Table 1.

Genes expressed by embryonic and postnatal hair cells, postnatal hair cells, cochlear hair cells, and utricular hair cells as shown in Fig. 6

Embryonic and postnatal hair cells							Postnatal hair cells						Cochlear hair cells	Utricular hair cells
Brunol6	Eml1	Capsl	Fam70b	Clec18a	Frmd4b		Ifit1	Slc25a33	Fsip1	Unc80	Slc16a5		Sgip1	Irx2	Gas2l2
Fam167a	Cyb561	Fam154b	Gfi1^{^a}	Slc18a1	Twf2		Lcn14	1190002A17Rik	Pls1	4932417I16Rik	Tspyl5		Sycp2	Tctex1d1	Tekt4
Wdr31	Tspan13	A330021E22Rik	Lhx3^{^a}	Dyx1c1	Tpbpb		Cyp17a1	C2cd2l	Nfkbib	Nos1ap	Ccdc40		Calca	4732456N10Rik	Ddo
Eya4	Gabrb3	Fam183b	Acsl4	Kcns3	Dytn		Tas1r1	C130038G02Rik	Fam148c	Lrrc67	Rpgrip1l		Dusp27	Foxj1	Gal
Impdh1	Gpr98^{^a}	1700007K13Rik	Cdkl4	Pih1d2	Myot		Tmem213	Morn2	Tmem173	Myo15^{^a}	Rsph4a		Adck1	1810041L15Rik	1700026L06Rik
Dach2	Cib2^{^a}	Armc4	B230396O12Rik	Ribc2	Dock9		Stk32c	Zfr2	4930429B21Rik	Adcy8	Ip6k3		Grtp1	Abcd2	Cyp1a2
Rassf10	St8sia3	Lrrc46	Ttc24	B4galt5	BC048546		A530016L24Rik	Selm	Pip4k2a	D10Bwg1379e	Zcchc18		Icos	D11Bwg0517e	Ptpn22
Mpp7	Ttc21a	Wdr78	Casz1	Gm5567	Kncn		Zmynd12	Sema6b	Jakmip1	Ttc30b	Lbxcor1		Cdh7	Wt1	6330439K17Rik
Frmd5	Snap91	Mtap9	Gm906	C230081A13Rik	Nod2		Bend6	Tuba4a	Ablim2	Txndc6	Tspan2		Slc34a3	Ccdc151	Kif6
Pkp2	Parp6	Kcnh7	Chgb	Kifap3	Dbndd1		Ttll3	Immp2l	Mtap7	Ryr2	4930528F23Rik		Ucp3	Dscam	Slc17a8
Fez1	Tspyl4	Ccdc68	Lmod1^{^b}	Pgm2l1	Hist3h2ba		Amph	Tnfaip8l1	Spock1	Wdr16	1110004E09Rik		Klrk1	Tmem130	4430402I18Rik
Me2	Wwc1	Wdr63	Rab11fip1	Wdr19	Nupl2		Accn3	Fzd6	Acpp	Agbl4	Awat2		Slc39a12	1700028P14Rik	Id4
Slc6a17	Prepl	Tcp11	Mfsd6	Sp110	Ppp1r3f		Nat14	Tceal5	Elfn1	Dnajb13	Slc5a12		Acad11	Ccdc113	Irak2
Ankrd24	Raver2	Chrna9^{^a}	Plce1	Phtf1	Rabl2a		Stxbp1	1700030J22Rik	5730410E15Rik	Dysfip1	Rph3a		Pkhd1l1	Fbxo32	Ces2
Fam148b	Txnrd1	Cldn9	Myo6^{^a}	Gm88	Hrasls		0610010O12Rik	Uhmk1	Clic5^{^a}	6430537H07Rik	Ugp2		Defb5	Brip1	Gm595
Cabp4	Ctnnd2	Dtna	Smpx	Serf1	Slc4a8		Hagh	Dyrk3	Rnf128	Tekt1	Sgsm1		Fabp12	Dnahc5^{^b}	Lrrc27
Fam92b	Tmtc4	A730017C20Rik	Acss2	Ankrd42	Lmo3		Mmp24	Rem2	Ccdc30	Cxcl14	Lrtm2		Ghsr	Ccdc147	Ulk4
Dner	Myo16	Enkur	Atp6v1a	Tctn2	Rab36		Chchd10	Clstn3	Mycbp	Lrguk	Ubxn11		Gpr55	Rab3c	Car8
Cetn4	Epb4.1l5	Tmem30b	Ankrd22	Ttll7	Nrip3		Ctsf	Fbxo27	Osbpl3	4933413G19Rik	Fcho1		Slc9a2	Rxfp2	4932443I19Rik
4930588N13Rik	Syt14	Ush1g^{^a}	Dusp14	Dmxl2	Ubxn10		Mrps6	1810019J16Rik	Rtdr1	Nhlrc2	Tmc1^{^a}		Fhit	Tekt2	Slc15a5
Morn5	2310030G06Rik	Spag6	Lrp11	Thnsl1	Igsf21		Rsph9	Mtmr7	Vwa3a	Otof^{^a}	Pcp4		Kndc1	Nxf3	Styxl1
Fbxo16	R3hdml	Zfp474	Gm1322	Thsd7b	Megf11		Morn1	1700040I03Rik	Relt	1700003M02Rik	Arv1		Fam160a1	1700019L03Rik	Gm14461
Spint1	Spa17	Atp11a	Xirp2^{^a}	Dgkg	Syp		2210020M01Rik	Crb3	Wee2	Scn3b	Strc^{^a}		Gcnt2	Fhad1	Mdh1b
Ssx2ip	Ppp1r3d	4930430F08Rik	Cpeb3	4930426L09Rik	Erc2		Efhc1	Nphp4	Kcna10^{^a}	Chrnb2	Mtmr11		Htr1a	Gm114	Csmd1
Fmn1	Rimklb	Ercc6	Gramd1c	Gm70	Pcdha2		Rsph1	Gnmt	Bcl2l14	Ccdc65	Trim45		Slc39a2	Plac1l	Trim9
Atp8b1	2900062L11Rik	Pacrg	Kcnab2	Artn	Ldhc		Fry	Gpr120	Tbc1d7	Ccdc96	Cd164l2		Adamts13	4930506M07Rik	Popdc3
2310030N02Rik	Herc3	Ap3m2	Nek11	Tmem184a	C77080		Nmnat3	Nipal3	Serpina3g	Fbxo36	Cyp4f39		Xkr9	Hopx	4732415M23Rik
Mllt4	Ica1l	Dynlrb2	Tomt^{^a}	Mobkl2b	Ppm1e		Veph1	Tjap1	1700061J05Rik	Sh3gl2	Arf3		D630029K05Rik	Perp	Lrrc51
Pawr	Ildr1	Dctn3	Fam65b	Plch2			Cpne9	Gsg1	Ankfn1	Meig1	Pkig		Gm4371	Dera	Arid3c
Rnf182	Rdh12	Hspa4l	3110043O21Rik	Fam19a3			Htatip2	Tmem216	Pou4f2	Lrrc43	Gm9047		Cyp2j12	Nkx3–1	Casc1
Ptprn2	Akap9	Myo3b	Gdpd1	Pgam2			Fbxo2	Fbxo15	Cacna2d4	4930434E21Rik	Hsd17b7		S100g	LOC100042450	Dydc2
Zdhhc13	4932425I24Rik	Mgst3	Mcf2l	Unc79			Cgn	Lbx2	Dnaja4	4930579J09Rik	Rab3ip		Syt6	Ptchd3	Liph
Hook1	Ldb3^{^b}	Ptprq^{^a}	Tmem183a	Pvrl1			Rabl5	Clip4	Eno2	1700003E16Rik	Aftph		Mycbpap	Dnahc11
Lrp8	Arl6	Msrb3	Galnt9	Sgpp2			Rab3a	Kif27	Cds1	E230025N22Rik	Hsd17b14		Calb1^{^a}	Crtac1
Sall3	Prph2	Chst4	Gm757	Crtam			Cln6	Rab3b	Cyb561d2	1700024G13Rik	Cdk5rap2		Fam40b^{^b}	1700013F07Rik
Syt7	Cyfip2	Cyld	Ccdc103	Grp			Ormdl3	Cacna1d	Trpm2	Ccdc87	5730508B09Rik		Sema5b	Kcne2
Vwa5b2	Lmo7	Gm5111	Fscn2^{^a}	Rffl			Stard10	Tom1l2	1110032A03Rik	Cyb5r2	4930558C23Rik		Rassf4	Tnr
Espn^{^a}	Strbp	Myo3a^{^a}	Calm2	Acsl6			5930434B04Rik	Gad2	Krt222	Armc3	Tmprss7		Snph	1810046K07Rik
Mtag2	Trit1	Faim2	Rnf157	Mfng			Wbp1	Pcsk1	2610034M16Rik	Efcab6	Nceh1		Tesc	Zbbx
Clrn1	4921525H12Rik	Pitpna	1700009P17Rik	Btbd9			Rhpn1	Aacs	Gstm7	E230019M04Rik	2510049J12Rik		Umodl1	Gm101
Sult4a1	Evl	Calml4	Kif9	Acot7			Aig1	1700017N19Rik	Cnnm2	Tekt3	Epn3		Scn1b	Ak7
Myt1	Rims2	Chrna10	Lhfpl4^{^a}	Chchd6			2310047B19Rik	Chia	Adprhl1	Ankrd5	Elovl4		1190003J15Rik	Slc17a2
Nhlh1	Nefm	Calm1	Otud3	Gpr4			Usp20	Dpf3	Fcrlb	Ccdc11	Cdh15		Lmod3^{^b}	Ccdc19
Hpcal1	Slc8a1	Pou4f3^{^a}	Atad4	Neurl1a			Hist3h2a	Fgf21	Kcnj4^{^a}	Dnali1	Cdkl1		Slc26a5^{^a}	Zcchc12
Tcerg1l	Nrxn3	Camk2b	Rab15	2210411K11Rik			Zfp385a	Nppa	Calb2^{^a}	Gca	Ttc39b		Zfp750	Krt20
Cbln1	Pcdh15^{^a}	Tmhs^{^a}	Eps8l2	Nup210			Padi2	Shank2	Chrna1^{^a}	Gm11992	Wdr7		Rimbp2	Gbx2
Kcnmb2	5330437I02Rik	Gpr152	Gpr156	Hs3st6			St3gal5	Ccdc60	Apbb3	6030429G01Rik	S100a1		Actr3b	Lct
Lmo1	Ube2u	Ap3b2	Lrrc48	Ubash3b			Gm166	Fhod3	Fabp1	Ccdc108	Slc7a4		Baiap2l2	Zp3
Tmem41a	Barhl1^{^a}	Espnl^{^a}	Fam78b	Pcyt1b			Ptpla	Ksr2	Abcc8	Dnahc9	Tmprss3		Gpr151	Gck
Stmn3	Dlk2	Acbd7	Grxcr1^{^a}	Prkcz			Coq4	Lipm	Lrba	Dnajc5b	Sh2d7		Parp1	Stox1
Disp2	Ush2a^{^a}	Apba1	Anxa4	Uckl1			Ica1	Btn2a2	4930579G22Rik	1700012P22Rik	Myo7a^{^a}		Chst13	1700026D08Rik
Ckmt1	Nrsn1	Fank1	Mogat1	Brsk2			Nf2	Fn3k	4930455F23Rik	Nek5	Tmem107		Gng8	Prr15
Gdap1l1	Mreg	Me1	Hebp2	Scg3			Slc24a3	Colq	Grxcr2^{^b}	Cartpt	Ptplad1		Htr3a	Lrrc18
Snap25	Dscaml1	Cdkl2	Emb	Sncg			S100a13	B3gnt4	AI428936	Lrriq1	Slc9a9		Mcoln3	Mlc1
Hecw1	Chga	Cetn2	Klhl32	Dll4			Paqr9	Cdh23^{^a}	Lrrc30	Ccdc135	Tmcc2		4432412L15Rik	Spag16
Mycl1	Mgat5b	Fam49a	Stac	Rem1			Defb25	Bbs1	Car7	Agbl2	Nbas		Pftk2	Dnahc10
Six1	1500001A10Rik	Pak3	Scg5	2310076L09Rik			Cpeb4	Myl3	Tmem179	D130043K22Rik	Gm705		B3galt5	Dmkn
Brsk1	Gdap1	Nme5	Hspa2	Hist2h3c2			Ocm^{^a}	Tmie^{^a}	Pcsk9	1700001L19Rik	Sh2d4b		Dnase1	Trdn
Ano3	Trim36	Efcab10	Trappc2	Ccdc92			3110006E14Rik	6430571L13Rik	Ptpn3	Mapk15	Card10			Art1
Clps	Chrng^{^a}	1700016K19Rik	Ap1m2	Trim71			Cldn14	Rrp12	Ppp1r14d	Hydin	Rab25			Plcxd2
Glt28d2	Rasd2	Ttc29	Atp10d	Sall1			Trnp1	Maneal	4930470P17Rik	Krt7	Tmem8			Ccdc33
Phtf2	Jag2^{^a}	Slc8a2	Galnt13	Zfp697			Tmprss6	Tppp	Mslnl	Lrrc6	Dlg2			Tpo
Lnx2	Dfnb59	Mlf1	BC030867	Ly6 h			Atp1b1	Prrt3	D7Ertd443e	Scn11a	1700001C02Rik			2300009A05Rik
Nefl	Skp1a	Elmod1^{^a}	Usp46	Mtap2			Nme7	Dlgap3	Zfp365	Necab1	Cabp2			2310021H06Rik
Atp2b2	2310046K01Rik	Gm904	Arhgdig	Synj2		Srd5a1	Iqcg	Pclo	Plekhf2	Cpe		D630023F18Rik
Pvalb^{^a}	Atoh1^{^a}	1700027A23Rik	Cacnb2	Rgs11		Ablim3	Lrrc56	Spef2	Mak	Dynll2		Dbpht2
Oscp1	4932411E22Rik	Gm1060	Kcnb1	Tcte2		Atp2a3	Gpx2	Dnaic2	Iqub			Gm879

Genes near each other in a column have similar expression patterns during development.
↵^aGenes well known in the inner ear.
↵^bGenes validated here by ISH or immunostaining (Figs. 6 and 7).