The Longhorn Array Database (LAD): an open-source, MIAME compliant implementation of the Stanford Microarray Database (SMD)

BMC Bioinformatics. 2003 Aug 20:4:32. doi: 10.1186/1471-2105-4-32. Epub 2003 Aug 20.

Abstract

Background: The power of microarray analysis can be realized only if data is systematically archived and linked to biological annotations as well as analysis algorithms.

Description: The Longhorn Array Database (LAD) is a MIAME compliant microarray database that operates on PostgreSQL and Linux. It is a fully open source version of the Stanford Microarray Database (SMD), one of the largest microarray databases. LAD is available at http://www.longhornarraydatabase.org

Conclusions: Our development of LAD provides a simple, free, open, reliable and proven solution for storage and analysis of two-color microarray data.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Database Management Systems / instrumentation
  • Database Management Systems / standards
  • Database Management Systems / trends
  • Databases, Genetic / classification
  • Databases, Genetic / standards
  • Databases, Genetic / trends*
  • Oligonucleotide Array Sequence Analysis*