RT Journal Article SR Electronic T1 Characteristics of the Cation Cotransporter NKCC1 in Human Brain: Alternate Transcripts, Expression in Development, and Potential Relationships to Brain Function and Schizophrenia JF The Journal of Neuroscience JO J. Neurosci. FD Society for Neuroscience SP 4929 OP 4940 DO 10.1523/JNEUROSCI.1423-13.2014 VO 34 IS 14 A1 Yukitaka Morita A1 Joseph H. Callicott A1 Lauren R. Testa A1 Michelle I. Mighdoll A1 Dwight Dickinson A1 Qiang Chen A1 Ran Tao A1 Barbara K. Lipska A1 Bhaskar Kolachana A1 Amanda J. Law A1 Tianzhang Ye A1 Richard E. Straub A1 Daniel R. Weinberger A1 Joel E. Kleinman A1 Thomas M. Hyde YR 2014 UL http://www.jneurosci.org/content/34/14/4929.abstract AB Early in development, GABA, an inhibitory neurotransmitter in adults, is excitatory. NKCC1 (SLC12A2) encodes one of two cation chloride cotransporters mediating the conversion of GABA from excitatory to inhibitory. Using 3′ and 5′ RACE and PCR, we verified previously characterized alternative transcripts of NKCC1a (1–27) and NKCC1b (1–27(Δ21)), identified new NKCC1 transcripts, and explored their expression patterns during human prefrontal cortical development. A novel ultra-short transcript (1–2a) was expressed preferentially in the fetus. Expression of NKCC1b and 1–2a were decreased in schizophrenia compared with controls (NKCC1b: 0.8-fold decrease, p = 0.013; 1–2a: 0.8-fold decrease, p = 0.006). Furthermore, the expression of NKCC1b was associated with NKCC1 polymorphism rs3087889. The minor allele at rs3087889, associated with reduced NKCC1b expression (homozygous for major allele: N = 37; homozygous for minor allele: N = 15; 1.5-fold decrease; p < 0.01), was also associated with a modest increase in schizophrenia risk in a case-control sample (controls: N = 435; cases: N = 397, OR = 1.5). This same allele was then found associated with cognitive (n = 369) and fMRI (n = 313) intermediate phenotypes associated with schizophrenia—working memory (Cohen's d = 0.35), global cognition or g (d = 0.18), and prefrontal inefficiency (d = 0.36) as measured by BOLD fMRI during a working memory task. Together, these preclinical and clinical results suggest that variation in NKCC1 may increase risk for schizophrenia via alterations of mRNA expression at the molecular level and impairment of optimal prefrontal function at the macro or systems level.