Solution structure of the extended neuronal nitric oxide synthase PDZ domain complexed with an associated peptide

Nat Struct Biol. 1999 May;6(5):417-21. doi: 10.1038/8216.

Abstract

The PDZ domain of neuronal nitric oxide synthase (nNOS) functions as a scaffold for organizing the signal transduction complex of the enzyme. The NMR structure of a complex composed of the nNOS PDZ domain and an associated peptide suggests that a two-stranded beta-sheet C-terminal to the canonical PDZ domain may mediate its interaction with the PDZ domains of postsynaptic density-95 and alpha-syntrophin. The structure also provides the molecular basis of recognition of Asp-X-Val-COOH peptides by the nNOS PDZ domain. The role of the C-terminal extension in Asp-X-Val-COOH peptide binding is investigated. Additionally, NMR studies further show that the Asp-X-Val-COOH peptide and a C-terminal peptide from a novel cytosolic protein named CAPON bind to the same pocket of the nNOS PDZ domain.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptor Proteins, Signal Transducing*
  • Amino Acid Sequence
  • Amino Acids / chemistry
  • Amino Acids / metabolism
  • Animals
  • Binding Sites
  • Carrier Proteins / chemistry
  • Carrier Proteins / metabolism
  • Dimerization
  • Models, Biological
  • Models, Molecular
  • Molecular Sequence Data
  • Nitric Oxide Synthase / chemistry*
  • Nitric Oxide Synthase / metabolism
  • Nitric Oxide Synthase Type I
  • Nuclear Magnetic Resonance, Biomolecular
  • Peptide Fragments / chemistry
  • Peptide Fragments / metabolism*
  • Protein Binding
  • Protein Conformation
  • Protein Structure, Secondary
  • Rats
  • Receptors, Cell Surface / chemistry
  • Receptors, Cell Surface / metabolism
  • Receptors, Cytoplasmic and Nuclear / chemistry
  • Receptors, Cytoplasmic and Nuclear / metabolism
  • Receptors, Melatonin
  • Solutions

Substances

  • Adaptor Proteins, Signal Transducing
  • Amino Acids
  • Carrier Proteins
  • NOS1AP protein, rat
  • Nos1ap protein, mouse
  • Peptide Fragments
  • Receptors, Cell Surface
  • Receptors, Cytoplasmic and Nuclear
  • Receptors, Melatonin
  • Solutions
  • Nitric Oxide Synthase
  • Nitric Oxide Synthase Type I
  • Nos1 protein, rat

Associated data

  • PDB/1B8Q