Structure of SAP18: a ubiquitin fold in histone deacetylase complex assembly

Biochemistry. 2006 Oct 3;45(39):11974-82. doi: 10.1021/bi060687l.

Abstract

Signal transduction pathways are frequently found to repress transcription of target genes in the absence of stimulation and, conversely, to upregulate transcription in the presence of a signal. Transcription factors are central in this dual regulatory mechanism and widely use a generalized mechanism to repress transcription through recruitment of a Sin3-histone deacetylase (HDAC) complex to their binding sites on DNA. The protein SAP18 (Sin3-associated polypeptide of 18 kDa) has been shown to play a key role in gene-specific recruitment of the HDAC complex by a number of transcription factors including Gli, GAGA, and Bicoid. The solution structure of SAP18 reveals a ubiquitin-like fold with several large loop insertions relative to other family members. This fold supports the functional role of SAP18 as a protein-protein adapter module and provides insight for how SAP18 may bridge the Sin3-HDAC complex to transcription factors.

MeSH terms

  • Carrier Proteins / chemistry*
  • Carrier Proteins / metabolism
  • Co-Repressor Proteins
  • Histone Deacetylases / chemistry
  • Histone Deacetylases / metabolism
  • Humans
  • Multiprotein Complexes / chemistry
  • Multiprotein Complexes / metabolism
  • Nuclear Magnetic Resonance, Biomolecular
  • Protein Folding*
  • Protein Structure, Tertiary
  • RNA-Binding Proteins
  • Transcription Factors / chemistry
  • Transcription Factors / metabolism
  • Transcription, Genetic / physiology
  • Ubiquitin / chemistry*
  • Ubiquitin / metabolism

Substances

  • Carrier Proteins
  • Co-Repressor Proteins
  • Multiprotein Complexes
  • RNA-Binding Proteins
  • SAP18 protein, human
  • Transcription Factors
  • Ubiquitin
  • Histone Deacetylases

Associated data

  • PDB/2HDE