongly S100β+ but weakly vimentin/3CB2+ was found interspersed between the molecular and granular cell layer (Fig. 3A). This population showed gfap:GFP expression but did not stain with GFAP antibodies (supplemental Fig. S2I, available at www.jneurosci.org as supplemental material) and had less pronounced radial glia morphology (Fig. 3A). The S100β glia bordered the proliferating cells laterally (Figs. 2B, 3E). Nestin:GFP was transiently detected in S100β glia in close proximity to the progenitors (Fig. 2B; supplemental Fig. S4B,D, available at www.jneurosci.org as supplemental material). These results show that the proliferating cerebellar cells do not express canonical radial glial or astroglial markers, such as BLBP, GFAP, vimentin and S100β. However, two populations of distinct glia are associated with the cerebellar stem cell niche (summarized in Fig. 5).
Rapid proliferation and chain migration of granule cell precursors along radial glia and blood vessels
The majority of cells migrated rapidly out of the stem cell niche into the granule cell layer. A short BrdU pulse (4 h) followed by a short chase time (0–24 h) showed that the majority of proliferating cells were still confined to the molecular layer (Fig. 3E; supplemental Fig. S3A, available at www.jneurosci.org as supplemental material). In contrast, a short BrdU pulse (4 h) followed by intermediate chase times (3 d) labeled cells already present in the granular cell layer (Fig. 3F; supplemental Fig. S3A, available at www.jneurosci.org as supplemental material). After a 6 d chase period, the vast majority of cells (>95%) were confined to the granular cell layer (Fig. 1D). A combination of BrdU, PCNA, and pH3 staining showed that the cells still proliferate throughout migration (Fig. 3D,G; supplemental Fig. S3A,B, available at www.jneurosci.org as supplemental material). Initially, most of the generated cells migrated dorsally along glial processes (Fig. 3C,D) until altering course laterally just before reaching the dorsal surface (Figs. 1F, 3E). After ∼80 μm of lateral movement, the majority of cells migrated ventrally toward the granule cell layer (Fig. 3F). As the cells migrated ventrolaterally, their morphology changed from a prolonged ovoid shape to a unipolar spindle shape typical of migrating granule precursors (Fig. 3H; supplemental Fig. S3D,E, available at www.jneurosci.org as supplemental material). These spindle-shaped cells emitted processes and expressed the early neuronal marker HU-C/D (Fig. 3H; supplemental Fig. S3A,D, available at www.jneurosci.org as supplemental material). Furthermore, they expressed other neurogenic factors and proteins characteristic of differentiating granule cells, including GAP-43 and Neurod (Fig. 4E,G). However, a few cells were displaced laterally from the stem cell niche and later differentiated into glia (Figs. 2B, 4B; supplemental Fig. S4A,B, available at www.jneurosci.org as supplemental material). This data show that most cells quickly migrate out from the stem cell niche into the granule cell layer (summarized in Fig. 5). During migration, the neuroblasts express granule cell markers and use both radial and tangential migration. In contrast, cells that are displaced laterally from the stem cell niche turn into glia.
Generation of granule cells and a small number of glia
During development, different cerebellar cell types are produced in a strict temporal order from increasingly committed progenitors. To learn about the potential of adult cerebellar stem cells in zebrafish, we examined which cell types are generated in vivo. To examine the fate of the generated cells, extended BrdU pulses (2 d) and long chase experiments (4–6 weeks) were analyzed in combination with neuronal markers. Antibodies against Parvalbumin and Calretinin were used to detect Purkinje and eudendroid neurons in combination with fluorescent Nissl staining. Small sized BrdU/Nissl double-positive cells were abundant in the granule cell layer, showing that mainly granule cells are generated (Fig. 4A). This is in agreement with our previous study where BrdU and the neuronal marker HU-C/D colocalized in granule neurons (Grandel et al., 2006). Only a few cells remained in the molecular or intermediate layer after 4–6 weeks chase time (3.33 cells, SEM 0.49, n = 6). None of them colocalized with the markers or showed morphological characteristics of Purkinje or eudendroid cells. However, a low amount of BrdU/S100β-positive glia (0.83 cells, SEM 0.31, n = 6) were found in the intermediate layer lateral to the proliferating progenitor population (Fig. 4B). No BrdU/BLBP-positive radial glia were detected after a long BrdU chase (n = 3). Together, these results demonstrate that the vast majority of cells generated by the adult zebrafish cerebellar niche are granule neurons and only a small number are glia.
The adult cerebellar stem cell niche expresses rhombic lip and granule cell markers
During early vertebrate development, cerebellar neurons and glia originate from two principal germinal zones, the rhombic lip (RL) and the VZ. Excitatory granule neurons and unipolar brush cells are generated by the RL, whereas Purkinje cells, glia, and inhibitory neurons are generated from the VZ (Wingate, 2005). We found that both neurons and glia are continuously generated in the adult zebrafish cerebellum. Thus, we next wanted to know whether the adult progenitors express canonical cerebellar RL or VZ markers.
We first examined well known markers expressed early in granule progenitors, including atoh1, zic1, zic3, pax6, and meis1 (Ben-Arie et al., 1997; Nagai et al., 1997; Engelkamp et al., 1999; Morales and Hatten, 2006). The atonal1 orthologues atoh1a-b are not expressed in the adult zebrafish cerebellum (data not shown). However, the early granule cell progenitor markers zic1, zic3 and Pax6 are highly expressed in the stem cell niche and in both migrating and granule cells (Fig. 4C–F; supplemental Fig. S3F, available at www.jneurosci.org as supplemental material).
During later stages of granule cell development in vertebrates, Neurod is expressed in migrating, differentiating, and mature granule cells (Miyata et al., 1999; Mueller and Wullimann, 2002). In the adult zebrafish, Neurod is strongly expressed in the migrating cells and mature granule neurons (Fig. 4E; supplemental Fig. S3G, available at www.jneurosci.org as supplemental material). reelin is expressed in migrating granule cells during vertebrate development and in granule cells within the adult cerebellum (Pesold et al., 1998; Costagli et al., 2002). In the adult zebrafish cerebellum, reelin expression was confined to the mature granule cells (supplemental Fig. S3H, available at www.jneurosci.org as supplemental material). Growth associated protein 43 (GAP-43) is expressed in differentiating neurons and cerebellar precursors (Console-Bram et al., 1996). In the adult zebrafish, GAP-43 staining was seen in proliferating migrating cells and in the granule cells (Fig. 4G; supplemental Fig. S3I, available at www.jneurosci.org as supplemental material).
RL progenitors are the last cerebellar progenitor types generated. Therefore, we examined whether markers for earlier progenitors, i.e., cerebellar VZ progenitors, persisted into adulthood in the cerebellar progenitors. In mouse, the transcription factor Ptf1a marks progenitors of cerebellar inhibitory neurons in the VZ (Hoshino et al., 2005). ptf1a expression was absent in the adult zebrafish cerebellum (data not shown). In rodents, Pax2 identifies precursors of inhibitory neurons during cerebellar development and is later confined to Golgi neurons (Maricich and Herrup, 1999). In the adult zebrafish, Pax2-positive cells were dispersed in the intermediate cell layer (Fig. 4H). These cells are presumably mature Golgi cells since Parvalbumin (a marker of mature basket, stellate and Purkinje cells) did not colocalize with Pax2 (Fig. 4H).
Consistent with the notion that primarily granule neurons are generated, our results show that early RL and granule precursor markers, such as Pax6, Meis1, zic1, and zic3, are expressed in the adult stem cell niche. Furthermore, markers of differentiating and maturating granule neurons, such as GAP-43 and Neurod, are expressed in migrating granule cells in zebrafish. Importantly, the VZ progenitor markers ptf1a and Pax2 are not found in the adult stem cell niche.
The adult cerebellar stem cell niche is derived from displacement of the IVth ventricle and rhombic lip progenitors
So far, very little is known about how adult neural stem cell niches are created during development, and how they are maintained postembryonically. In rodents it has been proposed that a key feature of neural progenitors is the retention of direct contact with a ventricle. Cerebellar progenitors in the adult zebrafish are located very far from all known ventricles, so we hypothesized that adult cerebellar progenitors could derive from progenitors that were ventricularly located in the embryo. To dynamically trace the origin and organization of the adult cerebellar stem cell niche, we used in vivo imaging, ventricular dye injections, and analysis of key markers in embryonic and juvenile zebrafish.
We found that progenitors derive from the anterior RL and that the stem cell niche is created in two steps. The initial step is a morphogenetic process that takes place during embryonic and early juvenile stages (24 hpf–5 dpf). Similar to other vertebrates, there is a general morphogenetic 90° rotation of rhombomere 1 including the RL (Fig. 6A,B, movie 1) (Sgaier et al., 2005). In addition, medially located RL progenitors and a small part of the IVth ventricle shift rostrally to form a dorsomedial extension of the IVth ventricle (Fig. 6A,B; supplemental Fig. S5, available at www.jneurosci.org as supplemental material). This ventricular extension forms a distinct recessus from 5 dpf onwards (Fig. 6B,C, animations 2–4; supplemental Fig. S5, available at www.jneurosci.org as supplemental material). This extension of the IVth ventricle was previously unknown in teleosts, and we thus name it the cerebellar recessus (CR). The second step involves displacement of the progenitors and CR through tissue growth taking place from juvenile (5 d) to adult stages. During the growth of the cerebellum, newly generated granule neurons expand the granule layer, which in turn gradually separates the progenitors and CR from the IVth ventricle (Fig. 8B). At the same time, the stem cell niche is displaced ventrally from the roof plate because of molecular layer expansion resulting from the addition of new axons from the newly generated granule neurons (Fig. 8B). The observed displacement of the cerebellar stem cell niche suggests that even at its deep location the niche retains ventricular contact. Indeed, filling the IIIrd and IVth ventricle by dye injections in juvenile and adult fish showed that the CR still remains in contact with both ventricles (Fig. 6B, animations 2–4; supplemental Fig. S5, available at www.jneurosci.org as supplemental material).
In summary, our analysis of the origin of the cerebellar stem cell niche shows that it is generated in two steps: (1) initial morphogenetic movements, and (2) subsequent tissue growth (summarized in Fig. 8A,B). As a result, ventricularly located RL progenitors and a small portion of the IVth ventricle, the cerebellar recessus, are pinched off and displaced deep into the tissue.
Fibroblast growth factors regulate stem cell activity in the adult cerebellum
Signals propagated through the CSF in the ventricle are thought to be important regulators of stem cell activity. Growth factors such as fibroblast growth factors are found in the CSF (Johanson et al., 2008). Furthermore, Fgf signaling is crucial for midbrain and cerebellar development in vertebrates (Rhinn et al., 2006; Partanen, 2007). To test the requirements of Fgf signaling on the adult cerebellar stem cells niche, we used transgenic zebrafish with a temperature inducible dominant-negative Fgfr (hsp70:dn-fgfr1). A single heat shock uniformly induces dn-fgfr1 transgene expression and efficiently blocks Fgf signaling for at least 1 d (Lee et al., 2005). hsp70:dn-fgfr1 fish and control fish were heat induced once, and 24 h after induction, the fish received a 4 h BrdU pulse before kill. To accurately capture proliferative changes in the stem cell niche we quantified the number of BrdU+ cells in two domains of the cerebellum, the stem cell niche (domain 1) and the migratory zone where granule precursors are located (domain 2) (Fig. 7A). After a single heat induction, homozygous hsp70:dn-fgfr1 fish showed a significantly reduced number of proliferating cells in the stem cell niche (n = 4, p = 0.0224) and proliferating granule precursors (n = 4, p = 0.0464) compared with control fish (Fig. 7A). In addition, heterozygous hsp70:dn-fgfr1 fish showed a significantly reduced number of proliferating granule precursors (n = 4, p = 0.0047) compared with control fish after one heat induction (supplemental Fig. S6, available at www.jneurosci.org as supplemental material).
We then studied the expression of Fgf receptors and downstream targets of the Fgf signaling pathway. Strong expression of fgfr2 and moderate expression of fgfr3 was found in cells that were interspersed in intermediate layer of the cerebellum (Fig. 7C,D). fgfr2 was also expressed in the stem cell niche (Fig. 7C′). No expression or very low expression of fgfr1 and fgfr4 was detected in the adult cerebellum. Consistent with the fgfr receptor expression, we detected tyrosine kinase receptor activity in glia in the intermediate layer with an antibody recognizing phosphorylated ERK (Fig. 7E; supplemental Fig. S6D, available at www.jneurosci.org as supplemental material). Despite high expression of fgfr2 in the stem cell niche, we did not detect phosphorylated ERK in proliferating cells. Additionally, downstream targets of the Fgf signaling pathway were expressed in the adult cerebellum. spry2 was expressed in scattered cells in the intermediate layer whereas erm and spry4 were detected in the granule cell layer (supplemental Fig. S6B,C, available at www.jneurosci.org as supplemental material). Weak or no expression of sef, pea3, or dusp6 was detected in the adult cerebellum (data not shown). Together, these results indicate that blocking Fgf signaling significantly reduces cell proliferation in the cerebellum. Analysis of fgf receptor expression, downstream targets of the Fgf signaling pathway, and tyrosine kinase receptor activity suggests that the Fgf signaling pathway activity is primarily in glia and granule cells.
Discussion
Here, we present the architecture and origin of a previously unknown neural stem cell niche. Our work provides a starting point for further studies on how adult neural stem cell niches arise during development and how they are maintained and regulated.
Cerebellar stem cells in zebrafish retain neuroepithelial properties and ventricular contact
The microenvironment is a major regulator of stem cells in vivo (Fuchs et al., 2004). In the adult mammalian telencephalon and during development, contact to the ventricle is a critical microenvironmental requirement to keep neural stem cells active (Bittman et al., 1997; Kosodo et al., 2004; Mirzadeh et al., 2008). In the zebrafish cerebellum, we find that that a portion of the anterior RL, including its stem cells and microenvironment, persists into adulthood. The cerebellar stem cell niche is generated in two steps by morphogenetic movement and tissue growth. During embryonic and early juvenile stages, medially located RL progenitors and the IVth ventricle are shifted rostrally to form a small cerebellar dorsomedial recessus. During later juvenile stages, the RL progenitors and recessus are further separated from the IVth ventricle by growth of the granule cell layer. Importantly, molecular signals can reach the cerebellar stem cells through the CSF since the displaced ventricular space remains in contact with the IIIrd and IVth ventricle. Consistently, stem cell activity is inhibited and vanishes in the rodent cerebellar primordium once the neuroepithelium loses contact with the CSF and the IVth ventricle (Altman and Bayer, 1997). In contrast, the cerebellar stem cells in zebrafish maintain neuroepithelial properties, including Nestin expression, apical-basal polarization and contact to the IVth ventricle. Similarly, neural stem cells in the adult rodent telencephalic SVZ retain fundamental epithelial properties, such as apical-basal polarization and contact with the ventricular cavity (Mirzadeh et al., 2008). Together, this suggests that ventricular contact may be necessary for maintenance of neurogenic niches in vertebrates.
Fibroblast growth factor regulates stem cell activity in the adult cerebellum
Inhibition of Fgf signaling leads to a significant reduction of cell proliferation in the adult cerebellum. Fgf signaling is mediated through fgfr2 and fgfr3 in the cerebellum. Expression of downstream targets of the Fgf signaling pathway and tyrosine kinase receptor activity suggest that the most active Fgf signaling takes place in glia and granule cells. Although we found expression of fgfr2 in the stem cell niche, we did not detect markers for high levels of Fgf signaling activity in the proliferating cells. This is in agreement with a recent study showing that Fgf activity is not associated with stem cell activity in the adult zebrafish brain (Topp et al., 2008). However, our results clearly show that stem cell activity is reduced when Fgf signaling is blocked, suggesting that Fgf signaling is important for stem cell regulation in the adult cerebellum. Interestingly, Fgfs (fgf3, fgf8a, and fgf8b) are expressed in the adult zebrafish cerebellum (Topp et al., 2008), although only in close proximity to the ventricle and not directly at the stem cell niche. It is therefore an attractive possibility that Fgfs might propagate through the ventricle in the cerebellum.
Typical glia do not serve as stem cells in the adult zebrafish cerebellum
During development and in the adult CNS of mammals, cells with astroglial characteristics act as multipotent progenitors (Alvarez-Buylla et al., 2001). In contrast to mammals, radial glia persist in the adult CNS of nonmammalian vertebrates (García-Verdugo et al., 2002; Kálmán, 2002; Zupanc and Clint, 2003). A prevailing view is the link between persisting radial glia and pronounced neural stem cell activity in nonmammalian vertebrates (Alvarez-Buylla et al., 2001; Götz et al., 2002). However, to our surprise, the proliferating progenitors in the cerebellum do not express canonical radial or astroglial markers, such as GFAP/vimentin/3CB2/BLBP, but we did detect Nestin and other neural stem cell markers, indicating that they retain neuroepithelial rather than astroglial characteristics. We detected two populations of glia in the developing and adult zebrafish cerebellum. Based on marker expression (S100β, GFAP, vimentin) and morphology, one population of glia is likely to be equivalent to the Bergmann glia/Golgi epithelial cells of other vertebrates. Furthermore, we detected generation of S100β glia in the juvenile and adult zebrafish cerebellum. Although it seems likely that these S100β cells originated from the stem cell niche, we cannot unambiguously resolve this. The other glia type detected displays a distinct radial morphology and seems to serve as a scaffold during the initial migration of granule cells. Similarly, RC2/BLBP+ radial glia provide a migratory pathway for the initial migration of cerebellar progenitors from the ventricular zone to the dorsal surface during early stages of mouse cerebellar development (Morales and Hatten, 2006).
Zebrafish cerebellar stem cells display neural stem cell markers and characteristics of upper rhombic lip progenitors
Development of the zebrafish cerebellum follows a similar course to that observed in other vertebrates. Lineage tracing and fate map studies in zebrafish, chick and mouse have shown that extra-cerebellar and cerebellar cell types are produced in a strict temporal order with granule cells produced last (Wingate and Hatten, 1999; Köster and Fraser, 2001; Machold and Fishell, 2005; Wang et al., 2005). Cerebellar neurons and glia originate from two principal germinal zones, the upper rhombic lip (URL) and the VZ. Excitatory granule neurons and unipolar brush cells are generated by the RL whereas Purkinje cells and inhibitory neurons are generated from the VZ.
Our results show that the cerebellar progenitors in the adult zebrafish originate from the URL. In vertebrates, the URL and its progenitors represent a dynamic structure located at the interface of the alar plate and roof plate (Wang and Zoghbi, 2001; Wingate, 2001). Induction of granule cell precursors depends on neuroepithelial cell interaction with the roof plate. Neuroepithelial precursors contacting the roof plate are transformed into tangentially migrating granule precursors. These undifferentiated URL precursors display a unipolar morphology and express Math1 and Nestin (Ben-Arie et al., 1997; Wingate and Hatten, 1999; Morales and Hatten, 2006). The nature of the progenitors of the URL, which continuously replenish the supply of migrating Math1 cells, is not understood (Wingate, 2005; Wilson and Wingate, 2006). In the adult zebrafish cerebellum, we find polarized progenitors displaying neural stem cell markers, such as Nestin, Sox2, Meis, and Musashi. These progenitors have a bipolar radial morphology and remain in contact with the roof plate and ventricle. Most of the cells generated from these progenitors turn into migrating granule precursors that initially display a unipolar morphology. We did not detect expression of atoh1a or atoh1b in the adult cerebellum. However, math1 expression in mouse does not identify a spatially defined precursor pool as such, but rather temporal determination of these precursors (Wingate, 2005; Wilson and Wingate, 2006). Consistent with this, atoh1a or atoh1b expression in developing and juvenile zebrafish is detected transiently up to 7 dpf, after which it is gradually lost (data not shown).
Continuous generation of granule neurons and conserved migratory patterns in the adult zebrafish cerebellum
In mammals and birds, the granule precursors migrate from the URL and pile up over the cerebellar surface to form a highly proliferative second germinal zone, the external granule layer (EGL) (Fig. 8C). In zebrafish, the granule cells leave the germinal zone in the upper rhombic lip and migrate and differentiate ∼48 hpf (Köster and Fraser, 2001; Volkmann et al., 2008). A prominent EGL does not form during cerebellar development in zebrafish. EGL granule precursors in rodents and chick express the transcription factors math1, Zic1, Zic3, and Pax6 (Aruga et al., 1994; Lin and Cepko, 1998; Engelkamp et al., 1999). After a second wave of proliferation, the EGL precursors generate granule cells that migrate radially inwards to form the internal granule cell layer. Postmitotic granule precursors in the inner EGL express the neuronal differentiation bHLH protein Neurod (Miyata et al., 1999). Likewise, Zic1, Zic3, Pax6, and Neurod are expressed by migrating granule precursors in the adult zebrafish cerebellum. Neurod is detected in migrating nonproliferating cells in the adult zebrafish cerebellum. In addition, the migratory behavior of granule precursors in the adult zebrafish is very similar to that reported in the EGL of mammals and birds (Wang and Zoghbi, 2001; Sotelo, 2004). The subsequent tangential ventrolateral migration in zebrafish resembles the migratory behavior of GCPs in the EGL of rodents. In the EGL of rodents, GCPs first migrate tangentially in a medial to lateral direction before turning into the deep layers of the EGL where they migrate radially along Bergmann glia inwards to the IGL (Altman and Bayer, 1997). However, in zebrafish we do not detect GCP migration along radial glia in the IGL. Thus, our results show that the cerebellar stem cells give rise to precursors that express transcription factors and markers typical for granule precursors. Furthermore, our results suggest that migratory patterns are also conserved in the zebrafish cerebellum and that the scarce EGL in zebrafish is a consequence of the relative emphasis of secondary amplification.
Conclusions
In contrast to the predominant view, adult neural stem cells in the zebrafish show more neuroepithelial characteristics than glial. Nevertheless, retained epithelial properties and ventricular contact still seem to be critical determinants for maintaining neural stem cell activity in vertebrates. The adult zebrafish cerebellar stem cell niche recapitulates many of the strictly sequential events seen during granule cell development in mammals (Fig. 8C). However, in zebrafish the generation of granule cells is a dynamic life-long process. Understanding the cellular and molecular events in how stem cell niches have evolved or have been lost in different lineages of vertebrates will give valuable insight into how stem cells are maintained and regulated in the CNS.
Footnotes
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This work was supported by grants from Sigrid Juselius Foundation, Sonderforschungsbereich 655, European Union (EU) ZF-Models, and EU Endotrack. We dedicate this work to Krister Eriksson. We thank Heike Hollak and Anja Machate for excellent technical support. We thank Alexander Picker, Dorian Freudenreich, Minna-Liisa Änkö, and Laurel Rohde for comments on this manuscript. We thank Franseco Argenton and Steve Wilson for sharing reagents.
- Correspondence should be addressed to Michael Brand, Biotechnology Center and Center for Regenerative Therapies Dresden, Dresden University of Technology, Tatzberg 47, 01307 Dresden, Germany. michael.brand{at}biotec.tu-dresden.de