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Research Articles, Cellular/Molecular

Genome-Wide Analysis of Differential Gene Expression and Splicing in Excitatory Neurons and Interneuron Subtypes

Melanie A. Huntley, Karpagam Srinivasan, Brad A. Friedman, Tzu-Ming Wang, Ada X. Yee, Yuanyuan Wang, Josh S. Kaminker, Morgan Sheng, David V. Hansen and Jesse E. Hanson
Journal of Neuroscience 29 January 2020, 40 (5) 958-973; DOI: https://doi.org/10.1523/JNEUROSCI.1615-19.2019
Melanie A. Huntley
1Departments of Bioinformatics and Computational Biology, and
2Neuroscience, Genentech, Inc., South San Francisco, California 94080-4918
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Karpagam Srinivasan
2Neuroscience, Genentech, Inc., South San Francisco, California 94080-4918
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  • ORCID record for Karpagam Srinivasan
Brad A. Friedman
1Departments of Bioinformatics and Computational Biology, and
2Neuroscience, Genentech, Inc., South San Francisco, California 94080-4918
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Tzu-Ming Wang
2Neuroscience, Genentech, Inc., South San Francisco, California 94080-4918
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  • ORCID record for Tzu-Ming Wang
Ada X. Yee
2Neuroscience, Genentech, Inc., South San Francisco, California 94080-4918
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Yuanyuan Wang
2Neuroscience, Genentech, Inc., South San Francisco, California 94080-4918
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Josh S. Kaminker
1Departments of Bioinformatics and Computational Biology, and
2Neuroscience, Genentech, Inc., South San Francisco, California 94080-4918
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Morgan Sheng
2Neuroscience, Genentech, Inc., South San Francisco, California 94080-4918
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David V. Hansen
2Neuroscience, Genentech, Inc., South San Francisco, California 94080-4918
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  • ORCID record for David V. Hansen
Jesse E. Hanson
2Neuroscience, Genentech, Inc., South San Francisco, California 94080-4918
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Article Information

DOI 
https://doi.org/10.1523/JNEUROSCI.1615-19.2019
PubMed 
31831521
Published By 
Society for Neuroscience
History 
  • Received July 8, 2019
  • Revision received October 17, 2019
  • Accepted December 3, 2019
  • First published December 12, 2019.
  • Version of record published January 29, 2020.
Copyright & Usage 
Copyright © 2020 the authors

Author Information

  1. Melanie A. Huntley1,2,
  2. Karpagam Srinivasan2,
  3. Brad A. Friedman1,2,
  4. Tzu-Ming Wang2,
  5. Ada X. Yee2,
  6. Yuanyuan Wang2,
  7. Josh S. Kaminker1,2,
  8. Morgan Sheng2,
  9. David V. Hansen2, and
  10. Jesse E. Hanson2
  1. 1Departments of Bioinformatics and Computational Biology, and
  2. 2Neuroscience, Genentech, Inc., South San Francisco, California 94080-4918
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Author contributions

  1. Author contributions: M.A.H., J.S.K., M.S., D.V.H., and J.E.H. designed research; M.H., B.A.F., T.-M.W., A.X.Y., Y.W., and J.E.H. analyzed data; M.H. and J.E.H. wrote the paper; K.S., T.-M.W., A.X.Y., and Y.W. performed research; K.S., B.A.F., T.-M.W., A.X.Y., J.S.K., M.S., and D.V.H. edited the paper.

Disclosures

    • Received July 8, 2019.
    • Revision received October 17, 2019.
    • Accepted December 3, 2019.
  • We thank Zora Modrusan for help with library preparation and RNA sequencing.

  • Conflict-of-interest: all authors are current or former employees of Genentech.

  • Correspondence should be addressed to Melanie A. Huntley at huntley.melanie{at}gene.com or Jesse E. Hanson at hanson.jesse{at}gene.com

Other Version

  • previous version (December 12, 2019).
  • You are viewing the most recent version of this article.

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The Journal of Neuroscience: 40 (5)
Journal of Neuroscience
Vol. 40, Issue 5
29 Jan 2020
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Genome-Wide Analysis of Differential Gene Expression and Splicing in Excitatory Neurons and Interneuron Subtypes
Melanie A. Huntley, Karpagam Srinivasan, Brad A. Friedman, Tzu-Ming Wang, Ada X. Yee, Yuanyuan Wang, Josh S. Kaminker, Morgan Sheng, David V. Hansen, Jesse E. Hanson
Journal of Neuroscience 29 January 2020, 40 (5) 958-973; DOI: 10.1523/JNEUROSCI.1615-19.2019

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Genome-Wide Analysis of Differential Gene Expression and Splicing in Excitatory Neurons and Interneuron Subtypes
Melanie A. Huntley, Karpagam Srinivasan, Brad A. Friedman, Tzu-Ming Wang, Ada X. Yee, Yuanyuan Wang, Josh S. Kaminker, Morgan Sheng, David V. Hansen, Jesse E. Hanson
Journal of Neuroscience 29 January 2020, 40 (5) 958-973; DOI: 10.1523/JNEUROSCI.1615-19.2019
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Keywords

  • interneuron
  • psychiatric
  • PV
  • splicing
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