Abstract
Adult neurogenesis is thought to be crucial for preserving cognitive functions, which is tightly controlled by various epigenetic regulators. As the methyltransferase of histone H3K27, the role of Ezh2 in neurogenesis of adult mice and its mechanism of action are largely unknown. Here, we show that Ezh2 is expressed in actively dividing neural stem cells (NSCs)/progenitor cells as well as mature neurons, but not in quiescent NSCs in the subgranular zone. The deletion of Ezh2 in NSCs/progenitor cells results in a reduction in progenitor cell proliferation. Furthermore, we found that Ezh2 regulates progenitor cell proliferation by suppressing Pten expression and promoting the activation of Akt-mTOR. Moreover, the loss of Ezh2 in progenitor cells leads to a decrease in the number of neurons, which was observed by long-term tracing. Strikingly, conditional knockout of Ezh2 ultimately results in impairments in spatial learning and memory, contextual fear memory, and pattern separation. Our findings demonstrate the essential role of Ezh2 in the proliferation of progenitor cells, thus providing insight into the molecular mechanisms of adult neurogenesis in preserving cognitive functions.
Introduction
Adult neurogenesis is a process that includes the proliferation of neural stem/progenitor cells, the differentiation of neurons, and the integration of new neurons into the existing neural circuitry (Zhao et al., 2008). Persistent adult neurogenesis is primarily found in two neurogenic regions: the subgranular zone (SGZ) and the subventricular zone (Alvarez-Buylla and Lim, 2004). In the adult SGZ, neural stem cells (NSCs) proliferate, forming intermediate progenitor cells, which then go through several rounds of division and give rise to neuroblasts (Ma et al., 2010). The frequency of NSC division may have a large impact on the number of new neurons. For example, autonomous physical exercise, such as running, can promote NSC division and enhance the production of new neurons (van Praag et al., 2002; Suh et al., 2007; Lugert et al., 2010). As the basic process of neuron generation, adult neurogenesis plays a pivotal role in preserving cognitive functions throughout life. In fact, impaired neurogenesis in the DG of adult mice may account for defective spatial learning and memory, contextual fear memory, and pattern separation (Gheusi et al., 2000; Clelland et al., 2009).
Neurogenesis is regulated by many extracellular and intracellular molecules. As the interface between the genes and the environment, epigenetic regulation is essential for the maintenance of NSCs and the generation of functional neural cell types. For instance, Bmil, a member of the Polycomb group (PcG) protein complex, is essential for maintaining the self-renewal of NSCs through the regulation of the cell cycle inhibitor, P16 (Molofsky et al., 2003; Fasano et al., 2007). Mll1, a Trithorax group member, is essential for the epigenetic transition from neural precursors to the neuronal lineage (Lim et al., 2009). Although many histone modifiers have been reported, the roles of these components in adult neurogenesis remain poorly understood.
Enhancer of zeste homolog2 (Ezh2), a subunit of the polycomb repressive complex 2, mainly acts as a gene silencer by methylating H3K27 (Margueron et al., 2009). Cortex-specific deletion of Ezh2 at E12 disrupts cortical neurogenesis and alters the timing of cortical development (Pereira et al., 2010). Ezh2 also plays a role in pushing the NSCs toward a neuronal lineage during the development. Overexpression of Ezh2 inhibits astrocyte differentiation but promotes oligodendrocyte differentiation (Sher et al., 2008). As a candidate gene, mutations in Ezh2 cause Weaver's syndrome, which is characterized by learning disabilities and general overgrowth (Tatton-Brown et al., 2011; Gibson et al., 2012). Although Ezh2 has an important function in the central nervous system, it is largely unknown whether Ezh2 is involved in adult hippocampal neurogenesis or even spatial learning and memory.
Here, we demonstrate that Ezh2 promotes the amplification of active NSCs and progenitor cells through the Pten-Akt-mTOR signaling pathway. The deletion of Ezh2 in progenitor cells leads to the long-term decrease of neuron production in vivo. More importantly, Ezh2-null mice show impaired learning and memory ability. These results provide significant insight into the function of Ezh2 in adult neurogenesis and the effect of Ezh2 on spatial learning and memory.
Materials and Methods
Animals.
The Ezh2f/f mice (129Sv) were kindly provided from Stuart Orkin, Harvard Medical School. The Nestin-CreERT2 mice (C57BL6) were kindly provided by Amelia Eisch, University of Texas Southwestern Medical Center. The Nestin-Cre mice (C57BL6) were obtained from The Jackson Laboratory. The Ezh2 mice information is described previously (Shen et al., 2008). The Nestin-CreERT2 mice construct and other information are also described previously (Battiste et al., 2007; Lagace et al., 2007).
The Ezh2f/f mice were crossed with the Nestin-Cre mice, generating Ezh2f/+;Nestin-Cre animals, some of which were kept for further crossing with Ezh2f/f mice to generate homozygous Ezh2f/f;Nestin-Cre, which could only survive for 15–20 d after birth.
The Nestin-Cre-ERT2 and Ezh2f/f mice were crossed to generate Ezh2f/+;Nestin-CreERT2 animals. Ezh2f/+;Nestin-CreERT2 mice were further crossed with Ezh2f/f mice to obtain homozygous Ezh2f/f;Nestin-CreERT2 animals, which were used for the sequential experimental breeding. All of the animal used in the experiments were delivered in parallel and conducted littermate controls. Generally, mice were treated in the standard conditions (12 h light/dark cycle, except where indicated) and provided with clean-grade food and water. All the mice involved in procedures were in line with the Guide for the Care and Use of Laboratory Animals. All animal experiments and protocols were approved by the Animal Committee of Institute of Zoology, Chinese Academy of Sciences.
Mouse adult NSC cultures.
The mouse adult NSC/progenitor cell isolation was according to the protocol described previously (Guo et al., 2012). Briefly, mouse brains were obtained by cervical dislocation and dissected to remove the brainstem, cerebellum, and olfactory bulbs. Brain was finely cut into five sections, and tissue involving NSCs/progenitor cells was harvested and digested in papain (Worthington) dissolved in Hibernate media for 30 min at 37°C and mechanically dissociated by pipetting tips up and down. Then NSCs/progenitor cells were purified by washing the mixture in the high-glucose DMEM (Gibco) for 5 min three times, 1100 rpm, and in the aNSC self-renewal/proliferation culture medium (containing DMEM/F12, Neurobasal medium, B27, GlutaMAX, and non-necessary amino acid) for 5 min two times, 1100 rpm, and plated in the nontreated cell culture 6-well plate (Jet Biofile).
The proliferation media consisted of Neurobasal A medium/DMEM/F12 (Invitrogen) with penicillin-streptomycin-glutamine (Invitrogen), GlutaMAX (0.5%; Invitrogen) and Nonessential amino acid (1%; Invitrogen), B27 supplement (2%; Invitrogen), bFGF (10 ng/ml; Invitrogen), and EGF (10 ng/ml; Invitrogen).The differentiation media was made up of low glucose DMEM (Gibco) with penicillin-streptomycin-glutamine, 2% B27 supplement, and 1% fetal bovine serum (Invitrogen). Cells were incubated at 37°C in 5% CO2 and 20% oxygen at 95% humidity. For the cell proliferation, the medium was changed semivolume every other day for 7 d until neurospheres were observed.
The dissociated cells were obtained by digesting the adult NSC/progenitor cell spheres originating from the above primary cells with Accutase (Gibco), and then the aNSCs were planted at a density of 50,000 cells/ml onto acid-treated glass coverslips (Deckglaser), 48-well plates (200 μl/well; Corning), 24-well plates (400 μl/well; Corning), or 6-well plates (2 ml/well; Corning) in self-renewal/proliferation media for the sequential experiments. All of the above glass coverslips (Deckglaser) and plates (Corning) were coated with poly-l-ornithine (10 μg/ml; Sigma) and laminine (5 μg/ml; Sigma).
Reagents.
The following primary antibodies and dilutions were used for immunohistochemistry (IHC) staining and Western blotting: mouse monoclonal anti-BrdU (1:1000; Millipore), rat monoclonal anti-BrdU (1:1000; Abcam), rabbit monoclonal anti-Ki67(1:1000;Abcam), mouse monoclonal anti-Ezh2 (1:100; Abgent), rabbit monoclonal anti-Ezh2 (1:1000; Cell Signaling Technology), mouse monoclonal anti-Nestin (1:200; Millipore), mouse monoclonal anti-GFAP (1:1000; Millipore), mouse monoclonal anti-SOX2 (1:500; RD), rabbit monoclonal anti-SOX2 (1:250; Millipore), mouse monoclonal anti-NeuN (1:200; Millipore), rabbit monoclonal anti-Pten (1:1000; Cell Signaling Technology), goat polyclonal anti-DCX (1:200; Santa Cruz Biotechnology), mouse monoclonal anti-β-actin (1:2000; Proteintech), rabbit monoclonal anti-Akt (1:1000; Cell Signaling Technology), rabbit monoclonal anti-phospho-Akt (1:1000; Cell Signaling Technology), rabbit monoclonal anti-mTOR (1:1000; Cell Signaling Technology), rabbit monoclonal anti-phospho-mTOR (1:1000; Cell Signaling Technology), rabbit monoclonal anti-H3 (1:4000; Cell Signaling Technology), and rabbit polyclonal anti-trimethyl-Histone H3 (Lys27; 1:2000; Cell Signaling Technology).
Tamoxifen and BrdU administration.
To activate Cre-mediated recombination, tamoxifen (TAM; Sigma-Aldrich) was used, which was made fresh daily and dissolved in sunflower oil solution (Sigma-Aldrich). Five-week-old mice were administered 30 mg/kg prewarmed TAM daily intraperitoneally for 5 consecutive days. Five days later, mice were injected with 50 mg/kg BrdU (Sigma-Aldrich) intraperitoneally seven times (once every 2 h) in 1 d and were killed 1week or 3 weeks later to identify BrdU-positive adult-born cells.
Immunocytochemistry on cultured cells.
Cultured cells were washed with PBS (Invitrogen), fixed in 4% PFA, blocked in 5% BSA (in 0.1% PBST; Sangon), incubated with primary antibodies overnight at 4°C, and visualized with secondary antibodies.
IHC on mouse brain sections.
Mice were anesthetized via pentobarbital sodium intraperitoneally, perfused intracardially with ice-cold solutions of 10 ml of 0.9% physiological saline, and then followed by 10 ml of 4% PFA in PBS. Brains were gained and fixed in 4% PFA for 24 h at 4°C, after that in 30% sucrose/4% PFA overnight at 4°C, and then followed by 30% (w/v) sucrose in PBS at 4°C until brains sunk. Brains were embedded in Tissue-Tek (Sakura) at −20°C until IHC. Coronal sections (40 μm) were harvested using a freezing microtome (Leica CM1950). IHC was done on 40-μm-thick coronal brain sections, via a free-floating antibody staining method. Briefly, brain sections were washed once with 0.1 m PBS, pH 7.4, fixed by 4% PFA, and washed by PBST (0.1% Triton X-100 in 0.1 m PBS) for 15 min three times. Brain slices were incubated in blocking buffer (5% BSA in 1% PBST) for 1 h at room temperature. Alternately, when IHC was required for BrdU visualization, brain sections were washed using PBST for 15 min three times. Sequentially, sections were subjected to HCl treatment, incubated in ice-cold 1 N HCl for 10 min, in 2 N HCl for 10 min at room temperature, and in 2 N HCl for 40 min at 37°C. After finishing the above steps, PBST was used to wash the sections. Blocking was processed as stated above. Brain slices were incubated in primary antibodies overnight at 4°C. Brain sections were then washed in PBST for 15 min three times followed by secondary antibodies conjugated with Alexa Fluor dyes (1:1000 dilution; Jackson ImmunoResearch) in PBST buffer for 1 h at room temperature on a platform shaker. Brain sections were washed three times for 15 min in PBST, incubated with 2 μg/ml DAPI for 2 min, and washed three times for 5 min with PBST. Unless otherwise stated, all of the IHC procedures used in the experiment were delivered at room temperature. Brain sections were then mounted on adhesion microscope slides (Pan et al., 2012).
Confocal imaging.
All images were captured with a Zeiss 780 laser scanning confocal microscope.
Western blotting.
Adult NSCs and tissue protein extracts were obtained by lysing NSCs/tissue in RIPA (Solarbio) buffer (add PMSF, 10 mm; mixture, 10 mm). Thirty micrograms of proteins (in 4 × loading buffer) was added into SDS-PAGE gels (6–15%; Bio-Rad) and transferred onto nitrocellulose or polyvinylidene difluoride (PVDF) membranes. The membranes were incubated with primary antibodies and the primary antibody was visualized using IRDye 800CW or 680CW (LI-COR) donkey anti-mouse or anti-rabbit secondary antibodies.
RT-PCR analysis.
Expression of mouse cell proliferation-associated gene transcripts was detected by total RNA reverse transcription followed by PCR analysis. The total RNA was extracted from the primary NSCs using RNA simple Total RNA Kit (Tiangen) according to the manufacturer's instructions. The first-strand cDNA synthesis was performed with FastQuant RT Kit (with DNase; Tiangen). According to the descriptions (Stambolic et al., 1998; Tetsu and McCormick, 1999; O'Carroll et al., 2001; Kausch et al., 2003; Mangi et al., 2003) and primer bank, the sequences of primers used are as follows: Cyclin D1 (Forward: 5′-TAGGCCCTCAGCCTCACTC-3′; Reverse: 5′-CCACCCCTGGGATAAAGCAC-3′), EED (Forward: 5′-ATGCTGTCAGTATTGAGAGTGGC-3′; Reverse: 5′- GAGGCTGTTCACACATTTGAAAG–3′), Ezh1 (Forward: 5′-TGAAATCTGAGTATATGCGGC-3′; Reverse: 5′-AGATATCCTGGCTGTCGAAC-3′), Ezh2 (Forward: 5′-GCCAGACTGGGAAGAAATCTG-3′; Reverse: 5′-TGTGCTGGAAAATCCAAG-3′), Ki67 (Forward: 5′-CTTTGGGTGCGACTTGACG-3′; Reverse: 5′-GTCGACCCCGCTCCTTTT-3′), Pten (Forward: 5′-GGATCCGACATGACAGCCATCATCAAAG-3′; Reverse: 5′-CTCGAGTCAGACTTTTGTAATTTGTGAATGCTG-3′), Akt (Forward: 5′-AACGGACTTCGGGCTGTG-3′; Reverse: 5′-TTGTCCTCCAGCACCTCAGG-3′), β-actin (Forward: 5′-GGTGGGAATGGGTCAGAAGG-3′; Reverse: 5′-AGGAAGAGGATGCGCCAGTG-3′).
Cell cycle analysis by flow cytometry.
Adult NSCs infected by the virus were harvested and fixed with 70% ethanol for 12 h at 4°C. Analysis of the cell cycle phases was performed with propidium iodide (50 μg/ml, containing 100 μg/ml RNase A) staining and analyzed by FACSCalibur cytometer (Becton Dickinson) according to the manufacturer's instructions (Liu et al., 2010; Mira et al., 2010).
Stereotaxic gene delivery in the mouse brain.
Briefly, retroviral DNA was transfected into Plat-GP cells with the packaging plasmids pCMV-Vsvg mediated by GenEscort I (Wisegen). The medium with retrovirus was harvested at 24, 48, and 72 h post-transfection, centrifuged at 3000 rpm for 5 min to get rid of cell debris, and concentrated using Retro-Concentin virus Precipitation Solution (SBI). Retroviral injections in vivo were conducted by methods described previously (Zhao et al., 2006; Smrt et al., 2007; Liu et al., 2010). Briefly, 6-week-old Ezh2f/f male mice were anesthetized with pentobarbital sodium and concentrated virus (∼1 μl with titer ≥ 5 × 105/μl) was injected stereotaxically into the SGZ of hippocampus with the following coordinates relative to bregma: anteroposterior, 2.0 mm; lateral, 1.5 mm; depth, 2.25 mm. For each mouse, the control virus was injected stereotaxically into the left SGZ, and the Cre virus was injected into the right SGZ. Five days after virus injection, mice were administrated BrdU (50 mg/kg, i.p.) for a total of seven times in one day (once every 2 h). One week after viral grafting, mice were given deep anesthetization with pentobarbital sodium and then killed as described previously (Cetin et al., 2006; Liu et al., 2010; Mira et al., 2010).
Chromatin immunoprecipitation.
In this study, H3K27me3 antibody was used for chromatin immunoprecipitation (ChIP) assay. Cells were treated with 1% formaldehyde at room temperature for 15 min and then 2.5 m glycine added to stop the reaction. After rinsing three times with cold PBS, cells were harvested in lysis buffer 1 (50 mm HEPES-KOH, pH 7.5, 140 mm NaCl, 1 mm EDTA, 10% glycerol, 0.5% NP-40, 0.25% Triton, Roche protease inhibitor cocktail, and 1 mm PMSF), and then resuspended in lysis buffer 2 (10 mm Tris-HCl, pH 8.0, 200 mm NaCl, 1 mm EDTA, 0.5 mm EGTA, Roche protease inhibitor cocktail, and 1 mm PMSF). After centrifugation, each sample was resuspended and sonicated in lysis buffer 3 (10 mm Tris-HCl, pH 8.0, 100 mm NaCl, 1 mm EDTA, 0.5 mm EGTA, 0.1% sodium deoxycholate, 0.5% N-lauroylsarcosine, Roche protease inhibitor cocktail, and 1 mm PMSF). Lysates were incubated with 50 μl of Dynabeads Protein A (Invitrogen) preloaded with 1 μg H3K27me3 antibody overnight at 4°C. After washing five times with wash buffer (50 mm HEPES-KOH, pH7.5, 500 mm LiCl, 1 mm EDTA, 1% NP-40, and 0.7% sodium deoxycholate), Dynabeads Protein A was heated at 65°C to reverse the covalent histone-DNA bonds. DNA was extracted by DNA Gel Extraction Kit and used for real-time PCR. Primers used in real-time PCR were as follows: Pten coding sequence: forward: TGTGGTCTGCCAGCTAAAGT; reverse: ACATGAACTTGTCCTCCCGC (Yoshimi et al., 2011); Pten promoter: forward: TGACTACTATCCTCCGGATTTCTAA; reverse: TGAGCCCTAAAGTATCTCTGAGTTG (Feng et al., 2013).
Open-field test and habituation.
The open-field apparatus, a wooden square box (90 cm × 90 cm) with a 45 cm high wall, was used to analyze the locomotor activity and anxiety level. Prehabituation was not done in the arena. Ezh2f/f;Nestin-CreERT2 mice were individually put into the center of the arena with the Photo Beam Tracking System and allowed to explore the box freely for 15 min. Meanwhile, the distance traveled (meters), time spent in the center (seconds), and time spent in the periphery (seconds) were recorded (Pan et al., 2012; Soares et al., 2013). Data were collected and analyzed using SMART v2.5.21 software (Panlab; Harvard Apparatus).
Morris water maze assay.
The procedure was instructed by previously described protocols (Vorhees and Williams, 2006; Zhang et al., 2008a, b). Ezh2f/f;Nestin-CreERT2 mice given 5 consecutive days of TAM or vehicle treatment were delivered to the Morris water maze to estimate their spatial learning and memory ability. Morris maze for mice contains two parts: a circular tank (120 cm in diameter, 25 cm in depth) and an escape platform (10 cm in diameter), a kind of hyaline Plexiglas settled in a stable location for the entire training session. Target escape platform is usually submerged 1 cm lower than the surface of the opaque water. Nontoxic titanium dioxide white paint was used to make the water opaque so that the platform is hidden. Water temperature was controlled at 21 ± 1°C throughout the entire training and testing procedures. Four extra-maze cues, in different shapes, colors, and sizes, were uniformly located on the wall surrounding the water tank. During the probe trial, mice were trained in four trials (60 s per trail) per day starting from different sites. Signal mouse was gently released into one of the desired zones without the platform, facing the tank wall, and allowed to swim for 60 s to spot the escape platform. Mice that failed to find the hidden platform during the 60 s were introduced gently to the hidden platform and allowed to rest on the platform for 15 s. On subsequent days, the trials were repeated for 8 consecutive days. During the training session, a total of 32 trials were delivered (four trials per day for 8 d).
For the probe test, the platform was removed and the probe trail was conducted 24 h after the last training trial. The animal was put into a novel start site, facing the tub wall opposite the original platform location.
Reversal training followed after the probe trials for a total of 24 trials (four trials per day for 6 d), in which the platform was relocated to the opposite zone and another set of 24 trials (four trials per day for 6 d) was performed. Reversal probe test was administered 24 h after the last trial of reversal training. Later, a visible platform test was done, in which a visible platform was relocated above the water surface in a new quadrant not including the original or reversal zone. Mice were allowed to swim to search for the visible platform. A video tracking system (SMART Video Tracking System) was used to record the number of times a mouse crossed the original location of the platform, the distance traveled, latency to locate the hidden platform, and swimming speed. All data were analyzed using SMART v2.5.21 software (Panlab; Harvard Apparatus; Kohman et al., 2013).
Cued and contextual fear conditioning.
This procedure was performed based on previously published protocols (Graves et al., 2003; Pollak et al., 2010; Guo et al., 2011; Pan et al., 2012). Briefly, mice were placed in a 25 × 25 × 40 cm (height) square-shaped apparatus, equipped with a metal grid shock floor (Panlab; Harvard Apparatus). Before the formal experiment, mice were carried into the training room to habituate the environment for 7 d.
Training.
A single mouse was placed in the training context (with solid black wall) and allowed to explore freely for 2 min, followed by conditioned stimulus (CS)–a 90 dB tone–which lasted for 30 s. At the final 2 s of CS, an unconditioned stimulus (US)–a 0.7 mA footshock–was delivered. The CS and US were presented automatically with a tone generator and shocker managed by SMART v2.5.21 software (Panlab; Harvard Apparatus). Mice were then carried back to the home cages.
Testing.
Twenty-four hours after training, mice performed both contextual fear-conditioning and cued tests. For the contextual fear-conditioning test, a single mouse was placed in the original contextual arena without footshock, lasting for 2 min. After 2 h of the contextual test, the cued test was performed. A single mouse was placed in a new context (with white wallpaper) and permitted to explore freely for 2 min. Then the CS (tone) was delivered lasting for 2 min. Freezing behavior was recorded by SMART v2.5.21 software for the two tests. Data were collected and analyzed by SMART v2.5.21 software. Seventy percent ethanol was used to clean the apparatus to eliminate the odor between each mouse.
Pattern separation assay.
Pattern separation assay was conducted according to the previously published method (Guo et al., 2011; Sebastian et al., 2013) with minor changes. The experiment was performed using the eight-arm radial maze, which was made up of an octagonal-formed center zone (20 cm in diameter, 15 cm in height) and eight arms [(30 × 5 × 15 cm (height)], sticking out of the center arena. The arms are made of white medical organic material. Before the assay, mice were given a calorie-restricted diet for 4 d to decrease mice weight to 85–90%. Four trials per day for 5 consecutive days and test sessions were performed on the last day of training. A 30 min interval was performed between each trail constituted with a training phase and a choice phase. In the training phase, blocking six of the eight arms, leaving the sample arm and start arm open, and 90° rotating were performed. Bait cheese was located at the end of the sample arm or test arm. Calorie-restricted mice were put in the maze, facing the wall of the start arm end, and were allowed to explore freely for 3 min, so that they could make a choice in the maze and were given 60 s to eat before being carried to their home cage. Mice that failed to find the bait during the 3 min were conducted to the sample arm and permitted to eat for 60 s on the first 2 d. On the sequential 3 d, mice that made an incorrect choice were removed immediately from the maze and were not allowed access to bait. Within 3 min, a test arm entering was scored as a correct choice, and a sample arm entering or a start arm re-entering was scored as an incorrect choice. After each phase, the maze was rotated 45°, cleaned with 75% ethanol to eliminate the odor reference, and then the choice phase test was performed consecutively. In this phase, opening the new sample and start arms and blocking the original one were performed, keeping the relative location of the arms unchanged in the training phase. Additionally, a test arm was defined as either one arm (separation 2) or three arms (separation 4) from the new sample one. Each mouse was conducted to the separation 2 or separation 4 tests each day. During the choice phase, correct or incorrect choices were scored manually.
Statistical analysis.
Statistical analyses between two groups were performed by Student's t test. All of the data were mean ± SEM. Probabilities of p < 0.05 were considered as significant (n.s., not significant, p ≥ 0.05; *p ≤ 0.05; **p ≤ 0.01; ***p ≤ 0.001). The behavioral data were analyzed by one-way ANOVA.
Results
Ezh2 is expressed in neural progenitor cells as well as in mature neurons in the hippocampus
To investigate the expression of Ezh2 in the SGZ, brain sections of adult mice were stained. We found that Ezh2 was expressed in the DG of the hippocampus (Fig. 1A). To determine whether Ezh2 is expressed in the progenitor cells, coimmunostaining of Ezh2 with Sox2 or Nestin was performed. Results show that Ezh2 is expressed in Sox2-positive cells and Nestin-positive cells in the SGZ (Fig. 1B,C). Moreover, Ezh2 immunoreactivity was detected not only in NeuN-positive cells but also in a subset of NeuN-negative cells (Fig. 1D). These results indicate that Ezh2 is expressed in neural progenitor cells, as well as in mature neurons in the hippocampus.
To confirm the expression of Ezh2 in vitro, adult NSCs/progenitor cells isolated from the SGZ were cultured into neurospheres. Immunostaining assays revealed that Ezh2 is also expressed in neurospheres and dissociated NSCs/progenitors (Fig. 1E). Consistent with the findings in vivo, Ezh2 is coexpressed with Sox2 or Nestin (Fig. 1F,G).
To assess the expression level of Ezh2 in NSCs/progenitors, differentiated progenies in vitro were used for comparison. Western blot results suggested that the expression of Ezh2 is higher in NSCs/progenitors than in differentiated progenies, which were cultured in differentiation conditions for 1–6 d (Fig. 1H).
Ezh2 is expressed in active NSCs/progenitor cells, but not in quiescent NSCs
To identify the Ezh2-expressing cell population in NSCs/progenitor cells, we performed coimmunostaining of Ezh2 with various cellular markers. NSCs in the DG express both GFAP and Sox2, with radial fibers spanning the granule cell layer. Significantly, Ezh2 was not detected in the vast majority of NSCs (GFAP+ Sox2+ radial fiber+ cells; Fig. 2A). Consistent expression patterns were observed in the NSCs/progenitor cells cultured in vitro (Fig. 2B). Meanwhile, Ezh2 immunoreactivity was detected in GFAP+MCM2+ NSCs and GFAP−MCM2+ progenitor cells, but not in GFAP+MCM2− NSCs (Fig. 2C). In addition, most Tbr2-positive cells expressed Ezh2 (Fig. 2D), demonstrating that Ezh2 was expressed in transit amplifying intermediate progenitor cells. All above data indicated that Ezh2 was expressed in active NSCs/progenitor cells, but not in quiescent NSCs. To detect the expression of Ezh2 in neuroblasts and immature neurons (Lie et al., 2005), we performed costaining of Ezh2, Ki67, and DCX. Ezh2 immunoreactivity was more intense in DCX+ Ki67+ cells than in DCX+Ki67− cells, indicating the higher expression of Ezh2 in neuroblasts than in immature neurons (Fig. 2E). Because Ezh2 was expressed in most active progenitor cells, we next analyzed the expression of Ezh2 in proliferating cells by staining cells for Ezh2 and BrdU, a proliferation marker. In the SGZ, Ezh2 was colabeled with BrdU in most of the cells, indicating that Ezh2 was expressed in most fast-dividing cells (Fig. 2F). In support of this result, we observed that Ezh2 was coexpressed with Ki67 or colabeled with BrdU in neurospheres (Fig. 2G,H).
Collectively, the above results indicate that Ezh2 is preferentially expressed in active progenitor cells but not in quiescent NSCs in the SGZ. This expression pattern of Ezh2 suggests that Ezh2 may regulate the process of adult neurogenesis, including aNSC proliferation, lineage commitment, and differentiation. It exhibited that Ezh2 decreased in differentiated progenies and then reappeared in mature neurons (Figs. 1D, Fig. 2E). Significantly, Ezh2 was detected in proliferating progenitor cells, indicating a potential role of Ezh2 in regulating the proliferation of progenitor cells.
Ezh2 regulates the proliferation of progenitor cells in vitro
Given the expression of Ezh2 in progenitor cells, we then explored the direct roles of Ezh2 in progenitor cell proliferation and differentiation by infecting primary NSCs/progenitor cells with recombinant retroviruses expressing Ezh2 or Ezh2-shRNA. Western blot analysis confirmed that the expression of Ezh2 was significantly higher in the retrovirus-Ezh2-overexpression-infected group compared with the control. Meanwhile, Ezh2 expression was significantly lower in the progenitor cells infected with the retrovirus-Ezh2-shRNA than in the controls (Fig. 3A). Using these viruses, we performed proliferation and differentiation assays in vitro. Adult progenitor cells infected with retrovirus-Ezh2-overexpreesion showed increased proliferation, whereas progenitor cells infected with retrovirus-Ezh2-shRNA showed reduced proliferation (Fig. 3B,C). Consistent with the above findings, Ezh2 overexpression increased the cell cycle entry of progenitor cells (Ki67+), whereas Ezh2 knockdown decreased the cell cycle entry of progenitor cells. Of note, there was no significant difference in the levels of apoptosis between the groups, demonstrating that cell death was not a major consequence of Ezh2 overexpression or knockdown (data not shown). Moreover, the function of Ezh2 in progenitor cell proliferation was further confirmed using the neurosphere assay. Adult progenitor cells infected with retrovirus-Ezh2-overexpression formed larger neurospheres than the control cells, whereas Ezh2-depleted progenitor cells formed smaller neurospheres (Fig. 3D,E). The in vitro data suggest that Ezh2 knockdown decreases progenitor cell proliferation.
To further confirm the role of Ezh2 in adult progenitor cell proliferation, NSCs/ progenitor cells isolated from Ezh2f/f mice were infected with a retrovirus that expressed Cre recombinase. Ezh2 was deleted in the retrovirus Cre-infected progenitor cells, as shown by Western blot analysis (Fig. 3F). Consistent with the knockdown results, the inactivation of Ezh2 reduced the proliferation of the adult progenitor cells (Fig. 3G,H). Moreover, there was significant difference in the proportion of cells in the G0/G1 phase between the retrovirus Cre-infected adult progenitor cells and the control cells (Fig. 3I,J), indicating that the deletion of Ezh2 led to decreased adult progenitor cell proliferation. Thus, Ezh2 may promote the entry of progenitor cells into the cell cycle, leading to the amplification of the progenitor cells.
Ezh2 alters the proliferation of progenitor cells in vivo
To examine the role of Ezh2 in progenitor cells in vivo, Ezh2−/− mice were generated by breeding Nestin-Cre mice with Ezh2f/f mice. Although Ezh2f/f;Nestin-Cre mice were similar to their littermate controls in outward appearance, these mice showed progressive growth retardation and usually died at P15–P20. Therefore, experiments using the Ezh2f/f;Nestin-Cre mice and control mice were performed at approximately P20. As expected, Ezh2 was totally ablated in the brains of these mice. Simultaneously, brains from Ezh2f/f;Nestin-Cre mice were significantly lighter than brains of the littermate controls (data not shown). Consistent with this result, fewer and smaller neurospheres were formed from Ezh2f/f;Nestin-Cre mice than from Ezh2f/f littermates (Fig. 4A,B), indicating that Ezh2 is an essential regulator of progenitor cell proliferation in vivo.
Because the survival of Ezh2f/f;Nestin-Cre homozygous knock-out mice growing into adulthood was rare, Ezh2f/+;Nestin-Cre heterozygous mice were used for further analysis of the proliferation defects revealed by the reduction in neurosphere size. As expected, the expression of Ezh2 was reduced, but the survival of the Ezh2f/+;Nestin-Cre mice was not affected. Similarly, brains isolated from the Ezh2f/+;Nestin-Cre mice were also lighter than those from the controls. The neurospheres formed from Ezh2f/+;Nestin-Cre mice were also fewer and smaller than those from controls (Fig. 4C,D). Using the BrdU tracing approach, as shown in Figure 4E, we counted the BrdU-positive cells in the DG. Compared with Ezh2f/f mice, BrdU incorporation was significantly decreased in Ezh2f/+;Nestin-Cre mice, indicating that the reduction in Ezh2 expression suppressed the proliferation of progenitor cells (Fig. 4E,F). Together, these results indicate that Ezh2 is an important regulator of progenitor cell proliferation, and loss of Ezh2 may impair the amplification of progenitor cells.
Because Ezh2 is specifically and constitutively deleted in Ezh2f/+;Nestin-Cre (icKO) mice, it is difficult to distinguish whether Ezh2 plays roles in the adult or in the embryo. To further address this question, conditional deletion mice were produced by crossing Nestin-CreERT2 mice with Ezh2f/f mice. The 5-week-old Ezh2f/f; Nestin-CreERT2 mice were administered tamoxifen for 5 consecutive days and injected with BrdU 5 d later. The number of BrdU-positive cells was significantly reduced in the Ezh2 icKO mice (Fig. 4G,H; ∼3-fold decrease compared with tamoxifen-treated control). In support of these findings, NSCs/progenitors from adult Ezh2 icKO mice formed primary and secondary neurospheres at a significantly lower frequency and with a smaller size than those from the littermate controls, suggesting Ezh2 plays an essential role in progenitor cell proliferation (Fig. 4I,J).
To directly investigate the role of Ezh2 in proliferation, recombinant retroviruses expressing Cre recombinase were stereotaxically injected into the right DG of Ezh2f/f mice. Because retroviruses only infect dividing cells, we can specifically ablate the expression of Ezh2 in the dividing cells. BrdU tracing was performed 5 d after retrovirus injection. Consistent with the icKO mice, BrdU-labeled cells were significantly decreased compared with controls (Fig. 4K,L), indicating the important role of Ezh2 in the proliferation of progenitor cells.
Ezh2 regulates adult neurogenesis by targeting the Pten-Akt-mTOR signaling pathway
The above-mentioned results suggest that Ezh2 is important for progenitor proliferation. To shed light on its mechanism of action, we examined the impact of Ezh2 on several canonical proliferation pathways. As Ezh2 can trimethylate lysine 27 of histone H3 and lead to the silence of target genes, we first detected the levels of H3K27me3 by Western blot analysis. As expected, the level of H3K27me3 was upregulated when Ezh2 was overexpressed, whereas the level of H3K27me3 was downregulated when Ezh2 was knocked down (Fig. 5A,C). These results demonstrate that Ezh2 works as an epigenetic regulator. Further analysis showed that Pten (phosphatase and tensin homolog) was downregulated by Ezh2. Knockdown of Ezh2 in the progenitor cells led to Pten expression increase, whereas overexpression of Ezh2 led to a reduction in Pten expression. Simultaneously, p-Akt and p-mTOR were decreased in the Ezh2 knockdown group and increased in Ezh2 overexpressed group, indicating that Ezh2 is involved in the Akt-mTOR signaling pathway by suppressing Pten (Fig. 5A,C).
To further verify that Ezh2 affects the Akt/mTOR signaling pathway, progenitor cells isolated from Ezh2f/f mice were infected with retrovirus expressing Cre recombinase to ablate the expression of Ezh2. Similarly, the loss of Ezh2 resulted in the upregulation of Pten and the downregulation of p-Akt and p-mTOR (Fig. 5B). Moreover, immunostaining results showed an increase in Pten expression and a decrease in p-AKT in the Ezh2 ablated cells (Fig. 5D–F). Meanwhile, RT-PCR results further supported this conclusion (data not shown). To detect the effect of Ezh2 on Pten-AKT-mTOR signaling pathway in vivo, H3K27me3, Pten, p-AKT, and p-mTOR staining were performed in brain sections of retrovirus Cre-infected Ezh2f/f mice. Consistently, H3K27me3 immunoreactivity was reduced, whereas the expression of Pten was increased after Ezh2 was deleted (Fig. 5G). Similarly, the immunoreactivity of p-AKT and p-mTOR was also reduced in retrovirus-infected cells (Fig. 5H,I). Importantly, ChIP assays showed that Ezh2 inhibited Pten expression by promoting H3K27 methylation at the promoter of the Pten gene (Fig. 5J), whereas promoters of the Dlx2 and P21 genes, which are required for neurogenesis and cell cycle progression, were not altered (data not shown). Therefore, our results further confirmed the role of Ezh2 in the Akt-mTOR signaling pathway.
To test whether Ezh2 regulates progenitor proliferation through the Akt-mTOR signaling pathway, primary progenitor cells were coinfected with recombinant lentivirus expressing Pten-shRNA and retrovirus expressing Ezh2-shRNA. Western blot analysis showed that Pten knockdown can rescue the levels of p-AKT and p-mTOR when Ezh2 was knocked down (Fig. 5K). Proliferation capability of the cells was analyzed by EdU labeling. As expected, the rate of EdU incorporation in the Pten and Ezh2 double knockdown progenitor cells was similar to control cells and was significantly higher than in the Ezh2 knockdown progenitors (Fig. 5L,M). These results indicated that Pten knockdown could completely rescue the reduced proliferation caused by Ezh2 knockdown. To investigate whether Ezh2 regulates progenitor cell proliferation through the downstream target, p-mTOR, primary NSCs/progenitor cells were infected with retrovirus-Ezh2-overexpression and then treated with rapamycin, an inhibitor of mTOR. Importantly, the inhibition of p-mTOR significantly decreased the number of EdU-positive cells in the Ezh2-overexpressing progenitor cells, suggesting that the inhibition of mTOR was able to rescue the increased proliferation caused by Ezh2-overexpression (Fig. 5N,O). To detect the rescue efficiency of Pten knockdown, viruses that express Cre recombinase/GFP or Pten-shRNA/mCherry were mixed and injected stereotaxically into the DG of Ezh2f/f mice. BrdU-positive cells were quantified in GFP and mCherry colabeled cells. Compared with control, the percentage of proliferating cells was significantly increased in Cre and Pten-shRNA coexpressing progenitor cells (Fig. 5P,Q).Together, these results suggest that Ezh2 regulates progenitor cell proliferation through the Pten-Akt-mTOR signaling pathway.
Conditional deletion of Ezh2 inhibits neurogenesis in adult mice
Whether the deficient progenitor cell proliferation caused by Ezh2 deletion impaired the neurogenesis in the adult hippocampus is unknown. To test this possibility, the mice were analyzed 3 weeks after the last BrdU injection to detect the long-term effect of Ezh2 deletion in adult neurogenesis. We found a marked reduction in the number of BrdU-positive cells in the Ezh2 icKO mice. However, there were no significant differences between Ezh2f/f mice treated with tamoxifen and those treated with vehicle in the number of BrdU-positive cells. These results suggest that Ezh2 deletion has a long-term effect on neurogenesis (Fig. 6A,E). Simultaneously, we also observed a significant decrease in the number of NeuN and BrdU double-labeled cells in the Ezh2 icKO mice (Fig. 6A,F), indicating that the loss of Ezh2 also had a long-term effect on neuronal differentiation. Moreover, the immature neurons labeled with DCX were also reduced in both the short- and long-term tracing in the Ezh2 icKO mice (Fig. 6B–D), suggesting the deficiency of progenitor cell proliferation also impaired the production of new neurons. Together, these results indicate that Ezh2 is essential for progenitor cell proliferation and neuronal differentiation in adult brains.
Conditional deletion of Ezh2 impairs spatial learning and memory
The important function of the hippocampus in learning and memory is well known (Zhang et al., 2008a; Guo et al., 2011). To test whether the loss of Ezh2 affects spatial learning and memory, adult Ezh2f/f;Nestin-CreERTM2 mice, as well as their littermate controls, were examined by the Morris water maze experiment 4 weeks after 5 d of consecutive tamoxifen treatment (Fig. 7A). There was no significant difference in the swim distance between the Ezh2 icKO mice and the controls during the eight training days (Fig. 7B). There was also no significant difference in the probe trial 24 h after the training (Fig. 7C; one-way ANOVA, F(1,14) = 0.291, p = 0.598).
To further explore whether spatial learning and memory are affected by Ezh2 in a more complex condition, reversal training was performed by moving the hidden platform to the opposite quadrant. In this experiment, the mice must forget the old location of the hidden platform and learn to search for it in a new location. Interestingly, the Ezh2 icKO mice showed significant delays in learning after the third day of reversal training (Fig. 7D), indicating their inability to associate a previous experience with a new location. The reversal probe test was performed 24 h after the last training. As expected, the Ezh2 icKO mice spent less time in the target quadrant than the control mice. Moreover, the Ezh2 icKO mice spent more time in the old target quadrant than in the new one, whereas the control group showed an opposite result (Fig. 7E). In line with these data, both the time spent in the target platform zone (Fig. 7G; F(1,14) = 5.327, p = 0.041) and the times of platform crossing (Fig. 7H; F(1,14) = 6.215, p = 0.032) were significantly decreased in the Ezh2 icKO group compared with the control when the hidden platform was removed in the reversal probe test. The following visible platform test showed that the impairments of the Ezh2 icKO mice in spatial learning and memory were not due to the differences in swim speed or visual ability (data not shown). These data suggest that Ezh2 is highly correlated with reversal learning and memory.
Inducible deletion of Ezh2 affects contextual fear memory
Previous studies have shown that adult hippocampal neurogenesis may also be involved in contextual fear conditioning (Saxe et al., 2006; Winocur et al., 2006). To test whether the Ezh2 icKO mice were deficient in contextual fear stimulation, a cohort of mice, 4 weeks after tamoxifen injection, was trained according to the following process: exploration for 2 min, sound presentation for 30 s, shocking for the last 2 s of the sound presentation, and rest for 30 s (Fig. 8A). Interestingly, the freezing percentage of the Ezh2 icKO mice was significantly decreased compared with the control mice in the contextual test, indicating that the deletion of Ezh2 impaired the formation of contextual memory caused by background (Fig. 8B,C; F(1,18) = 8.213, p = 0.01). The tone-cued memory test showed that the freezing time of the Ezh2 icKO mice was also decreased compared with the control mice, suggesting that the contextual memory caused by the tone was also ablated in the Ezh2 icKO mice (Fig. 8B,D; F(1,18) = 5.097, p = 0.038). Furthermore, the open-field test showed that the Ezh2 icKO mice had no defects in vision or mobility. Collectively, these results showed that the deletion of Ezh2 affects the formation of contextual memory generated by the background or the tone.
Ezh2 icKO mice are deficient in pattern separation
Pattern separation is a difficult form of spatial learning and memory that has been associated with the SGZ (Guo et al., 2011). To illustrate the effect of Ezh2 on pattern separation, the Ezh2 icKO mice and their littermate controls were subjected to the radial arm maze pattern separation experiment (Fig. 8E,F). The frequency of the Ezh2 icKO mice that found the correct arm was less than the control mice in both separations 2 and 4 (Fig. 8G; F(1,20) = 17.922, p < 0.001 in separation 2 and F(1,20) = 12.670, p = 0.002 in separation 4). These data showed that the Ezh2 icKO mice have a deficit in pattern separation.
Discussion
NSCs are a class of cells that is capable of self-renewal and can give rise to various neural lineages, such as neurons, astrocytes, and oligodendrocytes. The progression from NSCs to functional neurons is known as neurogenesis, and this process involves the proliferation of the NSCs/progenitor cells, their differentiation into neurons, and the integration of the new neurons into the existing neural circuitry. In the adult brain, neurogenesis is thought to play an important role in maintaining cognitive functions, such as learning, memory, and spatial pattern separation. Epigenetic regulations have been shown to be crucial for NSC maintenance and differentiation. For example, loss of MBD1 leads to a reduction in adult neurogenesis and impaired spatial learning (Zhao et al., 2003). Additionally, PcG-mediated histone modification and DNA methylation have critical roles in maintaining NSCs. However, as an important component of the PcG complex, the role of Ezh2 in adult neurogenesis is largely unknown.
Here, we are the first to report the crucial function of Ezh2 in adult neurogenesis, learning, and memory. Our results showed that Ezh2 is expressed in active progenitor cells but not in quiescent NSCs. The role of Ezh2 in the regulation of progenitor proliferation was detected both in vitro and in vivo. In the absence of Ezh2, progenitor cells showed an impaired capability to proliferate and give rise to new neurons. Our findings also revealed that Ezh2 regulates progenitor cell proliferation by regulating the Pten-Akt-mTOR signaling pathway. Ezh2 icKO ultimately resulted in impaired spatial learning and memory, contextual fear memory, and pattern separation (Fig. 8H). Together, these data indicate that Ezh2 is an important regulator of progenitor proliferation and neurogenesis.
Our studies may shed light on the mechanism behind the Ezh2 regulation in progenitor proliferation. As an important epigenetic regulator, Ezh2 can trimethylate lysine 27 of histone H3, leading to the silencing of specific target genes. One target gene, Pten, negatively regulates NSC proliferation in adult neurogenesis. Conditional deletion of Pten in adult NSCs in the subependymal zone can enhance the self-renewal ability of NSCs and leads to constitutive neurogenesis in the olfactory bulb (Gregorian et al., 2009). Another study showed that Pten deletion in adult NSCs in the SGZ results in increased proliferation (Amiri et al., 2012). Similarly, we found decreased BrdU-labeled or EdU-labeled cells when Ezh2 was knocked down or knocked out in vivo or in vitro. Pten deletion in granule neurons resulted in increased soma, apical dendrites, and spine density (Bonaguidi et al., 2011; Pun et al., 2012). In our study, no obvious aberrant newborn neuron morphology was observed in Ezh2 deleted granule neurons. Perhaps, the upregulation of Pten caused by Ezh2 deletion has no obvious effect on newborn neuron development. A previous report showed that Ezh2 is required for Pten downregulation in hematopoietic stem cells (Yoshimi et al., 2011). The deletion of Pten in hematopoietic stem cells leads to their short-term expansion but results in their depletion in the long term (Yilmaz et al., 2006). Our results further demonstrated that Ezh2 also promoted the expansion of progenitor cells by suppressing Pten and increasing Akt-mTOR signaling.
Both in vitro and in vivo data consistently support the hypothesis that Ezh2 deletion decreased progenitor proliferation. Whether inactivation of Ezh2 leads to aberrant differentiation of NSCs is unknown. In vitro, Ezh2 was reported to promote neuronal differentiation in embryonic NSCs (Sher et al., 2008). However, a significant decrease in the number of neurons labeled by BrdU in the Ezh2 icKO mice was observed in our study, indicating the deficient progenitor proliferation caused by Ezh2 deletion impaired the neurogenesis in the adult hippocampus. Such results may be caused by the differences in the number of original progenitor cells and the different survival conditions. In vitro, the same initial number of progenitor cells was plated and cultured in differentiation medium to investigate the role of Ezh2 in NSC differentiation. However, the deletion of Ezh2 in vivo resulted in a significantly reduced number of progenitors. Therefore, the reduction in neuron production in vivo was mainly caused by the decreased number of NSCs. Meanwhile, the differences in growth conditions in vivo and in vitro may also lead to divergence in neuron production. In fact, lineage-restricted neural progenitor cells may alter their properties after stimulation with growth factors in vitro (Stiles, 2003); therefore, there may be a slight difference between these two conditions.
Progenitor proliferation and neurogenesis defects associated with Ezh2 deletion may contribute to a fraction of the symptoms of Weaver's syndrome, which has been correlated with an Ezh2 mutant. Characteristics of Weaver's syndrome include brain abnormalities and learning/memory disabilities (Cohen, 2003). In our study, Ezh2-null NSCs/progenitors could not efficiently proliferate or differentiate into neurons, leading to memory defects and providing a possible molecular and cellular mechanism of Weaver's syndrome.
Furthermore, Ezh2-null mice exhibited impaired spatial learning and memory, contextual fear memory, and pattern separation. The impaired learning and memory of the Ezh2 knock-out mice could be attributed to the decreased proliferation of the progenitor cells. Interestingly, Ezh2 affected only reversal learning and memory, which indicates that Ezh2 may be correlated with a complex cognition that requires an active form of forgetting a prior memory. These results might provide hints about the learning and memory disabilities of individuals with neurological diseases. Our data provide the first evidence for a behavioral function of Ezh2 in the adult brain. In the larger scheme, it will be important to screen for drugs that can manipulate Ezh2 activity to treat neurological disorders related to learning and memory defects.
Footnotes
This work was supported by grants from the National Key Basic Research Program of China (2014CB964903 and 2014CB964602), the National Science Foundation of China (31371477 and 31300894), the Hundreds Talent Program, and the Strategic Priority Research Program (XDA01020301). We are grateful to Dangsheng Li for critical comment and discussion, members of the Jiao lab for discussion, Shiwen Li for technical assistance, Lei Zhou for mice behavior technical help, Stuart Orkin for providing Ezh2f/f mice, and Amelia Eisch for Nestin-CreERT2 mice.
The authors declare no competing financial interests.
- Correspondence should be addressed to Jianwei Jiao, PhD, Principal Investigator, Group of Neural Stem Cell and Neurogenesis, Institute of Zoology, Chinese Academy of Sciences, 1 Beichen West Road, Chaoyang District, Beijing 100101, P.R. China. jwjiao{at}ioz.ac.cn